Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 3.4e-124 448.4 231 100.0
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.8e-80 303.1 213 74.2
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 8.3e-78 294.3 238 65.1
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 1.4e-77 293.5 217 68.2
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 9.2e-77 290.8 223 67.7
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 7.8e-76 287.7 217 68.7
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.5e-74 283.5 226 65.0
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 5.6e-74 281.6 224 64.3
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.5e-74 280.8 220 67.3
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 4.7e-73 278.5 212 68.9
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 4.0e-72 275.4 234 60.3
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 6.8e-72 274.6 212 68.4
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 1.5e-71 273.5 221 65.6
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.4e-71 271.9 213 66.7
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 6.4e-70 268.1 217 62.7
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 7.0e-69 264.6 218 62.8
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 1.2e-68 263.8 220 61.8
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 1.2e-68 263.8 218 62.8
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.0e-67 260.8 223 60.5
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 1.3e-67 260.4 217 60.4
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.3e-67 260.4 216 62.0
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 6.6e-67 258.1 214 62.6
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 2.5e-66 256.1 224 60.3
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.6e-65 253.4 208 61.5
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 2.1e-65 253.1 217 60.8
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 4.7e-65 251.9 212 59.9
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 1.4e-64 250.4 217 60.4
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 1.4e-64 250.4 214 60.7
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 3.1e-64 249.2 215 58.1
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 5.8e-63 245.0 224 55.4
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 7.5e-63 244.6 217 59.4
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 9.8e-63 244.2 219 59.8
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 9.8e-63 244.2 219 59.8
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 1.3e-62 243.8 217 55.8
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 6.4e-62 241.5 219 58.9
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 1.1e-61 240.7 217 55.8
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.9e-61 240.0 222 55.0
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 3.2e-61 239.2 205 61.0
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 2.1e-60 236.5 221 58.8
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 1.5e-58 230.3 223 56.1
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 2.5e-58 229.6 223 55.2
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 3.3e-58 229.2 209 55.5
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 4.3e-58 228.8 223 55.2
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 9.5e-58 227.6 223 55.2
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 2.8e-57 226.1 210 56.7
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 2.8e-57 226.1 216 55.6
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.1e-56 224.2 225 54.2
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.4e-56 223.8 206 55.8
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.8e-56 223.4 221 54.3
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.8e-56 223.4 202 58.9
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.0e-56 222.2 221 53.8
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 4.0e-56 222.2 216 53.2
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 4.0e-56 222.2 223 54.7
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 4.0e-56 222.2 208 54.8
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 5.2e-56 221.9 226 53.1
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 6.8e-56 221.5 216 55.6
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 6.8e-56 221.5 216 55.1
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.2e-55 220.7 209 53.6
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 1.5e-55 220.3 221 53.8
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.5e-55 220.3 216 55.6
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 2.0e-55 219.9 215 54.9
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 5.8e-55 218.4 222 55.0
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 7.5e-55 218.0 216 52.3
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 9.9e-55 217.6 229 55.5
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.7e-54 216.9 223 53.8
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 2.2e-54 216.5 216 53.7
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 2.2e-54 216.5 204 54.4
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 8.3e-54 214.5 210 53.3
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 3.2e-53 212.6 211 52.6
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 7.1e-53 211.5 209 54.1
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 2.1e-52 209.9 221 52.0
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.5e-52 209.1 214 51.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 6.0e-52 208.4 211 53.6
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 7.8e-52 208.0 219 52.1
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 8.6e-51 204.5 219 50.7
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 4.3e-50 202.2 211 53.6
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 4.0e-48 195.7 205 49.8
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 7.6e-47 191.4 212 52.4
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 2.7e-44 183.0 214 48.1
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 2.7e-44 183.0 209 47.4
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 2.7e-44 183.0 211 51.7
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 6.0e-44 181.8 170 57.1
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 7.8e-44 181.4 225 46.7
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.7e-43 180.3 226 45.1
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.1e-40 171.0 130 63.8
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.8e-40 170.2 176 51.1
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 3.1e-40 169.5 167 55.1
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 5.3e-40 168.7 171 52.6
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 9.0e-40 167.9 180 48.9
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 2.0e-39 166.8 192 46.9
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 5.8e-39 165.2 132 63.6
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.9e-38 162.9 180 48.3
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.1e-37 161.0 173 48.6
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 4.2e-37 159.1 204 44.1
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 1.0e-35 154.5 141 56.0
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 5.5e-21 105.5 110 49.1
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-15 87.4 59 71.2
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.9e-14 83.2 59 67.8
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.9e-13 80.5 86 53.5
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 1.2e-12 77.8 214 31.3
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.9e-10 70.5 59 61.0
SalBow1G3448 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.3e-10 69.3 44 75.0
MCO04G533 Micromonas commoda HOM05D007546 ORTHO05D009542 1.7e-06 57.4 209 25.8


User provided reference genes

Program Settings