Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012478.1 Olea europaea HOM05D006377 ORTHO05D008001 1.5e-104 382.9 192 100.0
Oeu027050.1 Olea europaea HOM05D006377 ORTHO05D008001 4.0e-86 321.6 193 86.5
MSTRG.3650 Avicennia marina HOM05D006377 ORTHO05D008001 3.0e-65 252.3 195 67.7
CSS0017897 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 7.4e-64 247.7 199 68.3
CSS0039444 Camellia sinensis var. sinensis HOM05D006377 ORTHO05D008001 3.7e-63 245.4 199 67.3
Actinidia05760 Actinidia chinensis HOM05D006377 ORTHO05D008001 7.6e-61 237.7 202 64.9
Cc02_g31420 Coffea canephora HOM05D006377 ORTHO05D008001 1.0e-60 237.3 212 63.7
Nn2g12517 Nelumbo nucifera HOM05D006377 ORTHO05D008001 8.5e-60 234.2 201 63.7
vmacro05068 Vaccinium macrocarpon HOM05D006377 ORTHO05D008001 8.5e-60 234.2 218 61.9
Haze_04319 Corylus avellana HOM05D006377 ORTHO05D008001 1.1e-59 233.8 194 63.9
Duzib177G1058 Durio zibethinus HOM05D006377 ORTHO05D008001 1.1e-59 233.8 212 60.8
PGR004G2824 Punica granatum HOM05D006377 ORTHO05D008001 1.4e-59 233.4 210 63.3
Sc20g0000200 Simmondsia chinensis HOM05D006377 ORTHO05D008001 1.4e-59 233.4 199 63.8
Prupe.6G338600 Prunus persica HOM05D006377 ORTHO05D008001 1.9e-59 233.0 212 62.7
Cfa006472 Carpinus fangiana HOM05D006377 ORTHO05D008001 4.2e-59 231.9 194 63.9
RcHm_v2.0_Chr3g0452211 Rosa chinensis HOM05D006377 ORTHO05D008001 1.2e-58 230.3 201 61.2
PGSC0003DMG400022504 Solanum tuberosum HOM05D006377 ORTHO05D008001 1.2e-58 230.3 207 64.7
unitig_0.g1675 Utricularia gibba HOM05D006377 ORTHO05D008001 1.6e-58 229.9 194 61.9
Gorai.007G285800 Gossypium raimondii HOM05D006377 ORTHO05D008001 2.7e-58 229.2 155 74.8
Peaxi162Scf00404g00014 Petunia axillaris HOM05D006377 ORTHO05D008001 2.7e-58 229.2 195 65.6
FAN14G3144 Fragaria x ananassa HOM05D006377 ORTHO05D008001 3.6e-58 228.8 201 60.7
FAN05G4075 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.6e-58 228.4 201 60.7
Nitab4.5_0002361g0100 Nicotiana tabacum HOM05D006377 ORTHO05D008001 4.6e-58 228.4 208 64.9
Sopen01g041500 Solanum pennellii HOM05D006377 ORTHO05D008001 4.6e-58 228.4 208 62.5
EL10Ac4g09192 Beta vulgaris HOM05D006377 ORTHO05D008001 6.1e-58 228.0 199 63.8
FAN05G1987 Fragaria x ananassa HOM05D006377 ORTHO05D008001 6.1e-58 228.0 201 60.7
TWI36G1766 Tripterygium wilfordii HOM05D006377 ORTHO05D008001 7.9e-58 227.6 189 63.5
Migut.E01572 Erythranthe guttata HOM05D006377 ORTHO05D008001 1.0e-57 227.3 194 60.8
FvH4_6g03680 Fragaria vesca HOM05D006377 ORTHO05D008001 1.0e-57 227.3 201 60.2
Gohir.D11G265800 Gossypium hirsutum HOM05D006377 ORTHO05D008001 1.0e-57 227.3 203 64.0
TAR365G0273 Trochodendron aralioides HOM05D006377 ORTHO05D008001 1.0e-57 227.3 202 63.9
Nitab4.5_0002840g0030 Nicotiana tabacum HOM05D006377 ORTHO05D008001 1.8e-57 226.5 209 63.2
Solyc01g097910.2 Solanum lycopersicum HOM05D006377 ORTHO05D008001 1.8e-57 226.5 208 63.0
CsaV3_2G004360 Cucumis sativus L. HOM05D006377 ORTHO05D008001 2.3e-57 226.1 186 65.6
MD12G1236300 Malus domestica HOM05D006377 ORTHO05D008001 2.3e-57 226.1 204 62.7
MD04G1219300 Malus domestica HOM05D006377 ORTHO05D008001 3.9e-57 225.3 221 58.8
Thecc.05G289700 Theobroma cacao HOM05D006377 ORTHO05D008001 3.9e-57 225.3 208 63.0
Manes.08G127500 Manihot esculenta HOM05D006377 ORTHO05D008001 1.5e-56 223.4 208 58.7
Potri.005G049000 Populus trichocarpa HOM05D006377 ORTHO05D008001 3.3e-56 222.2 202 61.4
SalBow5G2979 Salvia bowleyana HOM05D006377 ORTHO05D008001 3.3e-56 222.2 198 60.1
Gohir.A11G256100 Gossypium hirsutum HOM05D006377 ORTHO05D008001 4.3e-56 221.9 202 62.9
CAN.G134.174 Capsicum annuum HOM05D006377 ORTHO05D008001 7.4e-56 221.1 198 64.1
ClCG02G016370 Citrullus lanatus HOM05D006377 ORTHO05D008001 9.7e-56 220.7 190 63.7
Rhsim07G0175800 Rhododendron simsii HOM05D006377 ORTHO05D008001 1.7e-55 219.9 204 60.3
CiPaw.08G178700 Carya illinoinensis HOM05D006377 ORTHO05D008001 2.2e-55 219.5 200 61.0
MELO3C004358.2 Cucumis melo HOM05D006377 ORTHO05D008001 3.7e-55 218.8 190 61.6
ECA238G1597 Erigeron canadensis HOM05D006377 ORTHO05D008001 6.3e-55 218.0 202 60.9
Lsat_1_v5_gn_2_67840 Lactuca sativa HOM05D006377 ORTHO05D008001 8.2e-55 217.6 192 61.5
QL03p023258 Quercus lobata HOM05D006377 ORTHO05D008001 1.1e-54 217.2 200 61.5
SGA_v2.0_scaffold35G13993 Striga asiatica HOM05D006377 ORTHO05D008001 1.1e-54 217.2 157 68.2
Potri.013G035700 Populus trichocarpa HOM05D006377 ORTHO05D008001 2.4e-54 216.1 200 59.0
FAN09G4008 Fragaria x ananassa HOM05D006377 ORTHO05D008001 4.1e-54 215.3 194 59.3
Aqoxy2G02484 Aquilegia oxysepala HOM05D006377 ORTHO05D008001 6.9e-54 214.5 219 57.1
HanXRQChr04g0094091 Helianthus annuus HOM05D006377 ORTHO05D008001 9.1e-54 214.2 188 62.2
QL03p023964 Quercus lobata HOM05D006377 ORTHO05D008001 1.2e-53 213.8 201 61.7
Ciclev10002532m.g Citrus clementina HOM05D006377 ORTHO05D008001 1.5e-53 213.4 207 59.9
Hma1.2p1_0332F.1_g127770 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 2.6e-53 212.6 196 60.2
Sed0019582 Sechium edule HOM05D006377 ORTHO05D008001 2.6e-53 212.6 153 71.2
FAN02G4534 Fragaria x ananassa HOM05D006377 ORTHO05D008001 7.7e-53 211.1 161 65.8
MBI19_g37073_MAGBIO Magnolia biondii HOM05D006377 ORTHO05D008001 7.7e-53 211.1 200 58.5
Aa31LG2G12300 Aethionema arabicum HOM05D006377 ORTHO05D008001 1.3e-52 210.3 199 59.3
CDE12G0044 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.7e-52 209.9 198 58.1
Ah.06g192660 Amaranthus hybridus HOM05D006377 ORTHO05D008001 3.8e-52 208.8 199 60.3
Lj1g0014721 Lotus japonicus HOM05D006377 ORTHO05D008001 5.0e-52 208.4 147 70.1
Os08g0323400 Oryza sativa ssp. japonica HOM05D006377 ORTHO05D008001 8.5e-52 207.6 170 62.4
THA.LOC104805815 Tarenaya hassleriana HOM05D006377 ORTHO05D008001 1.1e-51 207.2 211 55.0
Lalb_Chr15g0076921 Lupinus albus HOM05D006377 ORTHO05D008001 3.2e-51 205.7 180 61.1
Lj7P475T32 Lonicera japonica HOM05D006377 ORTHO05D008001 4.2e-51 205.3 196 59.2
Cpa.g.sc264.18 Carica papaya HOM05D006377 ORTHO05D008001 5.5e-51 204.9 120 79.2
PSO210G5336 Papaver somniferum HOM05D006377 ORTHO05D008001 5.5e-51 204.9 205 56.6
Medtr7g114590 Medicago truncatula HOM05D006377 ORTHO05D008001 1.6e-50 203.4 184 58.7
Zm00001eb140200 Zea mays HOM05D006377 ORTHO05D008001 2.7e-50 202.6 152 65.1
Atru.chr2.718 Acer truncatum HOM05D006377 ORTHO05D008001 3.6e-50 202.2 120 78.3
Glyma.03G245100 Glycine max HOM05D006377 ORTHO05D008001 3.6e-50 202.2 171 62.6
Thhalv10023702m.g Eutrema salsugineum HOM05D006377 ORTHO05D008001 4.7e-50 201.8 132 72.0
SpUn0001_0720 Schrenkiella parvula HOM05D006377 ORTHO05D008001 4.7e-50 201.8 190 57.9
arahy.Tifrunner.gnm1.ann1.VW98FE Arachis hypogaea HOM05D006377 ORTHO05D008001 6.1e-50 201.4 120 79.2
CARHR055600 Cardamine hirsuta HOM05D006377 ORTHO05D008001 6.1e-50 201.4 188 58.5
VMungo0540G1412 Vigna mungo HOM05D006377 ORTHO05D008001 6.1e-50 201.4 193 58.0
AL1G64910 Arabidopsis lyrata HOM05D006377 ORTHO05D008001 7.9e-50 201.1 161 63.4
Sabra05G0044300 Salix brachista HOM05D006377 ORTHO05D008001 7.9e-50 201.1 198 56.1
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 1.4e-49 200.3 191 57.1
Phvul.006G099300 Phaseolus vulgaris HOM05D006377 ORTHO05D008001 1.4e-49 200.3 192 58.9
Dinv11572 Davidia involucrata HOM05D006377 ORTHO05D008001 1.8e-49 199.9 198 60.6
PSO761G0064 Papaver somniferum HOM05D006377 ORTHO05D008001 1.8e-49 199.9 204 55.4
Zm00001eb061720 Zea mays HOM05D006377 ORTHO05D008001 1.8e-49 199.9 113 78.8
BcaB02g08603 Brassica carinata HOM05D006377 ORTHO05D008001 3.0e-49 199.1 129 75.2
Carub.0002s0934 Capsella rubella HOM05D006377 ORTHO05D008001 3.0e-49 199.1 179 59.8
Zm00001eb061690 Zea mays HOM05D006377 ORTHO05D008001 5.1e-49 198.4 113 78.8
AT1G54500 Arabidopsis thaliana HOM05D006377 ORTHO05D008001 6.7e-49 198.0 184 58.7
TPR.G7004 Trifolium pratense HOM05D006377 ORTHO05D008001 6.7e-49 198.0 182 57.7
Ca_09403_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 1.1e-48 197.2 182 59.9
Ca_30164_v3 Cicer arietinum L. HOM05D006377 ORTHO05D008001 1.1e-48 197.2 182 59.9
A04p07500 Brassica napus HOM05D006377 ORTHO05D008001 3.3e-48 195.7 178 59.6
Duzib128G0229 Durio zibethinus HOM05D006377 ORTHO05D008001 3.3e-48 195.7 167 62.3
BraA04t16445Z Brassica rapa HOM05D006377 ORTHO05D008001 5.7e-48 194.9 192 57.8
Actinidia30919 Actinidia chinensis HOM05D006377 ORTHO05D008001 9.7e-48 194.1 172 59.3
BcaC02g09303 Brassica carinata HOM05D006377 ORTHO05D008001 1.7e-47 193.4 192 56.8
C04p41160 Brassica napus HOM05D006377 ORTHO05D008001 1.7e-47 193.4 192 56.8
BolC4t25698H Brassica oleracea HOM05D006377 ORTHO05D008001 1.7e-47 193.4 192 56.8
Zm00001eb061700 Zea mays HOM05D006377 ORTHO05D008001 1.7e-47 193.4 149 62.4
Sabra13G0035000 Salix brachista HOM05D006377 ORTHO05D008001 2.2e-47 193.0 161 62.7
AUR62000968 Chenopodium quinoa HOM05D006377 ORTHO05D008001 4.8e-47 191.8 192 56.8
Zm00001eb061670 Zea mays HOM05D006377 ORTHO05D008001 4.8e-47 191.8 134 67.2
HPP92_001948 Vanilla planifolia HOM05D006377 ORTHO05D008001 8.2e-47 191.0 140 64.3
ATR0796G227 Amborella trichopoda HOM05D006377 ORTHO05D008001 7.0e-46 188.0 160 60.0
Psat5g039080 Pisum sativum HOM05D006377 ORTHO05D008001 2.6e-45 186.0 157 61.1
Zm00001eb061710 Zea mays HOM05D006377 ORTHO05D008001 2.2e-44 183.0 149 61.7
Manes.09G157000 Manihot esculenta HOM05D006377 ORTHO05D008001 3.8e-44 182.2 171 57.9
SEGI_38373 Sequoiadendron giganteum HOM05D006377 ORTHO05D008001 4.7e-42 175.3 143 62.2
unitig_748.g7013 Utricularia gibba HOM05D000757 ORTHO05D000622 3.0e-41 172.6 144 59.0
AagrBONN_evm.TU.Sc2ySwM_368.50 Anthoceros agrestis HOM05D006377 ORTHO05D008001 5.2e-41 171.8 143 58.0
AagrBONN_evm.TU.Sc2ySwM_344.5347 Anthoceros agrestis HOM05D006377 ORTHO05D008001 8.8e-41 171.0 144 58.3
AUR62004997 Chenopodium quinoa HOM05D006377 ORTHO05D008001 2.6e-40 169.5 171 56.1
Mapoly0032s0089 Marchantia polymorpha HOM05D006377 ORTHO05D008001 8.2e-39 164.5 145 54.5
Pp3c1_22450 Physcomitrium patens HOM05D006377 ORTHO05D008001 1.1e-38 164.1 137 59.9
DCAR_009137 Daucus carota HOM05D006377 ORTHO05D008001 3.5e-37 159.1 121 67.8
Pp3c2_13970 Physcomitrium patens HOM05D006377 ORTHO05D008001 7.7e-37 157.9 120 62.5
SMO137G0026 Selaginella moellendorffii HOM05D006377 ORTHO05D008001 2.9e-36 156.0 108 66.7
CBR_g55374 Chara braunii HOM05D006377 ORTHO05D008001 3.8e-36 155.6 113 61.1
AagrBONN_evm.TU.Sc2ySwM_368.3396 Anthoceros agrestis HOM05D006377 ORTHO05D008001 1.5e-35 153.7 143 49.7
Hma1.2p1_0332F.1_g127760 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 6.3e-31 138.3 149 52.3
Cre07.g315150 Chlamydomonas reinhardtii HOM05D006377 ORTHO05D008001 1.2e-26 124.0 147 42.9
MCO15G508 Micromonas commoda HOM05D006377 ORTHO05D008001 2.3e-25 119.8 109 48.6
Zm00001eb061680 Zea mays HOM05D006377 ORTHO05D008001 8.8e-25 117.9 115 49.6
PRCOL_00004455 Prasinoderma coloniale HOM05D006377 ORTHO05D008001 4.1e-22 109.0 108 48.1
Hma1.2p1_0332F.1_g127740 Hydrangea macrophylla HOM05D006377 ORTHO05D008001 1.3e-15 87.4 87 50.6
Actinidia36920 Actinidia chinensis HOM05D006377 ORTHO05D057244 8.0e-10 68.2 149 37.6


User provided reference genes

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