Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 1.5e-65 252.7 125 100.0
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 1.3e-56 223.0 120 86.7
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 6.3e-56 220.7 128 87.5
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 1.4e-55 219.5 120 86.7
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 1.3e-53 213.0 120 82.5
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 1.7e-53 212.6 120 82.5
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 2.2e-53 212.2 120 82.5
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 5.0e-53 211.1 120 82.5
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 8.5e-53 210.3 120 82.5
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.1e-52 209.9 120 82.5
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.5e-52 208.8 121 81.0
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 3.2e-52 208.4 120 82.5
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 3.2e-52 208.4 120 82.5
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 4.2e-52 208.0 120 81.7
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 4.2e-52 208.0 120 82.5
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 5.5e-52 207.6 120 80.8
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 5.5e-52 207.6 119 81.5
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 1.2e-51 206.5 120 80.0
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.6e-51 206.1 120 80.0
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.1e-51 205.7 122 76.2
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 2.1e-51 205.7 120 79.2
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 2.7e-51 205.3 120 77.5
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 2.7e-51 205.3 120 78.3
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 4.7e-51 204.5 120 77.5
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 4.7e-51 204.5 120 77.5
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 6.1e-51 204.1 120 76.7
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 6.1e-51 204.1 120 76.7
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 6.1e-51 204.1 120 76.7
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 6.1e-51 204.1 120 76.7
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 8.0e-51 203.8 120 79.2
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 8.0e-51 203.8 120 76.7
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 1.0e-50 203.4 120 75.0
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 1.0e-50 203.4 120 75.0
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 1.0e-50 203.4 120 76.7
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 1.4e-50 203.0 120 79.2
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 1.8e-50 202.6 120 75.0
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 1.8e-50 202.6 120 79.2
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 1.8e-50 202.6 120 76.7
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 3.0e-50 201.8 120 76.7
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 3.0e-50 201.8 122 74.6
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 3.0e-50 201.8 120 76.7
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 4.0e-50 201.4 120 79.2
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 5.2e-50 201.1 120 77.5
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 6.7e-50 200.7 120 75.0
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 8.8e-50 200.3 120 75.8
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 8.8e-50 200.3 120 74.2
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 1.5e-49 199.5 120 76.7
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 2.0e-49 199.1 120 77.5
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 2.6e-49 198.7 120 77.5
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 5.7e-49 197.6 120 73.3
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 5.7e-49 197.6 120 73.3
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 9.7e-49 196.8 120 74.2
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 1.7e-48 196.1 120 73.3
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 1.7e-48 196.1 121 76.0
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 2.2e-48 195.7 120 75.8
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 2.2e-48 195.7 120 71.7
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 2.2e-48 195.7 120 73.3
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 2.8e-48 195.3 120 71.7
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 3.7e-48 194.9 120 70.8
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 4.8e-48 194.5 123 74.8
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 6.3e-48 194.1 120 72.5
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 6.3e-48 194.1 120 72.5
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 1.1e-47 193.4 120 75.8
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.4e-47 193.0 121 72.7
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 1.4e-47 193.0 120 76.7
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 2.4e-47 192.2 121 71.9
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 2.4e-47 192.2 120 70.8
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 2.4e-47 192.2 131 67.2
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 2.4e-47 192.2 120 72.5
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 2.4e-47 192.2 120 71.7
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 2.4e-47 192.2 120 77.5
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 2.4e-47 192.2 120 71.7
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 3.1e-47 191.8 120 71.7
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 3.1e-47 191.8 120 70.8
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 5.3e-47 191.0 120 70.8
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 7.0e-47 190.7 120 71.7
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 7.0e-47 190.7 120 71.7
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 1.2e-46 189.9 120 73.3
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 1.2e-46 189.9 120 70.0
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.2e-46 189.9 120 75.0
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 1.6e-46 189.5 121 72.7
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 2.0e-46 189.1 120 70.8
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 2.0e-46 189.1 122 66.4
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 2.0e-46 189.1 120 71.7
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 2.7e-46 188.7 121 71.9
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 2.7e-46 188.7 121 71.9
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 2.7e-46 188.7 120 70.8
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 3.5e-46 188.3 121 71.9
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 3.5e-46 188.3 121 71.9
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 3.5e-46 188.3 121 71.9
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 3.5e-46 188.3 120 70.0
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 4.5e-46 188.0 121 71.1
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 4.5e-46 188.0 120 70.0
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 4.5e-46 188.0 120 69.2
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 4.5e-46 188.0 121 71.1
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 5.9e-46 187.6 120 70.8
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 5.9e-46 187.6 121 71.9
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 7.7e-46 187.2 121 71.1
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 1.0e-45 186.8 120 70.0
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.3e-45 186.4 121 71.1
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 1.7e-45 186.0 120 68.3
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 2.2e-45 185.7 120 70.8
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 2.2e-45 185.7 124 70.2
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.8e-45 184.9 122 71.3
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 5.0e-45 184.5 120 70.8
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 1.9e-44 182.6 120 66.7
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 4.2e-44 181.4 120 67.5
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 4.2e-44 181.4 120 70.8
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 5.5e-44 181.0 121 69.4
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 7.2e-44 180.6 120 70.0
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 1.2e-43 179.9 123 69.1
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.2e-43 179.9 123 68.3
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 1.6e-43 179.5 123 67.5
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 2.1e-43 179.1 125 66.4
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 2.1e-43 179.1 120 65.0
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 4.7e-43 177.9 120 67.5
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 1.0e-42 176.8 123 68.3
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 1.0e-42 176.8 121 70.2
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.4e-42 176.4 123 68.3
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 1.4e-42 176.4 121 71.1
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.8e-42 176.0 117 70.1
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 1.2e-41 173.3 123 67.5
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 1.5e-41 172.9 123 66.7
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.5e-41 172.9 120 65.8
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.5e-41 172.9 120 65.8
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 2.6e-41 172.2 123 66.7
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 2.6e-41 172.2 123 67.5
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 2.6e-41 172.2 123 67.5
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 2.6e-41 172.2 123 66.7
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 5.7e-41 171.0 123 66.7
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 1.7e-40 169.5 124 65.3
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 4.8e-40 167.9 121 66.1
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 4.8e-40 167.9 121 66.1
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 8.3e-40 167.2 122 62.3
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.1e-39 166.8 120 64.2
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 3.1e-39 165.2 122 62.3
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 5.4e-39 164.5 120 63.3
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 9.1e-39 163.7 120 65.0
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.0e-38 162.5 101 74.3
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 5.9e-38 161.0 179 46.9
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 5.9e-38 161.0 120 63.3
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 8.0e-35 150.6 120 62.5
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 1.8e-34 149.4 123 60.2
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 8.9e-34 147.1 120 61.7
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.4e-31 139.0 84 79.8
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 3.1e-31 138.7 125 52.0
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 4.1e-31 138.3 120 56.7
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 1.2e-30 136.7 122 54.9
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 1.6e-30 136.3 124 51.6
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 2.5e-28 129.0 120 55.8
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 7.3e-28 127.5 120 54.2
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.6e-25 119.0 120 52.5
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 5.8e-25 117.9 122 50.8
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 9.8e-25 117.1 115 53.9
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.1e-23 111.7 115 53.0
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.2e-22 110.2 113 53.1
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 6.6e-21 104.4 95 55.8
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 9.5e-20 100.5 124 46.0
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 3.4e-17 92.0 179 34.1
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 1.7e-16 89.7 109 44.0
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 2.7e-14 82.4 81 54.3
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 1.0e-13 80.5 54 64.8
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.5e-12 75.9 66 60.6
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 1.4e-07 60.1 128 32.0
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.4e-07 59.3 50 56.0


User provided reference genes

Program Settings