Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012109.1 Olea europaea HOM05D007200 ORTHO05D009030 2.6e-62 241.9 123 100.0
Sabra05G0032400 Salix brachista HOM05D007200 ORTHO05D009030 2.2e-37 159.1 104 77.9
Prupe.6G323000 Prunus persica HOM05D007200 ORTHO05D009030 1.9e-36 156.0 105 70.5
AUR62000793 Chenopodium quinoa HOM05D007200 ORTHO05D009030 5.5e-36 154.5 105 72.4
AUR62005175 Chenopodium quinoa HOM05D007200 ORTHO05D009030 5.5e-36 154.5 105 72.4
TWI12G0470 Tripterygium wilfordii HOM05D007200 ORTHO05D009030 7.1e-36 154.1 104 69.2
MD12G1216700 Malus domestica HOM05D007200 ORTHO05D009030 9.3e-36 153.7 105 70.5
Cfa006611 Carpinus fangiana HOM05D007200 ORTHO05D009030 1.2e-35 153.3 102 73.5
Ciclev10002020m.g Citrus clementina HOM05D007200 ORTHO05D009030 2.7e-35 152.1 104 69.2
Lj9C124T9 Lonicera japonica HOM05D007200 ORTHO05D009030 2.7e-35 152.1 103 72.8
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 4.6e-35 151.4 105 69.5
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 4.6e-35 151.4 105 69.5
arahy.Tifrunner.gnm1.ann1.H2XQXC Arachis hypogaea HOM05D007200 ORTHO05D009030 6.0e-35 151.0 102 71.6
arahy.Tifrunner.gnm1.ann1.PH9A9F Arachis hypogaea HOM05D007200 ORTHO05D009030 6.0e-35 151.0 102 71.6
HanXRQChr11g0339441 Helianthus annuus HOM05D007200 ORTHO05D009030 6.0e-35 151.0 104 71.2
Migut.O00553 Erythranthe guttata HOM05D007200 ORTHO05D009030 7.9e-35 150.6 101 73.3
QL03p012758 Quercus lobata HOM05D007200 ORTHO05D009030 7.9e-35 150.6 103 71.8
Lj5g0005198 Lotus japonicus HOM05D007200 ORTHO05D009030 1.0e-34 150.2 102 70.6
Haze_04164 Corylus avellana HOM05D007200 ORTHO05D009030 1.3e-34 149.8 104 70.2
Rhsim05G0141700 Rhododendron simsii HOM05D007200 ORTHO05D009030 1.3e-34 149.8 104 68.3
Aqoxy5G00700 Aquilegia oxysepala HOM05D007200 ORTHO05D009030 1.8e-34 149.4 104 71.2
Thhalv10021289m.g Eutrema salsugineum HOM05D007200 ORTHO05D009030 1.8e-34 149.4 104 67.3
RcHm_v2.0_Chr3g0455321 Rosa chinensis HOM05D007200 ORTHO05D009030 1.8e-34 149.4 103 69.9
Lj9C128T5 Lonicera japonica HOM05D007200 ORTHO05D009030 2.3e-34 149.1 102 71.6
Manes.08G119500 Manihot esculenta HOM05D007200 ORTHO05D009030 2.3e-34 149.1 104 69.2
Migut.N01991 Erythranthe guttata HOM05D007200 ORTHO05D009030 3.9e-34 148.3 101 72.3
TAR365G0906 Trochodendron aralioides HOM05D007200 ORTHO05D009030 3.9e-34 148.3 102 69.6
FAN02G4393 Fragaria x ananassa HOM05D007200 ORTHO05D009030 5.1e-34 147.9 104 68.3
Lsat_1_v5_gn_9_87521 Lactuca sativa HOM05D007200 ORTHO05D009030 5.1e-34 147.9 103 68.9
Psat6g149880 Pisum sativum HOM05D007200 ORTHO05D009030 8.7e-34 147.1 104 70.2
CANSAT54G2021 Cannabis sativa HOM05D007200 ORTHO05D009030 1.1e-33 146.7 105 67.6
ECA236G3394 Erigeron canadensis HOM05D007200 ORTHO05D009030 1.1e-33 146.7 102 67.6
Glyma.10G153100 Glycine max HOM05D007200 ORTHO05D009030 1.1e-33 146.7 102 71.6
TAR365G0308 Trochodendron aralioides HOM05D007200 ORTHO05D009030 1.1e-33 146.7 102 68.6
vmacro19623 Vaccinium macrocarpon HOM05D007200 ORTHO05D009030 1.1e-33 146.7 104 67.3
CARHR079750 Cardamine hirsuta HOM05D007200 ORTHO05D009030 1.5e-33 146.4 104 65.4
FAN05G3823 Fragaria x ananassa HOM05D000179 ORTHO05D009030 1.5e-33 146.4 105 67.6
FAN09G0829 Fragaria x ananassa HOM05D007200 ORTHO05D009030 1.5e-33 146.4 105 67.6
Sp3g04270 Schrenkiella parvula HOM05D007200 ORTHO05D009030 1.9e-33 146.0 112 63.4
GSVIVG01031113001 Vitis vinifera HOM05D007200 ORTHO05D009030 1.9e-33 146.0 104 69.2
CSS0011307 Camellia sinensis var. sinensis HOM05D007200 ORTHO05D009030 2.5e-33 145.6 104 65.4
Nn3g21404 Nelumbo nucifera HOM05D007200 ORTHO05D009030 3.3e-33 145.2 105 69.5
Nitab4.5_0009303g0010 Nicotiana tabacum HOM05D007200 ORTHO05D009030 3.3e-33 145.2 105 66.7
VMungo0720G1786 Vigna mungo HOM05D007200 ORTHO05D009030 3.3e-33 145.2 102 71.6
BcaC05g30148 Brassica carinata HOM05D007200 ORTHO05D009030 4.3e-33 144.8 104 65.4
BraA05t23030Z Brassica rapa HOM05D007200 ORTHO05D009030 4.3e-33 144.8 104 65.4
Medtr1g083110 Medicago truncatula HOM05D007200 ORTHO05D009030 4.3e-33 144.8 104 68.3
Peaxi162Scf00071g00636 Petunia axillaris HOM05D007200 ORTHO05D009030 4.3e-33 144.8 105 67.6
DCAR_001939 Daucus carota HOM05D007200 ORTHO05D009030 5.6e-33 144.4 102 67.6
AT3G05410 Arabidopsis thaliana HOM05D007200 ORTHO05D009030 7.4e-33 144.1 104 64.4
Carub.0003s0469 Capsella rubella HOM05D007200 ORTHO05D009030 9.6e-33 143.7 104 65.4
Gohir.D11G276600 Gossypium hirsutum HOM05D007200 ORTHO05D009030 9.6e-33 143.7 104 69.2
Phvul.007G196200 Phaseolus vulgaris HOM05D007200 ORTHO05D009030 9.6e-33 143.7 102 68.6
Thecc.05G310900 Theobroma cacao HOM05D007200 ORTHO05D009030 9.6e-33 143.7 104 71.2
Actinidia24645 Actinidia chinensis HOM05D007200 ORTHO05D009030 1.3e-32 143.3 102 65.7
CANSAT54G2778 Cannabis sativa HOM05D007200 ORTHO05D009030 1.3e-32 143.3 105 65.7
Ah.04g160430 Amaranthus hybridus HOM05D007200 ORTHO05D009030 1.6e-32 142.9 105 64.8
BolC5t34842H Brassica oleracea HOM05D007200 ORTHO05D000438 2.1e-32 142.5 104 64.4
Aa31LG5G15970 Aethionema arabicum HOM05D007200 ORTHO05D009030 2.8e-32 142.1 104 66.3
AL3G15960 Arabidopsis lyrata HOM05D007200 ORTHO05D009030 2.8e-32 142.1 104 64.4
Nitab4.5_0002420g0030 Nicotiana tabacum HOM05D007200 ORTHO05D009030 2.8e-32 142.1 105 65.7
PGR083G0889 Punica granatum HOM05D007200 ORTHO05D009030 2.8e-32 142.1 104 65.4
CiPaw.07G020000 Carya illinoinensis HOM05D007200 ORTHO05D009030 3.7e-32 141.7 102 67.6
PGSC0003DMG400007427 Solanum tuberosum HOM05D007200 ORTHO05D009030 3.7e-32 141.7 104 67.3
BcaC05g30124 Brassica carinata HOM05D007200 ORTHO05D009030 4.8e-32 141.4 104 63.5
BcaC05g30126 Brassica carinata HOM05D007200 ORTHO05D009030 4.8e-32 141.4 104 63.5
TPR.G6036 Trifolium pratense HOM05D007200 ORTHO05D009030 4.8e-32 141.4 104 65.4
Duzib177G0869 Durio zibethinus HOM05D007200 ORTHO05D009030 6.2e-32 141.0 104 68.3
Gohir.A11G266300 Gossypium hirsutum HOM05D007200 ORTHO05D009030 1.1e-31 140.2 104 67.3
Lalb_Chr21g0310651 Lupinus albus HOM05D007200 ORTHO05D009030 1.8e-31 139.4 102 69.6
Eucgr.B01933 Eucalyptus grandis HOM05D007200 ORTHO05D009030 2.4e-31 139.0 123 55.3
CAN.G321.37 Capsicum annuum HOM05D007200 ORTHO05D009030 5.3e-31 137.9 105 62.9
Cpa.g.sc48.76 Carica papaya HOM05D007200 ORTHO05D009030 5.3e-31 137.9 104 62.5
Gorai.007G298700 Gossypium raimondii HOM05D007200 ORTHO05D009030 1.5e-30 136.3 104 65.4
SGA_v2.0_scaffold98G29315 Striga asiatica HOM05D007200 ORTHO05D009030 1.5e-30 136.3 101 66.3
unitig_746.g26859 Utricularia gibba HOM05D004477 ORTHO05D005615 1.5e-30 136.3 101 63.4
Solyc11g008480.2 Solanum lycopersicum HOM05D007200 ORTHO05D009030 4.5e-30 134.8 104 62.5
Sopen11g004260 Solanum pennellii HOM05D007200 ORTHO05D009030 4.5e-30 134.8 104 62.5
MSTRG.27987 Avicennia marina HOM05D007200 ORTHO05D009030 1.0e-29 133.7 101 67.3
PSO832G2855 Papaver somniferum HOM05D007200 ORTHO05D009030 1.3e-29 133.3 104 62.5
Cc02_g31060 Coffea canephora HOM05D007200 ORTHO05D009030 1.7e-29 132.9 104 65.4
COL.COLO4_10491 Corchorus olitorius HOM05D007200 ORTHO05D009030 3.8e-29 131.7 104 63.5
PSO210G0998 Papaver somniferum HOM05D007200 ORTHO05D009030 4.9e-29 131.3 104 62.5
Sed0020284 Sechium edule HOM05D007200 ORTHO05D009030 1.9e-28 129.4 103 61.2
MELO3C004233.2 Cucumis melo HOM05D007200 ORTHO05D009030 2.5e-28 129.0 102 61.8
CDE02G3507 Ceratophyllum demersum HOM05D007200 ORTHO05D009030 5.5e-28 127.9 107 57.0
Atru.chr12.1493 Acer truncatum HOM05D007200 ORTHO05D009030 1.6e-27 126.3 104 59.6
CsaV3_2G006520 Cucumis sativus L. HOM05D007200 ORTHO05D009030 4.6e-27 124.8 102 59.8
THA.LOC104818708 Tarenaya hassleriana HOM05D007200 ORTHO05D009030 3.0e-26 122.1 104 58.7
Os01g0934400 Oryza sativa ssp. japonica HOM05D007200 ORTHO05D009030 6.7e-26 120.9 101 56.4
ATR0706G032 Amborella trichopoda HOM05D007200 ORTHO05D009030 2.8e-24 115.5 104 54.8
EL10Ac4g09392 Beta vulgaris HOM05D007200 ORTHO05D009030 2.8e-24 115.5 105 54.3
Zm00001eb142170 Zea mays HOM05D007200 ORTHO05D009030 4.8e-24 114.8 103 52.4
MBI19_g12813_MAGBIO Magnolia biondii HOM05D007200 ORTHO05D009030 1.4e-23 113.2 79 68.4
ClCG02G015570 Citrullus lanatus HOM05D007200 ORTHO05D009030 2.9e-21 105.5 86 58.1
HPP92_006928 Vanilla planifolia HOM05D000065 ORTHO05D001606 3.2e-20 102.1 88 54.5
Actinidia19786 Actinidia chinensis HOM05D007200 ORTHO05D009030 1.0e-13 80.5 72 54.2
SMO140G0101 Selaginella moellendorffii HOM05D007200 ORTHO05D009030 1.4e-10 70.1 103 38.8
AagrBONN_evm.TU.Sc2ySwM_228.2760 Anthoceros agrestis HOM05D007200 ORTHO05D009030 1.8e-10 69.7 103 37.9
Mapoly0092s0016 Marchantia polymorpha HOM05D007200 ORTHO05D009030 1.1e-09 67.0 101 36.6
CBR_g32304 Chara braunii HOM05D007200 ORTHO05D009030 2.2e-08 62.8 95 35.8
Pp3c2_22000 Physcomitrium patens HOM05D007200 ORTHO05D009030 1.4e-07 60.1 104 32.7
Potri.005G027100 Populus trichocarpa HOM05D007200 ORTHO05D009030 4.1e-07 58.5 41 80.5
Cre09.g389578 Chlamydomonas reinhardtii HOM05D007200 ORTHO05D009030 2.0e-06 56.2 102 31.4
AUR62032114 Chenopodium quinoa HOM05D002933 ORTHO05D007742 2.6e-06 55.8 103 28.2
AUR62039657 Chenopodium quinoa HOM05D002933 ORTHO05D007742 4.5e-06 55.1 107 29.0


User provided reference genes

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