Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 5.7e-59 230.7 117 100.0
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 2.0e-40 169.1 126 72.2
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 3.3e-38 161.8 130 66.9
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 3.7e-34 148.3 125 67.2
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 3.7e-34 148.3 125 64.0
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 1.1e-33 146.7 128 63.3
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.8e-33 146.0 125 66.4
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 1.8e-33 146.0 125 66.4
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 1.8e-33 146.0 125 66.4
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 1.2e-32 143.3 125 65.6
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 1.2e-32 143.3 125 63.2
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 1.6e-32 142.9 125 63.2
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 2.0e-32 142.5 132 60.6
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 2.7e-32 142.1 127 61.4
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.7e-32 142.1 132 60.6
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.7e-32 142.1 132 60.6
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 2.7e-32 142.1 130 60.0
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.5e-32 141.7 126 61.9
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.5e-32 141.7 126 61.9
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 4.5e-32 141.4 125 61.6
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 4.5e-32 141.4 125 62.4
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 5.9e-32 141.0 132 59.8
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 5.9e-32 141.0 132 59.8
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 7.8e-32 140.6 125 61.6
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 7.8e-32 140.6 125 64.8
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 7.8e-32 140.6 125 61.6
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 7.8e-32 140.6 132 59.1
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 1.0e-31 140.2 131 61.1
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 1.0e-31 140.2 130 63.8
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 1.3e-31 139.8 126 63.5
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 1.3e-31 139.8 130 60.0
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 1.3e-31 139.8 130 60.0
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 1.3e-31 139.8 130 61.5
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 1.7e-31 139.4 125 64.0
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 2.9e-31 138.7 125 60.0
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 3.8e-31 138.3 129 58.9
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 3.8e-31 138.3 125 63.2
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 3.8e-31 138.3 125 63.2
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 5.0e-31 137.9 125 61.6
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 5.0e-31 137.9 125 60.8
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 5.0e-31 137.9 130 58.5
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 5.0e-31 137.9 130 58.5
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 6.6e-31 137.5 125 63.2
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 6.6e-31 137.5 125 59.2
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 6.6e-31 137.5 130 59.2
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 6.6e-31 137.5 132 59.8
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 8.6e-31 137.1 132 59.1
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.1e-30 136.7 125 61.6
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 2.5e-30 135.6 125 61.6
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 3.3e-30 135.2 125 60.8
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 3.3e-30 135.2 125 59.2
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 4.3e-30 134.8 130 56.2
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 5.6e-30 134.4 126 57.9
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 5.6e-30 134.4 150 53.3
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 7.3e-30 134.0 130 56.9
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 7.3e-30 134.0 129 57.4
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 9.5e-30 133.7 130 56.9
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 9.5e-30 133.7 130 56.9
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 9.5e-30 133.7 127 56.7
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 9.5e-30 133.7 125 60.0
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 1.2e-29 133.3 131 60.3
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 2.1e-29 132.5 125 57.6
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 2.1e-29 132.5 130 57.7
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 2.1e-29 132.5 133 55.6
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 2.8e-29 132.1 130 58.5
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 3.6e-29 131.7 125 60.8
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 8.0e-29 130.6 130 54.6
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 1.0e-28 130.2 126 57.1
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 1.4e-28 129.8 131 54.2
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 1.8e-28 129.4 132 55.3
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 3.0e-28 128.6 125 55.2
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 4.0e-28 128.3 130 53.1
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 4.0e-28 128.3 131 53.4
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 6.8e-28 127.5 130 53.1
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 8.9e-28 127.1 125 56.8
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 8.9e-28 127.1 130 53.1
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 1.2e-27 126.7 131 51.9
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 2.0e-27 125.9 130 51.5
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 5.8e-27 124.4 130 51.5
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 1.3e-26 123.2 131 51.9
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 1.7e-26 122.9 131 51.9
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 1.7e-26 122.9 131 51.9
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 1.7e-26 122.9 131 51.9
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 2.9e-26 122.1 121 56.2
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 6.4e-26 120.9 126 55.6
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 1.1e-25 120.2 117 59.0
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 1.9e-25 119.4 117 53.0
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 2.4e-25 119.0 125 54.4
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 4.1e-25 118.2 128 51.6
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 2.7e-24 115.5 151 45.0
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 1.1e-22 110.2 121 56.2
FAN21G2948 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.1e-21 105.9 125 54.4
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 8.0e-21 104.0 124 47.6
Duzib132G0691 Durio zibethinus HOM05D002102 ORTHO05D008242 8.9e-20 100.5 126 51.6
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 4.4e-19 98.2 125 48.0
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 5.8e-19 97.8 132 44.7
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 6.4e-18 94.4 130 43.8
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 3.5e-16 88.6 129 45.0
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 3.5e-16 88.6 120 47.5
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 6.0e-16 87.8 63 68.3
ATR0073G005 Amborella trichopoda HOM05D002102 ORTHO05D008242 1.7e-15 86.3 123 46.3
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 1.1e-14 83.6 52 78.8
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 3.3e-14 82.0 70 52.9
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 8.1e-13 77.4 70 50.0
MD05G1242700 Malus domestica HOM05D002102 ORTHO05D004119 4.4e-11 71.6 89 49.4
BraA02t07887Z Brassica rapa HOM05D002102 ORTHO05D008242 9.9e-11 70.5 87 46.0
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 1.3e-10 70.1 70 51.4
Hund01844 Selenicereus undatus HOM05D002102 ORTHO05D008242 2.4e-09 65.9 44 70.5
Eucgr.L03440 Eucalyptus grandis HOM05D002102 ORTHO05D008242 3.2e-09 65.5 44 70.5
MD05G1242600 Malus domestica HOM05D002102 ORTHO05D008242 3.2e-09 65.5 43 79.1
Nitab4.5_0007687g0040 Nicotiana tabacum HOM05D002102 ORTHO05D008242 3.2e-09 65.5 43 72.1
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 2.1e-08 62.8 119 39.5
Nitab4.5_0001815g0140 Nicotiana tabacum HOM05D002102 ORTHO05D004119 3.5e-08 62.0 41 68.3
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 5.1e-07 58.2 93 38.7
RcHm_v2.0_Chr5g0021961 Rosa chinensis HOM05D002102 ORTHO05D008242 4.3e-06 55.1 45 60.0
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 5.6e-06 54.7 119 38.7


User provided reference genes

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