Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.7e-66 255.8 121 100.0
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 2.4e-28 129.0 129 55.0
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 4.6e-27 124.8 142 50.0
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 3.3e-25 118.6 142 46.5
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.2e-24 116.7 133 48.9
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 2.1e-24 115.9 142 45.1
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.1e-24 115.9 139 47.5
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 2.1e-24 115.9 142 46.5
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 4.7e-24 114.8 142 45.1
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 6.2e-24 114.4 129 48.8
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 6.2e-24 114.4 142 45.1
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 4.0e-23 111.7 129 48.1
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 4.0e-23 111.7 129 48.8
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 4.0e-23 111.7 142 44.4
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 4.0e-23 111.7 129 48.8
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.8e-23 110.9 129 47.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.9e-23 110.5 129 48.1
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.9e-23 110.5 129 48.1
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 8.9e-23 110.5 129 48.1
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.2e-22 110.2 129 47.3
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.2e-22 110.2 129 48.1
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.2e-22 110.2 129 47.3
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.0e-22 109.4 129 46.5
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.6e-22 109.0 126 46.8
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 2.6e-22 109.0 133 45.1
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 4.4e-22 108.2 129 46.5
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 4.4e-22 108.2 129 45.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 4.4e-22 108.2 146 43.8
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 4.4e-22 108.2 127 46.5
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 5.8e-22 107.8 129 45.7
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 9.8e-22 107.1 134 44.8
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.3e-21 106.7 129 45.7
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.3e-21 106.7 127 45.7
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.3e-21 106.7 127 45.7
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.3e-21 106.7 129 46.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.3e-21 106.7 129 42.6
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.3e-21 106.7 133 44.4
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 2.9e-21 105.5 129 45.7
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 3.7e-21 105.1 126 46.8
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 3.7e-21 105.1 129 45.0
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 3.7e-21 105.1 129 45.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.7e-21 105.1 126 47.6
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 4.9e-21 104.8 129 44.2
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 6.4e-21 104.4 126 46.8
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 6.4e-21 104.4 126 46.8
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 8.3e-21 104.0 129 44.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 8.3e-21 104.0 132 44.7
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 8.3e-21 104.0 129 45.0
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.1e-20 103.6 128 45.3
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.1e-20 103.6 129 44.2
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.1e-20 103.6 129 46.5
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 1.4e-20 103.2 129 45.0
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.9e-20 102.8 129 46.5
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 2.4e-20 102.4 133 42.9
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 3.2e-20 102.1 133 42.1
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 4.1e-20 101.7 129 42.6
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 5.4e-20 101.3 121 46.3
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 5.4e-20 101.3 133 42.9
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 5.4e-20 101.3 129 44.2
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 7.0e-20 100.9 133 42.9
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 7.0e-20 100.9 132 44.7
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 9.2e-20 100.5 128 44.5
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 9.2e-20 100.5 125 43.2
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 9.2e-20 100.5 129 43.4
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 9.2e-20 100.5 129 45.0
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 9.2e-20 100.5 129 45.0
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 1.2e-19 100.1 141 42.6
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.6e-19 99.8 129 43.4
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.6e-19 99.8 129 42.6
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 2.0e-19 99.4 129 41.9
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.7e-19 99.0 133 42.1
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 2.7e-19 99.0 129 43.4
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 4.6e-19 98.2 133 41.4
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 4.6e-19 98.2 129 44.2
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 7.8e-19 97.4 123 43.1
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 7.8e-19 97.4 123 43.1
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 7.8e-19 97.4 133 41.4
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 7.8e-19 97.4 133 42.1
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 7.8e-19 97.4 125 46.4
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 7.8e-19 97.4 127 44.1
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.3e-18 96.7 129 42.6
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 1.3e-18 96.7 129 42.6
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.3e-18 96.7 129 43.4
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 1.3e-18 96.7 125 42.4
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.3e-18 96.7 125 43.2
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.7e-18 96.3 129 41.9
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 3.0e-18 95.5 133 40.6
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 5.0e-18 94.7 123 44.7
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 6.6e-18 94.4 133 39.1
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 6.6e-18 94.4 128 41.4
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.1e-17 93.6 125 42.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 1.5e-17 93.2 130 41.5
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 5.6e-17 91.3 118 43.2
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 5.6e-17 91.3 141 36.9
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 3.6e-16 88.6 129 41.9
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 3.6e-16 88.6 129 41.9
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.3e-15 85.9 127 39.4
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.3e-15 85.9 117 41.0
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 3.4e-14 82.0 127 37.0
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 7.5e-14 80.9 119 38.7
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.9e-12 76.3 44 75.0
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.9e-12 76.3 44 75.0
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 2.1e-11 72.8 48 66.7
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 2.7e-11 72.4 130 36.2
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 7.8e-11 70.9 125 32.8
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.7e-10 69.7 126 33.3
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 3.9e-10 68.6 130 35.4
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 3.3e-09 65.5 44 68.2
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.1e-08 62.8 43 69.8
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.4e-07 60.1 106 36.8
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.4e-07 60.1 106 36.8
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.1e-07 58.9 36 66.7
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.2e-06 57.0 42 59.5


User provided reference genes

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