Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 5.8e-80 300.8 152 100.0
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 5.8e-80 300.8 152 100.0
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 8.5e-47 190.7 147 70.7
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 4.2e-46 188.3 146 67.1
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 4.2e-46 188.3 147 67.3
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 1.2e-45 186.8 147 64.6
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 4.7e-45 184.9 146 67.1
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 1.4e-44 183.3 144 66.0
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 1.8e-44 183.0 146 63.7
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 1.8e-44 183.0 144 66.7
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 5.2e-44 181.4 145 66.9
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 5.2e-44 181.4 148 64.9
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 6.7e-44 181.0 147 62.6
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 8.8e-44 180.6 147 62.6
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 1.1e-43 180.3 136 72.1
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 1.5e-43 179.9 147 62.6
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 2.0e-43 179.5 144 65.3
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 2.0e-43 179.5 144 66.0
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 5.7e-43 177.9 146 63.7
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 5.7e-43 177.9 148 61.5
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 5.7e-43 177.9 144 65.3
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 7.4e-43 177.6 150 60.0
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.3e-42 176.8 143 64.3
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 2.8e-42 175.6 143 62.9
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 8.2e-42 174.1 146 63.0
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 8.2e-42 174.1 146 61.0
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 1.4e-41 173.3 142 62.0
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 2.4e-41 172.6 146 59.6
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 2.4e-41 172.6 145 62.8
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 2.4e-41 172.6 145 61.4
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 3.5e-40 168.7 146 60.3
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 5.9e-40 167.9 147 59.9
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.0e-39 167.2 147 59.2
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 2.9e-39 165.6 146 61.6
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 3.8e-39 165.2 147 59.2
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 3.8e-39 165.2 131 66.4
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 6.5e-39 164.5 147 58.5
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 8.5e-39 164.1 139 61.2
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 1.5e-38 163.3 145 59.3
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 5.5e-38 161.4 144 54.9
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 1.6e-37 159.8 138 58.7
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 8.0e-37 157.5 141 59.6
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 1.8e-36 156.4 136 58.8
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 3.3e-35 152.1 144 54.2
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 4.4e-35 151.8 140 57.1
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 5.7e-35 151.4 144 54.2
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 2.2e-34 149.4 141 55.3
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 2.8e-34 149.1 147 51.7
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 4.8e-34 148.3 139 57.6
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 6.3e-34 147.9 145 53.8
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 6.3e-34 147.9 145 53.8
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 6.3e-34 147.9 144 54.9
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 8.2e-34 147.5 144 52.8
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 8.2e-34 147.5 130 60.8
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 1.1e-33 147.1 131 61.8
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 1.1e-33 147.1 145 54.5
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 1.8e-33 146.4 142 55.6
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 1.8e-33 146.4 144 53.5
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 1.8e-33 146.4 138 58.0
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 3.1e-33 145.6 144 51.4
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 4.1e-33 145.2 139 54.7
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 4.1e-33 145.2 144 51.4
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 2.0e-32 142.9 147 53.1
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 2.0e-32 142.9 145 51.7
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 2.7e-32 142.5 145 52.4
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 4.5e-32 141.7 145 52.4
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 5.9e-32 141.4 145 51.7
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 7.7e-32 141.0 144 56.2
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 1.0e-31 140.6 108 69.4
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 1.3e-31 140.2 144 49.3
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 1.3e-31 140.2 144 49.3
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 1.7e-31 139.8 144 49.3
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 1.7e-31 139.8 144 49.3
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 1.7e-31 139.8 146 54.1
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 2.2e-31 139.4 145 52.4
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 5.0e-31 138.3 142 54.2
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 5.0e-31 138.3 144 54.9
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 6.5e-31 137.9 149 47.7
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 8.5e-31 137.5 138 53.6
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 3.2e-30 135.6 145 50.3
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 9.4e-30 134.0 143 47.6
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 9.4e-30 134.0 139 50.4
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 1.2e-29 133.7 145 48.3
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 2.3e-28 129.4 132 55.3
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 3.0e-28 129.0 108 63.0
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 5.2e-28 128.3 158 44.9
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 1.5e-27 126.7 128 53.1
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 2.6e-27 125.9 128 47.7
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 1.3e-26 123.6 121 57.0
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 2.2e-26 122.9 117 53.8
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 6.3e-26 121.3 108 61.1
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 7.0e-25 117.9 114 57.9
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 3.8e-23 112.1 161 46.0
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 3.2e-22 109.0 117 47.0
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 9.5e-22 107.5 124 48.4
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 1.2e-21 107.1 122 50.8
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 1.7e-15 86.7 130 43.1
CAN.G772.6 Capsicum annuum HOM05D005833 ORTHO05D008135 6.8e-12 74.7 68 51.5
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 1.7e-10 70.1 113 41.6
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 3.7e-10 68.9 78 46.2
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 7.0e-09 64.7 51 62.7


User provided reference genes

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