Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 2.8e-210 734.9 351 100.0
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 6.5e-183 644.0 350 84.6
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.4e-180 636.3 352 84.1
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 8.8e-180 633.6 350 83.1
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 7.4e-179 630.6 352 83.5
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 1.7e-178 629.4 339 86.4
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 6.3e-178 627.5 351 84.9
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 1.8e-177 625.9 352 84.1
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 2.0e-176 622.5 351 81.2
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 1.0e-175 620.2 352 81.2
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 1.0e-175 620.2 352 82.1
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 1.0e-175 620.2 352 82.7
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 3.2e-174 615.1 352 79.8
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 1.2e-173 613.2 352 81.5
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 1.6e-173 612.8 353 83.3
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 2.1e-173 612.5 352 80.1
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 2.7e-173 612.1 352 79.5
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 6.1e-173 610.9 352 81.2
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 1.4e-172 609.8 352 80.4
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 1.4e-172 609.8 352 83.2
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 1.4e-172 609.8 352 79.3
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 6.7e-172 607.4 350 81.1
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 1.5e-171 606.3 352 79.3
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 2.0e-171 605.9 351 79.5
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 9.7e-171 603.6 350 79.7
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 2.8e-170 602.1 350 80.6
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 3.7e-170 601.7 351 78.6
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 4.8e-170 601.3 337 82.5
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 4.1e-169 598.2 375 76.8
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 7.0e-169 597.4 353 80.5
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 9.1e-169 597.0 339 80.5
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 1.2e-168 596.7 340 84.4
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 1.5e-168 596.3 361 78.1
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 3.5e-168 595.1 352 80.7
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 4.5e-168 594.7 351 77.5
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 1.0e-167 593.6 350 78.6
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 1.7e-167 592.8 352 79.0
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 1.7e-167 592.8 353 77.9
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 2.9e-167 592.0 349 79.1
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 6.5e-167 590.9 355 77.5
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 6.5e-167 590.9 351 79.5
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 6.5e-167 590.9 351 79.5
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 5.5e-166 587.8 352 77.0
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 7.2e-166 587.4 353 76.2
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 7.2e-166 587.4 350 78.0
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 9.4e-166 587.0 350 78.0
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 9.4e-166 587.0 350 78.0
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 9.4e-166 587.0 349 77.7
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 1.2e-165 586.6 351 76.4
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 2.1e-165 585.9 350 76.6
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 1.0e-164 583.6 352 76.1
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 1.0e-164 583.6 351 76.4
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 1.0e-164 583.6 351 75.2
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 1.8e-164 582.8 352 75.9
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 5.2e-164 581.3 319 84.6
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 8.8e-164 580.5 351 75.5
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 1.1e-163 580.1 352 77.8
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 1.1e-163 580.1 352 75.6
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 2.6e-163 578.9 351 75.5
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 5.7e-163 577.8 354 76.3
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 9.7e-163 577.0 351 75.5
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 1.3e-162 576.6 351 75.2
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 2.2e-162 575.9 351 75.5
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 2.2e-162 575.9 351 75.5
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 4.8e-162 574.7 352 76.7
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 1.4e-161 573.2 352 76.1
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 2.4e-161 572.4 351 75.5
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 4.1e-161 571.6 351 74.9
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 7.0e-161 570.9 351 73.5
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 9.1e-161 570.5 351 74.6
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 2.6e-160 568.9 338 76.0
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 4.5e-160 568.2 351 74.1
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 5.9e-160 567.8 318 81.8
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 5.9e-160 567.8 408 69.4
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 7.7e-160 567.4 337 76.0
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 1.0e-159 567.0 347 74.9
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 1.0e-159 567.0 351 74.4
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 6.5e-159 564.3 351 73.5
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 4.2e-158 561.6 351 74.4
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 6.1e-157 557.8 338 78.4
AUR62043922 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.4e-156 556.6 352 75.9
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 3.0e-156 555.4 354 73.4
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 6.7e-156 554.3 351 73.2
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 8.8e-156 553.9 350 73.7
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 4.4e-155 551.6 351 72.9
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 5.7e-155 551.2 358 71.8
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 9.7e-155 550.4 339 74.6
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 1.7e-154 549.7 351 73.2
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 6.3e-154 547.7 351 72.6
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 6.5e-151 537.7 351 71.5
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 6.5e-151 537.7 382 67.0
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.5e-150 536.6 346 73.7
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 1.4e-148 530.0 318 76.7
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 4.4e-147 525.0 317 75.1
Gohir.D05G256300 Gossypium hirsutum HOM05D005066 ORTHO05D006138 4.4e-147 525.0 312 77.6
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 3.8e-143 511.9 338 67.8
BcaC05g25960 Brassica carinata HOM05D005066 ORTHO05D006138 1.4e-140 503.4 295 79.3
C05p19110 Brassica napus HOM05D005066 ORTHO05D006138 2.3e-140 502.7 297 78.5
BolC5t30611H Brassica oleracea HOM05D005066 ORTHO05D006138 2.3e-140 502.7 297 78.5
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 2.4e-137 492.7 352 63.1
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 2.0e-136 489.6 395 62.3
BcaC08g47124 Brassica carinata HOM05D005066 ORTHO05D006138 1.0e-135 487.3 317 71.6
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 8.6e-135 484.2 296 76.7
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 8.6e-135 484.2 352 63.1
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 7.3e-134 481.1 322 71.7
BNapus_Darmor_BZH_scaffold_170p00070 Brassica napus HOM05D005066 ORTHO05D006138 8.3e-130 467.6 307 72.3
Psat5g011560 Pisum sativum HOM05D005066 ORTHO05D006138 6.6e-127 458.0 290 72.1
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 1.5e-126 456.8 352 58.8
MELO3C026544.2 Cucumis melo HOM05D005066 ORTHO05D006138 1.4e-121 440.3 255 77.6
CSS0013002 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 7.8e-120 434.5 353 62.6
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 4.0e-116 422.2 271 72.7
Haze_22764 Corylus avellana HOM05D005066 ORTHO05D006138 3.4e-107 392.5 223 82.5
AUR62043921 Chenopodium quinoa HOM05D005066 ORTHO05D006138 9.3e-105 384.4 201 88.1
Atru.chr13.151 Acer truncatum HOM05D005066 ORTHO05D006138 5.3e-92 342.0 180 86.7
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 1.9e-89 333.6 230 65.2
Mapoly0054s0060 Marchantia polymorpha HOM05D005066 ORTHO05D006138 6.7e-87 325.1 358 44.4
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis HOM05D005066 ORTHO05D006138 1.5e-86 323.9 355 43.9
Actinidia29788 Actinidia chinensis HOM05D005066 ORTHO05D006138 3.1e-84 316.2 212 71.2
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 8.4e-82 308.1 203 70.9
ClCG08G009490 Citrullus lanatus HOM05D005066 ORTHO05D006138 5.3e-76 288.9 158 81.6
SMO118G0316 Selaginella moellendorffii HOM05D005066 ORTHO05D006138 1.3e-74 284.3 354 40.4
SHI08001 Sapria himalayana HOM05D005066 ORTHO05D006138 1.5e-67 260.8 199 64.3
AUR62043554 Chenopodium quinoa HOM05D005066 ORTHO05D006138 3.0e-63 246.5 144 78.5
Cre02.g109400 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 5.3e-52 209.1 371 31.8
ClCG00G005440 Citrullus lanatus HOM05D005066 ORTHO05D006138 1.7e-50 204.1 125 74.4
ClCG08G009550 Citrullus lanatus HOM05D005066 ORTHO05D006138 8.5e-50 201.8 125 72.8
CDE02G3878 Ceratophyllum demersum HOM05D005066 ORTHO05D006138 8.8e-47 191.8 108 80.6
QL02p013958 Quercus lobata HOM05D005066 ORTHO05D006138 3.8e-42 176.4 87 93.1
Duzib116G0540 Durio zibethinus HOM05D005066 ORTHO05D006138 7.2e-41 172.2 226 44.2
MBI05_g41554_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 3.6e-40 169.9 128 64.1
PRCOL_00000380 Prasinoderma coloniale HOM05D005066 ORTHO05D006138 1.1e-28 131.7 306 28.1
SEGI_37952 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 1.2e-27 128.3 82 67.1
CDE04G2988 Ceratophyllum demersum HOM05D005066 ORTHO05D006138 2.9e-26 123.6 72 73.6
Haze_22758 Corylus avellana HOM05D005066 ORTHO05D006138 6.6e-26 122.5 76 78.9
vmacro11236 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 4.0e-23 113.2 93 61.3
vmacro11237 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 5.2e-23 112.8 69 75.4
CBR_g17938 Chara braunii HOM05D005066 ORTHO05D006138 4.4e-22 109.8 209 31.6
MCO04G183 Micromonas commoda HOM05D005066 ORTHO05D006138 1.4e-15 88.2 359 24.8
SEGI_07968 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 4.0e-15 86.7 60 65.0
Actinidia07458 Actinidia chinensis HOM05D005066 ORTHO05D006138 4.4e-14 83.2 44 81.8
Actinidia09068 Actinidia chinensis HOM05D005066 ORTHO05D006138 5.8e-14 82.8 54 74.1
Peaxi162Scf00362g00643 Petunia axillaris HOM05D000347 ORTHO05D001997 2.9e-13 80.5 154 25.3
DCAR_013994 Daucus carota HOM05D000347 ORTHO05D001997 8.3e-13 79.0 296 21.6
Glyma.12G033100 Glycine max HOM05D000347 ORTHO05D001997 7.8e-11 72.4 224 20.5
AUR62038170 Chenopodium quinoa HOM05D000030 ORTHO05D000031 5.0e-10 69.7 42 69.0
arahy.Tifrunner.gnm1.ann1.FBZU85 Arachis hypogaea HOM05D005066 ORTHO05D006138 8.6e-10 68.9 146 31.5
Nitab4.5_0000283g0360 Nicotiana tabacum HOM05D000347 ORTHO05D001997 1.1e-09 68.6 148 23.6
Nitab4.5_0003914g0030 Nicotiana tabacum HOM05D000347 ORTHO05D001997 1.5e-09 68.2 148 23.6
SGA_v2.0_scaffold275G46594 Striga asiatica HOM05D005066 ORTHO05D406259 1.9e-09 67.8 34 82.4
arahy.Tifrunner.gnm1.ann1.7RQ6TB Arachis hypogaea HOM05D005066 ORTHO05D006138 2.5e-09 67.4 60 50.0
AUR62018933 Chenopodium quinoa HOM05D000030 ORTHO05D000031 4.3e-09 66.6 42 66.7
Ah.01g008430 Amaranthus hybridus HOM05D000347 ORTHO05D001997 5.6e-09 66.2 170 23.5
Cre02.g109150 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 1.2e-08 65.1 74 35.1
Zm00001eb329590 Zea mays HOM05D001978 ORTHO05D003036 2.1e-08 64.3 272 21.7
Zm00001eb110650 Zea mays HOM05D001978 ORTHO05D003036 3.6e-08 63.5 272 21.3
AagrBONN_evm.TU.Sc2ySwM_228.219 Anthoceros agrestis HOM05D002302 ORTHO05D002728 4.7e-08 63.2 157 25.5
vmacro21823 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 4.7e-08 63.2 32 71.9
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 8.1e-08 62.4 49 67.3
Lsat_1_v5_gn_9_118141 Lactuca sativa HOM05D000347 ORTHO05D001997 1.4e-07 61.6 165 26.1
BraA01t03919Z Brassica rapa HOM05D000684 ORTHO05D000688 4.0e-07 60.1 235 21.7
Nn4g22810 Nelumbo nucifera HOM05D005066 ORTHO05D006138 6.8e-07 59.3 41 61.0
SMO347G0508 Selaginella moellendorffii HOM05D001978 ORTHO05D003036 6.8e-07 59.3 213 24.9
FvH4_2g01180 Fragaria vesca HOM05D000347 ORTHO05D001997 1.2e-06 58.5 147 21.1
FAN24G3508 Fragaria x ananassa HOM05D000347 ORTHO05D001997 1.2e-06 58.5 147 21.1
SEGI_12583 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 1.5e-06 58.2 46 58.7
FAN15G3271 Fragaria x ananassa HOM05D000347 ORTHO05D001997 2.0e-06 57.8 147 21.1
FAN20G0646 Fragaria x ananassa HOM05D000347 ORTHO05D001997 2.0e-06 57.8 147 21.1
Phvul.011G035800 Phaseolus vulgaris HOM05D000347 ORTHO05D001997 2.0e-06 57.8 124 25.0
Lj9A311G56 Lonicera japonica HOM05D000347 ORTHO05D001997 4.4e-06 56.6 162 21.6
Os11g0660300 Oryza sativa ssp. japonica HOM05D005151 ORTHO05D006322 5.8e-06 56.2 244 21.7
Phvul.008G230000 Phaseolus vulgaris HOM05D001260 ORTHO05D004134 9.8e-06 55.5 185 25.4
TWI38G0285 Tripterygium wilfordii HOM05D001260 ORTHO05D004134 9.8e-06 55.5 180 25.6


User provided reference genes

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