Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010989.1 Olea europaea HOM05D003674 ORTHO05D004226 4.8e-79 297.7 148 100.0
Oeu017490.2 Olea europaea HOM05D003674 ORTHO05D004226 4.7e-50 201.4 191 59.2
MSTRG.14344 Avicennia marina HOM05D003674 ORTHO05D004226 9.5e-43 177.2 150 64.0
Migut.H01179 Erythranthe guttata HOM05D003674 ORTHO05D004226 3.6e-42 175.3 161 60.9
SalBow1G3138 Salvia bowleyana HOM05D003674 ORTHO05D004226 6.1e-42 174.5 142 63.4
SalBow1G0286 Salvia bowleyana HOM05D003674 ORTHO05D004226 1.8e-41 172.9 142 63.4
QL08p038913 Quercus lobata HOM05D003674 ORTHO05D004226 2.6e-40 169.1 151 55.6
Cc05_g07170 Coffea canephora HOM05D003674 ORTHO05D004226 1.7e-39 166.4 154 59.1
QL08p038784 Quercus lobata HOM05D003674 ORTHO05D004226 3.7e-39 165.2 151 57.6
Hma1.2p1_1937F.1_g308270 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 4.9e-39 164.9 151 60.3
MSTRG.14340 Avicennia marina HOM05D003674 ORTHO05D004226 8.3e-39 164.1 116 70.7
CSS0035927 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 1.4e-38 163.3 144 59.7
CsaV3_7G004450 Cucumis sativus L. HOM05D003674 ORTHO05D004226 2.4e-38 162.5 153 58.2
SGA_v2.0_scaffold322G48614 Striga asiatica HOM05D003674 ORTHO05D004226 5.4e-38 161.4 132 64.4
Actinidia11032 Actinidia chinensis HOM05D003674 ORTHO05D004226 7.0e-38 161.0 157 58.0
Dinv23635 Davidia involucrata HOM05D003674 ORTHO05D004226 7.0e-38 161.0 144 59.0
RcHm_v2.0_Chr2g0126551 Rosa chinensis HOM05D003674 ORTHO05D004226 7.0e-38 161.0 154 57.1
Peaxi162Scf00132g00119 Petunia axillaris HOM05D003674 ORTHO05D004226 2.0e-37 159.5 148 56.8
Thecc.02G180000 Theobroma cacao HOM05D003674 ORTHO05D004226 2.0e-37 159.5 137 61.3
CiPaw.04G126100 Carya illinoinensis HOM05D003674 ORTHO05D004226 5.9e-37 157.9 144 56.9
Rhsim06G0142000 Rhododendron simsii HOM05D003674 ORTHO05D004226 5.9e-37 157.9 152 57.2
RcHm_v2.0_Chr2g0126531 Rosa chinensis HOM05D003674 ORTHO05D004226 5.9e-37 157.9 152 57.9
Actinidia11076 Actinidia chinensis HOM05D003674 ORTHO05D004226 7.8e-37 157.5 157 55.4
Duzib132G0159 Durio zibethinus HOM05D003674 ORTHO05D004226 7.8e-37 157.5 135 58.5
Eucgr.K01030 Eucalyptus grandis HOM05D003674 ORTHO05D004226 1.3e-36 156.8 151 54.3
Hma1.2p1_1836F.1_g304700 Hydrangea macrophylla HOM05D003674 ORTHO05D004226 1.3e-36 156.8 145 57.9
QL08p038841 Quercus lobata HOM05D003674 ORTHO05D004226 1.3e-36 156.8 146 56.2
Gohir.A03G156500 Gossypium hirsutum HOM05D003674 ORTHO05D004226 1.7e-36 156.4 136 59.6
Gorai.005G201400 Gossypium raimondii HOM05D003674 ORTHO05D004226 1.7e-36 156.4 136 59.6
unitig_749.g13960 Utricularia gibba HOM05D003674 ORTHO05D004226 1.7e-36 156.4 148 57.4
vmacro12304 Vaccinium macrocarpon HOM05D003674 ORTHO05D004226 2.3e-36 156.0 154 56.5
Nitab4.5_0004344g0030 Nicotiana tabacum HOM05D003674 ORTHO05D004226 2.9e-36 155.6 146 54.8
PGR142G3148 Punica granatum HOM05D003674 ORTHO05D004226 2.9e-36 155.6 141 58.2
COL.COLO4_30194 Corchorus olitorius HOM05D003674 ORTHO05D004226 5.0e-36 154.8 135 58.5
Nitab4.5_0000512g0010 Nicotiana tabacum HOM05D003674 ORTHO05D004226 5.0e-36 154.8 145 55.2
TAR624G0523 Trochodendron aralioides HOM05D003674 ORTHO05D004226 5.0e-36 154.8 151 56.3
GSVIVG01020549001 Vitis vinifera HOM05D003674 ORTHO05D004226 5.0e-36 154.8 151 56.3
Eucgr.K01029 Eucalyptus grandis HOM05D003674 ORTHO05D004226 6.6e-36 154.5 151 55.6
ClCG07G002890 Citrullus lanatus HOM05D003674 ORTHO05D004226 8.6e-36 154.1 130 60.8
MELO3C018734.2 Cucumis melo HOM05D003674 ORTHO05D004226 8.6e-36 154.1 130 60.0
Cfa014617 Carpinus fangiana HOM05D003674 ORTHO05D004226 1.1e-35 153.7 146 55.5
Ciclev10014388m.g Citrus clementina HOM05D003674 ORTHO05D004226 1.1e-35 153.7 128 64.1
Solyc07g053970.3 Solanum lycopersicum HOM05D003674 ORTHO05D004226 1.1e-35 153.7 150 53.3
Gohir.D02G179632 Gossypium hirsutum HOM05D003674 ORTHO05D004226 1.5e-35 153.3 136 58.8
Lsat_1_v5_gn_4_66721 Lactuca sativa HOM05D003674 ORTHO05D004226 2.5e-35 152.5 151 54.3
Prupe.3G138600 Prunus persica HOM05D003674 ORTHO05D004226 2.5e-35 152.5 151 54.3
FvH4_6g26210 Fragaria vesca HOM05D003674 ORTHO05D004226 3.3e-35 152.1 151 54.3
CSS0020583 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 4.3e-35 151.8 156 57.7
CAN.G248.4 Capsicum annuum HOM05D003674 ORTHO05D004226 4.3e-35 151.8 150 54.0
TAR624G0345 Trochodendron aralioides HOM05D003674 ORTHO05D004226 4.3e-35 151.8 146 58.2
EL10Ac9g20767 Beta vulgaris HOM05D003674 ORTHO05D004226 5.6e-35 151.4 135 57.0
CiPaw.03G177300 Carya illinoinensis HOM05D003674 ORTHO05D004226 5.6e-35 151.4 151 54.3
FAN02G2237 Fragaria x ananassa HOM05D003674 ORTHO05D004226 7.3e-35 151.0 151 54.3
SHI10407 Sapria himalayana HOM05D003674 ORTHO05D004226 9.5e-35 150.6 149 54.4
THA.LOC104801172 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 9.5e-35 150.6 151 53.6
DCAR_021245 Daucus carota HOM05D003674 ORTHO05D004226 1.2e-34 150.2 126 60.3
Aa31LG5G2940 Aethionema arabicum HOM05D003674 ORTHO05D004226 2.8e-34 149.1 145 53.8
CSS0005418 Camellia sinensis var. sinensis HOM05D003674 ORTHO05D004226 2.8e-34 149.1 134 59.7
Thhalv10029480m.g Eutrema salsugineum HOM05D003674 ORTHO05D004226 2.8e-34 149.1 138 54.3
Eucgr.K01031 Eucalyptus grandis HOM05D003674 ORTHO05D004226 3.6e-34 148.7 143 54.5
HanXRQChr10g0297111 Helianthus annuus HOM05D003674 ORTHO05D004226 4.7e-34 148.3 138 55.8
Sabra13G0110700 Salix brachista HOM05D003674 ORTHO05D004226 4.7e-34 148.3 157 55.4
arahy.Tifrunner.gnm1.ann1.1DM7TY Arachis hypogaea HOM05D003674 ORTHO05D004226 8.0e-34 147.5 138 55.8
arahy.Tifrunner.gnm1.ann1.1TZ75T Arachis hypogaea HOM05D003674 ORTHO05D004226 8.0e-34 147.5 138 55.8
ECA234G3736 Erigeron canadensis HOM05D003674 ORTHO05D004226 8.0e-34 147.5 153 52.9
MBI06_g04180_MAGBIO Magnolia biondii HOM05D003674 ORTHO05D004226 8.0e-34 147.5 136 55.9
Cpa.g.sc848.1 Carica papaya HOM05D003674 ORTHO05D004226 1.0e-33 147.1 135 54.1
CARHR251990 Cardamine hirsuta HOM05D003674 ORTHO05D004226 2.3e-33 146.0 130 55.4
THA.LOC104826033 Tarenaya hassleriana HOM05D003674 ORTHO05D004226 2.3e-33 146.0 124 58.9
Ah.01g004260 Amaranthus hybridus HOM05D003674 ORTHO05D004226 4.0e-33 145.2 129 58.1
Hund01095 Selenicereus undatus HOM05D003674 ORTHO05D004226 5.2e-33 144.8 146 55.5
AUR62042592 Chenopodium quinoa HOM05D003674 ORTHO05D004226 6.8e-33 144.4 128 57.8
MD09G1247300 Malus domestica HOM05D003674 ORTHO05D004226 6.8e-33 144.4 154 51.3
Nn1g06551 Nelumbo nucifera HOM05D003674 ORTHO05D004226 6.8e-33 144.4 126 63.5
Sabra13G0110800 Salix brachista HOM05D003674 ORTHO05D004226 8.9e-33 144.1 155 52.3
AUR62037356 Chenopodium quinoa HOM05D003674 ORTHO05D004226 1.5e-32 143.3 145 53.1
VMungo0464G1662 Vigna mungo HOM05D003674 ORTHO05D004226 1.5e-32 143.3 151 49.7
Aqoxy4G00814 Aquilegia oxysepala HOM05D003674 ORTHO05D004226 2.0e-32 142.9 126 57.9
BcaB01g01906 Brassica carinata HOM05D003674 ORTHO05D004226 2.6e-32 142.5 124 54.8
Os01g0678500 Oryza sativa ssp. japonica HOM05D003674 ORTHO05D004226 2.6e-32 142.5 131 54.2
BolC9t53217H Brassica oleracea HOM05D003674 ORTHO05D004226 3.4e-32 142.1 130 53.1
BraA09t35927Z Brassica rapa HOM05D003674 ORTHO05D004226 3.4e-32 142.1 124 54.8
Potri.013G131100 Populus trichocarpa HOM05D003674 ORTHO05D004226 3.4e-32 142.1 155 52.9
Sp6g03570 Schrenkiella parvula HOM05D003674 ORTHO05D004226 3.4e-32 142.1 124 54.8
BcaC04g23961 Brassica carinata HOM05D003674 ORTHO05D004226 4.4e-32 141.7 138 51.4
Glyma.12G204400 Glycine max HOM05D003674 ORTHO05D004226 4.4e-32 141.7 146 50.7
HPP92_008135 Vanilla planifolia HOM05D003674 ORTHO05D004226 5.8e-32 141.4 156 51.9
C03p36660 Brassica napus HOM05D003674 ORTHO05D004226 7.5e-32 141.0 126 54.0
Lalb_Chr22g0356561 Lupinus albus HOM05D003674 ORTHO05D004226 7.5e-32 141.0 134 54.5
AL6G49310 Arabidopsis lyrata HOM05D003674 ORTHO05D004226 1.3e-31 140.2 126 54.8
Glyma.13G296900 Glycine max HOM05D003674 ORTHO05D004226 1.7e-31 139.8 146 50.7
MD17G1240200 Malus domestica HOM05D003674 ORTHO05D004226 1.7e-31 139.8 154 52.6
SEGI_19203 Sequoiadendron giganteum HOM05D003674 ORTHO05D004226 2.2e-31 139.4 138 52.9
BcaB01g02542 Brassica carinata HOM05D003674 ORTHO05D004226 3.7e-31 138.7 124 54.0
BcaC01g06668 Brassica carinata HOM05D003674 ORTHO05D004226 3.7e-31 138.7 124 54.0
A03p30360 Brassica napus HOM05D003674 ORTHO05D004226 3.7e-31 138.7 124 54.0
BolC3t15980H Brassica oleracea HOM05D003674 ORTHO05D004226 3.7e-31 138.7 124 54.0
BraA03t12218Z Brassica rapa HOM05D003674 ORTHO05D004226 3.7e-31 138.7 124 54.0
Lj3g0012901 Lotus japonicus HOM05D003674 ORTHO05D004226 3.7e-31 138.7 141 52.5
PSO832G0572 Papaver somniferum HOM05D003674 ORTHO05D004226 3.7e-31 138.7 147 52.4
Carub.0006s3351 Capsella rubella HOM05D003674 ORTHO05D004226 4.9e-31 138.3 126 54.0
Medtr2g090380 Medicago truncatula HOM05D003674 ORTHO05D004226 4.9e-31 138.3 135 52.6
CDE06G1319 Ceratophyllum demersum HOM05D003674 ORTHO05D004226 6.4e-31 137.9 152 49.3
PSO210G7128 Papaver somniferum HOM05D003674 ORTHO05D004226 6.4e-31 137.9 147 51.0
TPR.G6424 Trifolium pratense HOM05D003674 ORTHO05D004226 6.4e-31 137.9 138 52.9
Psat5g272320 Pisum sativum HOM05D003674 ORTHO05D004226 1.1e-30 137.1 136 49.3
DCAR_013010 Daucus carota HOM05D003674 ORTHO05D004226 1.9e-30 136.3 140 54.3
Sc12g0003090 Simmondsia chinensis HOM05D003674 ORTHO05D004226 1.9e-30 136.3 146 51.4
AT4G03560 Arabidopsis thaliana HOM05D003674 ORTHO05D004226 2.4e-30 136.0 151 49.7
Phvul.004G108300 Phaseolus vulgaris HOM05D003674 ORTHO05D004226 7.0e-30 134.4 146 50.7
HanXRQChr06g0179591 Helianthus annuus HOM05D003674 ORTHO05D004226 1.2e-29 133.7 149 49.0
Peaxi162Scf00132g00118 Petunia axillaris HOM05D003674 ORTHO05D004226 1.5e-27 126.7 134 49.3
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 1.9e-27 126.3 85 63.5
ATR0737G001 Amborella trichopoda HOM05D003674 ORTHO05D004226 5.6e-27 124.8 140 47.9
Sed0011332 Sechium edule HOM05D003674 ORTHO05D004226 7.3e-27 124.4 90 63.3
DCAR_013011 Daucus carota HOM05D003674 ORTHO05D004226 9.5e-27 124.0 127 52.8
PSO675G3793 Papaver somniferum HOM05D003674 ORTHO05D004226 9.5e-27 124.0 149 47.0
Nitab4.5_0000638g0270 Nicotiana tabacum HOM05D003674 ORTHO05D004226 1.1e-25 120.6 152 48.7
AagrBONN_evm.TU.Sc2ySwM_344.5080 Anthoceros agrestis HOM05D003674 ORTHO05D004226 2.0e-24 116.3 121 46.3
Pp3c1_6270 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.9e-22 109.8 156 44.2
Pp3c1_6272 Physcomitrium patens HOM05D003674 ORTHO05D004226 1.9e-22 109.8 156 44.2
FAN05G0320 Fragaria x ananassa HOM05D000230 ORTHO05D000176 9.2e-22 107.5 115 52.2
Pp3c15_12230 Physcomitrium patens HOM05D003674 ORTHO05D004226 6.6e-20 101.3 148 42.6
arahy.Tifrunner.gnm1.ann1.Y3H9JV Arachis hypogaea HOM05D003674 ORTHO05D004226 8.6e-20 100.9 76 60.5
FAN09G3196 Fragaria x ananassa HOM05D000230 ORTHO05D004226 1.9e-19 99.8 72 62.5
Haze_13163 Corylus avellana HOM05D003674 ORTHO05D004226 4.3e-19 98.6 110 51.8
A09p02830 Brassica napus HOM05D000230 ORTHO05D000176 7.3e-19 97.8 102 52.0
Mapoly0002s0274 Marchantia polymorpha HOM05D003674 ORTHO05D004226 2.1e-18 96.3 120 45.0
PGSC0003DMG400018342 Solanum tuberosum HOM05D003674 ORTHO05D004226 2.1e-18 96.3 60 68.3
DCAR_019181 Daucus carota HOM05D003674 ORTHO05D004226 2.3e-17 92.8 103 55.3
MSTRG.14333 Avicennia marina HOM05D003674 ORTHO05D004226 9.2e-14 80.9 85 58.8
Lsat_1_v5_gn_4_64281 Lactuca sativa HOM05D003674 ORTHO05D004226 2.1e-13 79.7 109 46.8
TWI75G1008 Tripterygium wilfordii HOM05D003674 ORTHO05D004226 2.1e-10 69.7 148 37.2
Lj4g0017968 Lotus japonicus HOM05D003674 ORTHO05D004226 3.8e-07 58.9 47 59.6
arahy.Tifrunner.gnm1.ann1.WCYV83 Arachis hypogaea HOM05D003674 ORTHO05D004226 8.4e-07 57.8 37 62.2


User provided reference genes

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