Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 5.7e-164 580.9 296 100.0
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 6.4e-107 391.3 326 63.2
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 3.6e-102 375.6 332 60.5
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 1.2e-100 370.5 327 60.2
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 7.1e-98 361.3 332 59.0
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 7.1e-98 361.3 308 63.0
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 2.1e-97 359.8 329 59.3
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 2.7e-97 359.4 330 58.5
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 2.3e-96 356.3 303 62.0
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 5.6e-95 351.7 329 59.0
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 7.3e-95 351.3 321 58.9
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 1.2e-94 350.5 315 61.0
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 2.8e-94 349.4 321 58.6
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.1e-93 347.4 329 57.4
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 5.2e-93 345.1 323 58.2
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 1.2e-92 344.0 335 58.2
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.2e-92 344.0 325 58.2
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 2.0e-92 343.2 331 57.1
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 4.9e-91 338.6 314 58.0
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 1.1e-90 337.4 321 56.4
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 1.4e-90 337.0 309 59.2
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 3.2e-90 335.9 323 55.4
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 6.0e-89 331.6 325 54.5
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 7.8e-89 331.3 301 61.5
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 3.9e-88 328.9 324 57.7
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 6.6e-88 328.2 325 55.4
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.5e-87 327.0 324 56.5
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 1.9e-87 326.6 310 59.4
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.9e-87 326.6 331 55.3
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 1.9e-87 326.6 324 56.5
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 2.5e-87 326.2 331 55.6
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 3.3e-87 325.9 308 56.5
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 7.3e-87 324.7 314 56.1
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 7.3e-87 324.7 331 55.0
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 9.6e-87 324.3 333 56.2
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 1.3e-86 323.9 320 55.6
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 1.6e-86 323.6 313 57.8
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 2.8e-86 322.8 324 55.2
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 3.6e-86 322.4 321 56.1
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.1e-85 320.9 319 55.5
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 1.4e-85 320.5 316 56.3
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 3.1e-85 319.3 302 59.3
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 6.9e-85 318.2 323 54.8
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 6.9e-85 318.2 320 55.3
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 6.9e-85 318.2 301 58.5
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 9.0e-85 317.8 322 55.0
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 9.0e-85 317.8 327 54.7
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 1.2e-84 317.4 325 55.4
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 2.0e-84 316.6 309 58.6
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 2.0e-84 316.6 318 55.3
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 2.6e-84 316.2 322 54.7
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 2.6e-84 316.2 312 55.4
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 7.6e-84 314.7 327 53.2
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.3e-83 313.9 300 56.7
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 4.9e-83 312.0 303 58.1
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 2.1e-81 306.6 304 55.6
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 7.9e-81 304.7 302 56.6
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 7.9e-81 304.7 301 55.1
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 1.3e-80 303.9 327 53.2
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.3e-80 303.1 329 53.2
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.3e-80 303.1 329 53.2
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 1.5e-79 300.4 307 54.7
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 2.5e-79 299.7 330 53.0
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 4.3e-79 298.9 297 56.6
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 5.6e-79 298.5 298 56.7
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 9.6e-79 297.7 308 54.5
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 3.1e-77 292.7 312 53.2
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 3.1e-77 292.7 312 53.2
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 6.9e-77 291.6 312 53.2
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 1.5e-76 290.4 320 51.6
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 2.0e-76 290.0 299 55.5
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.6e-76 289.7 312 52.9
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 5.8e-76 288.5 324 53.4
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 8.4e-75 284.6 324 51.9
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.4e-74 283.9 324 51.5
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 2.4e-74 283.1 310 51.9
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 4.2e-74 282.3 312 52.9
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 1.6e-73 280.4 305 53.4
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 6.0e-73 278.5 299 54.5
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 6.0e-73 278.5 296 55.1
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 6.0e-73 278.5 296 55.1
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 1.0e-72 277.7 311 52.1
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.3e-72 277.3 309 51.1
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 3.0e-72 276.2 368 46.2
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 5.1e-72 275.4 331 49.8
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 5.1e-72 275.4 333 49.5
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 6.7e-72 275.0 299 54.5
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 8.7e-72 274.6 331 50.5
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 2.5e-71 273.1 322 51.2
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 1.6e-70 270.4 328 51.5
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 2.1e-70 270.0 322 49.7
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 5.8e-68 261.9 297 52.2
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 7.6e-68 261.5 309 53.1
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 7.6e-68 261.5 310 49.0
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.0e-67 261.2 186 67.7
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 4.2e-66 255.8 304 50.7
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 1.3e-64 250.8 301 48.8
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 6.7e-64 248.4 154 74.7
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 2.8e-62 243.0 316 48.4
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 1.4e-61 240.7 316 46.8
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 5.3e-61 238.8 406 39.4
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 2.3e-56 223.4 302 45.4
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 3.3e-55 219.5 328 42.7
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 3.4e-44 183.0 301 43.5
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 1.3e-43 181.0 305 39.3
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 2.9e-43 179.9 299 39.1
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.9e-42 177.2 203 46.8
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 1.4e-40 171.0 128 64.1
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 5.2e-40 169.1 330 37.3
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 1.1e-39 167.9 201 45.3
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 7.7e-36 155.2 195 44.1
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 5.0e-35 152.5 266 44.0
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 2.0e-31 140.6 336 32.1
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 5.7e-31 139.0 324 32.4
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 1.9e-26 124.0 137 47.4
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 2.7e-25 120.2 200 36.5
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 8.8e-24 115.2 145 42.1
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 9.8e-23 111.7 161 44.1
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 3.1e-21 106.7 211 36.0
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.3e-19 101.3 211 35.1
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 6.5e-19 99.0 192 38.5
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 1.5e-18 97.8 57 68.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 1.9e-18 97.4 57 68.4
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 4.1e-13 79.7 112 45.5
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 8.9e-08 62.0 45 64.4


User provided reference genes

Program Settings