Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 4.3e-273 944.1 501 100.0
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 7.8e-89 332.0 505 45.9
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 4.4e-84 316.2 506 44.5
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 3.6e-78 296.6 509 44.0
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 3.2e-74 283.5 508 44.3
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 6.0e-65 252.7 506 38.5
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 1.3e-64 251.5 512 39.1
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 1.6e-62 244.6 509 38.7
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 2.1e-62 244.2 514 38.1
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 1.1e-61 241.9 512 39.3
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.2e-60 238.4 481 37.4
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 1.7e-59 234.6 507 39.6
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 1.9e-58 231.1 522 38.3
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 1.9e-58 231.1 511 39.5
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 3.2e-58 230.3 514 38.9
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 5.4e-58 229.6 514 39.1
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 1.0e-56 225.3 460 38.7
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 1.0e-56 225.3 512 37.7
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 5.1e-56 223.0 501 38.9
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 6.6e-56 222.6 514 36.6
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 8.7e-56 222.2 510 37.1
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 1.9e-55 221.1 511 39.3
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 4.3e-55 219.9 508 40.0
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 5.6e-55 219.5 478 36.6
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 1.3e-54 218.4 521 36.7
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 1.6e-54 218.0 343 46.9
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 2.8e-54 217.2 332 46.7
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 9.0e-53 212.2 502 37.8
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 1.2e-52 211.8 504 36.5
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 7.6e-52 209.1 508 36.6
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 1.3e-51 208.4 505 37.4
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 1.7e-51 208.0 339 43.7
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 4.9e-51 206.5 511 36.2
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 6.4e-51 206.1 593 34.6
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 6.4e-51 206.1 512 37.7
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 1.1e-50 205.3 430 38.8
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 2.4e-50 204.1 515 36.7
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 2.4e-50 204.1 308 44.8
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 2.4e-50 204.1 511 35.6
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 4.2e-50 203.4 525 34.3
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 9.3e-50 202.2 504 35.7
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 1.2e-49 201.8 511 35.6
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 1.2e-49 201.8 512 35.9
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 1.6e-49 201.4 513 36.5
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 7.9e-49 199.1 513 36.8
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 7.9e-49 199.1 483 35.4
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 1.3e-48 198.4 330 43.0
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 3.0e-48 197.2 515 35.5
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 3.0e-48 197.2 521 35.3
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 6.7e-48 196.1 330 42.7
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 1.1e-47 195.3 509 36.7
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 2.5e-47 194.1 297 45.1
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 5.3e-45 186.4 505 35.6
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 2.6e-44 184.1 337 40.4
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 4.5e-44 183.3 327 41.3
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 4.5e-44 183.3 518 34.9
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 2.9e-43 180.6 339 39.5
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 2.5e-42 177.6 331 43.5
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 7.1e-42 176.0 511 34.6
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 7.1e-42 176.0 507 33.9
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 9.3e-42 175.6 372 37.6
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 9.3e-42 175.6 336 42.3
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 1.3e-40 171.8 515 32.8
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 2.3e-40 171.0 532 32.7
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 3.9e-40 170.2 224 48.7
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.5e-39 168.3 514 32.1
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 4.3e-39 166.8 402 36.1
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 4.3e-39 166.8 263 43.0
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 4.3e-39 166.8 515 32.4
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 7.4e-39 166.0 516 32.6
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 1.3e-38 165.2 283 42.0
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 2.8e-38 164.1 234 46.2
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 3.1e-37 160.6 323 39.3
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 4.1e-37 160.2 510 32.0
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 5.3e-37 159.8 356 37.9
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 9.0e-37 159.1 339 40.7
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.2e-36 158.7 292 39.7
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 1.2e-36 158.7 178 50.6
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 2.0e-36 157.9 329 37.4
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 2.6e-36 157.5 514 31.5
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.3e-35 155.2 340 39.4
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 3.8e-35 153.7 307 39.7
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 5.0e-35 153.3 342 40.6
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 5.0e-35 153.3 506 33.8
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 6.5e-35 152.9 360 35.6
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 8.4e-35 152.5 515 31.3
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.1e-34 152.1 501 31.1
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 2.5e-34 151.0 346 36.4
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 4.2e-34 150.2 264 40.2
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 5.5e-34 149.8 514 30.4
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 5.5e-34 149.8 343 36.4
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 5.5e-34 149.8 363 35.8
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.2e-33 148.7 316 37.0
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 3.5e-33 147.1 514 32.3
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 6.1e-33 146.4 511 31.5
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 3.0e-32 144.1 515 30.9
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 3.9e-32 143.7 324 37.3
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 1.9e-31 141.4 515 30.7
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 2.5e-31 141.0 238 42.4
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 9.7e-31 139.0 279 38.4
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.8e-30 137.5 472 32.4
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 6.3e-30 136.3 222 44.1
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.4e-29 135.2 426 31.5
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 1.8e-29 134.8 506 31.4
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 2.4e-29 134.4 505 31.3
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 5.3e-29 133.3 516 29.5
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 5.3e-29 133.3 181 46.4
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 2.6e-28 131.0 509 31.0
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 3.4e-28 130.6 340 34.4
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 3.8e-27 127.1 213 42.3
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 2.7e-25 120.9 225 42.7
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 1.8e-24 118.2 554 30.0
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 5.1e-24 116.7 208 40.4
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 8.2e-22 109.4 190 41.1
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 4.5e-20 103.6 478 29.7
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 4.5e-20 103.6 91 62.6
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 5.5e-18 96.7 68 67.6
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 3.6e-17 94.0 240 33.3
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 3.6e-17 94.0 245 31.4
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 2.0e-15 88.2 240 30.0
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 3.7e-14 84.0 71 69.0
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 1.1e-13 82.4 170 41.2
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 2.6e-12 77.8 298 26.2
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 2.9e-11 74.3 463 24.6
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 1.5e-10 72.0 144 33.3
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 5.2e-08 63.5 166 31.9


User provided reference genes

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