Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 4.6e-164 582.4 697 100.0
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 3.4e-82 310.5 326 63.2
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 5.0e-78 296.6 306 63.1
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 7.5e-74 282.7 307 62.9
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 6.4e-73 279.6 261 70.1
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 3.5e-71 273.9 282 65.6
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 1.7e-70 271.6 306 62.7
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 3.0e-70 270.8 260 70.0
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 3.9e-70 270.4 261 67.8
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 1.9e-69 268.1 263 68.1
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.9e-69 268.1 276 59.8
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 3.3e-69 267.3 319 60.2
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 3.3e-69 267.3 281 64.4
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 7.3e-69 266.2 284 63.7
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 1.6e-68 265.0 301 56.8
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 3.6e-68 263.8 300 62.0
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 3.1e-67 260.8 286 61.9
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 4.0e-67 260.4 320 56.6
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 6.8e-67 259.6 313 60.1
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 2.0e-66 258.1 275 63.3
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.0e-66 258.1 296 61.8
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 2.6e-66 257.7 305 61.0
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.6e-66 257.7 259 68.7
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 3.4e-66 257.3 262 65.6
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 2.2e-65 254.6 274 62.4
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 4.9e-65 253.4 269 63.9
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 1.9e-64 251.5 301 58.5
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.4e-64 251.1 270 63.0
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 2.4e-64 251.1 302 58.9
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 9.2e-64 249.2 287 59.6
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 6.0e-63 246.5 279 62.0
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 6.0e-63 246.5 279 62.0
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.7e-62 245.0 293 59.7
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 1.7e-62 245.0 304 58.2
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 3.0e-62 244.2 256 64.5
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 3.9e-62 243.8 261 59.8
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 1.1e-61 242.3 276 60.1
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 2.5e-61 241.1 304 58.2
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 5.6e-61 240.0 307 56.7
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 7.3e-61 239.6 305 57.0
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 7.3e-61 239.6 304 57.2
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 1.2e-60 238.8 306 56.2
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 3.6e-60 237.3 288 62.5
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 3.6e-60 237.3 319 56.1
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 1.1e-59 235.7 318 59.1
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.1e-59 235.7 256 64.5
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 6.8e-59 233.0 297 55.9
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.2e-58 232.3 308 51.6
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 1.5e-58 231.9 264 63.3
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 2.0e-58 231.5 249 64.7
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 9.9e-58 229.2 297 55.2
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 1.3e-57 228.8 259 62.5
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 1.3e-57 228.8 324 51.9
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 1.7e-57 228.4 275 49.1
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 2.2e-57 228.0 260 61.9
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 2.9e-57 227.6 253 63.2
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 3.8e-57 227.3 298 55.4
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 3.8e-57 227.3 298 55.4
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 3.8e-57 227.3 298 53.7
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 2.4e-56 224.6 295 56.3
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 3.5e-55 220.7 298 55.0
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 1.0e-54 219.2 287 56.1
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 1.1e-53 215.7 297 53.9
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 1.1e-53 215.7 277 58.5
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 1.9e-53 214.9 266 59.0
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 1.9e-53 214.9 269 56.1
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 1.6e-52 211.8 269 56.5
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 2.8e-52 211.1 269 56.5
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 3.6e-52 210.7 271 59.0
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 4.7e-52 210.3 281 56.9
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 8.1e-52 209.5 269 56.5
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 1.1e-51 209.1 298 53.0
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 2.4e-51 208.0 297 54.2
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 2.0e-50 204.9 251 60.6
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 4.9e-49 200.3 236 61.0
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 3.0e-46 191.0 219 65.3
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 3.1e-43 181.0 218 63.8
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 3.1e-43 181.0 227 59.0
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 1.2e-42 179.1 220 60.5
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 2.0e-42 178.3 218 60.6
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 4.5e-42 177.2 241 59.3
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 5.8e-42 176.8 260 56.5
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 7.6e-42 176.4 220 61.8
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 1.7e-41 175.3 222 60.4
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 2.2e-41 174.9 254 53.9
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 3.8e-41 174.1 228 58.3
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 7.1e-40 169.9 225 57.8
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 1.2e-39 169.1 175 54.9
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 3.5e-39 167.5 222 59.5
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 3.5e-39 167.5 249 42.2
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 7.9e-39 166.4 221 57.9
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 2.1e-36 158.3 221 55.7
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 2.0e-34 151.8 278 48.9
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 2.9e-33 147.9 221 54.3
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 2.9e-33 147.9 148 51.4
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.1e-31 141.7 218 54.1
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 1.0e-30 139.4 218 53.7
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 1.3e-25 122.5 285 45.6
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 3.5e-23 114.4 126 50.8
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 1.1e-16 92.8 246 30.9
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 3.2e-16 91.3 70 61.4
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 4.2e-16 90.9 61 70.5
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 4.2e-16 90.9 61 70.5
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 7.9e-15 86.7 169 33.7
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 2.3e-14 85.1 231 28.6
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 3.9e-14 84.3 70 58.6
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 4.8e-12 77.4 141 31.9
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.8e-11 75.5 57 61.4
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 2.4e-11 75.1 48 70.8
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.7e-09 68.9 51 64.7
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.0e-06 59.7 71 42.3
PSO384G0446 Papaver somniferum HOM05D003900 ORTHO05D005009 1.8e-06 58.9 120 28.3
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 8.8e-06 56.6 162 28.4


User provided reference genes

Program Settings