Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 0.0e+00 1338.6 708 100.0
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 0.0e+00 1178.3 675 94.1
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 4.3e-303 1044.3 676 85.4
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 1.5e-258 896.3 677 71.8
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 9.8e-247 857.1 684 71.8
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 1.1e-245 853.6 700 65.7
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 4.4e-239 831.6 690 70.3
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 7.8e-236 820.8 688 69.6
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 4.0e-232 808.5 688 69.5
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.0e-232 808.5 688 68.9
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.2e-232 808.1 689 70.8
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 5.2e-232 808.1 692 69.9
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 1.5e-231 806.6 689 69.8
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 2.0e-231 806.2 689 69.8
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 9.9e-231 803.9 686 69.8
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 1.3e-230 803.5 683 66.2
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.1e-229 800.4 695 67.9
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 1.9e-229 799.7 690 68.3
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 6.6e-227 791.2 695 67.3
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.8e-225 785.8 693 64.6
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 1.7e-222 776.5 693 62.2
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 8.4e-222 774.2 686 65.9
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 5.6e-218 761.5 711 63.2
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 1.6e-217 760.0 693 61.5
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 2.8e-217 759.2 702 61.5
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 4.8e-217 758.4 693 61.5
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 1.7e-214 750.0 682 62.3
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 2.2e-214 749.6 693 62.2
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 2.3e-211 739.6 693 61.6
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 1.9e-210 736.5 725 61.7
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 3.3e-210 735.7 695 63.3
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 1.3e-209 733.8 692 59.5
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 2.8e-209 732.6 689 60.5
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 4.8e-209 731.9 701 61.5
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.1e-208 730.7 693 60.8
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 2.4e-208 729.6 685 65.5
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 3.4e-207 725.7 696 64.4
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 2.4e-205 719.5 693 61.9
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 1.6e-204 716.8 697 61.0
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 3.5e-204 715.7 682 62.8
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 2.3e-203 713.0 703 57.9
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 4.0e-200 702.2 688 59.4
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 6.9e-200 701.4 700 57.9
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 1.2e-199 700.7 705 57.7
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.5e-199 700.3 740 61.4
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 1.7e-198 696.8 683 59.2
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 3.8e-198 695.7 712 56.9
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 1.4e-197 693.7 699 57.1
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 3.2e-197 692.6 709 56.1
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 5.5e-197 691.8 712 55.5
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 7.1e-197 691.4 691 57.5
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 1.6e-196 690.3 702 57.0
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 3.5e-196 689.1 699 59.7
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 3.5e-196 689.1 690 58.4
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 1.3e-195 687.2 684 59.9
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 5.1e-195 685.3 650 59.8
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 4.3e-194 682.2 688 60.0
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 8.2e-193 677.9 714 57.4
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 1.4e-192 677.2 703 56.9
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 2.0e-191 673.3 689 58.5
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 6.5e-190 668.3 653 61.9
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 8.4e-190 667.9 706 56.1
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 5.5e-189 665.2 696 55.7
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 3.5e-188 662.5 674 57.4
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 1.3e-187 660.6 669 60.5
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 8.7e-187 657.9 637 61.9
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 1.8e-184 650.2 699 55.2
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 3.4e-183 646.0 689 60.1
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 3.4e-183 646.0 606 59.2
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 5.9e-183 645.2 709 54.4
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 3.8e-182 642.5 703 55.0
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 1.9e-181 640.2 688 59.2
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 4.2e-181 639.0 703 54.9
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 7.2e-181 638.3 679 60.8
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.7e-180 636.3 695 54.2
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.7e-180 636.3 685 59.4
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 2.7e-180 636.3 707 55.9
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 1.1e-178 630.9 699 54.9
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 4.3e-178 629.0 656 55.0
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 1.7e-177 627.1 686 54.8
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 6.3e-177 625.2 686 57.9
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 1.2e-175 620.9 715 55.9
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 3.2e-173 612.8 693 53.7
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 1.4e-171 607.4 705 54.0
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.1e-170 604.4 515 61.9
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.6e-170 603.2 685 53.4
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.3e-170 602.8 704 53.7
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 2.2e-169 600.1 701 55.3
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 1.8e-168 597.0 557 61.9
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 1.7e-166 590.5 681 53.6
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 2.2e-166 590.1 681 53.5
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 1.6e-164 583.9 629 56.1
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 3.6e-164 582.8 708 52.1
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.4e-163 580.9 681 53.0
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 1.1e-162 577.8 702 49.3
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.4e-160 570.9 727 50.5
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 5.9e-159 565.5 704 49.0
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 6.8e-155 552.0 722 51.1
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 9.8e-154 548.1 584 55.1
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 2.4e-152 543.5 552 56.3
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 1.3e-150 537.7 569 52.7
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 6.5e-150 535.4 572 53.0
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 8.5e-150 535.0 559 55.3
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 8.0e-140 501.9 493 59.0
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 1.5e-138 497.7 559 54.6
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 3.7e-137 493.0 547 51.2
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 1.4e-136 491.1 543 51.6
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 9.8e-130 468.4 434 64.3
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 1.4e-128 464.5 583 48.9
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 2.5e-125 453.8 709 44.1
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 1.5e-109 401.4 351 62.4
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 3.1e-107 393.7 316 65.8
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 6.9e-107 392.5 325 66.5
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 3.5e-103 380.2 568 41.5
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 2.4e-99 367.5 355 59.4
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 9.0e-99 365.5 385 52.7
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 1.1e-96 358.6 351 63.8
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 5.4e-96 356.3 331 61.6
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 2.0e-82 311.2 773 32.6
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 3.4e-82 310.5 801 32.0
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 1.6e-79 301.6 366 50.3
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 4.3e-77 293.5 365 49.6
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 2.8e-60 237.7 280 52.1
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 4.8e-60 236.9 294 49.3
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 5.3e-59 233.4 349 45.0
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 3.7e-52 210.7 410 39.5
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-52 209.9 324 45.4
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 3.2e-48 197.6 180 58.3
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 4.7e-47 193.7 174 53.4
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 4.0e-46 190.7 141 70.2
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.7e-41 175.3 207 53.1
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.2e-40 170.6 126 70.6
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.8e-36 157.9 267 39.3
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 2.4e-27 128.3 136 58.8
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 2.8e-23 114.8 83 68.7
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 3.0e-22 111.3 140 49.3
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 3.2e-19 101.3 774 22.5
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 6.0e-18 97.1 78 69.2
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 2.3e-14 85.1 138 62.3


User provided reference genes

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