Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008489.1 Olea europaea HOM05D001654 ORTHO05D008085 4.4e-49 197.6 97 100.0
Oeu038049.1 Olea europaea HOM05D001654 ORTHO05D008085 7.3e-44 180.3 97 90.7
MSTRG.21710 Avicennia marina HOM05D001654 ORTHO05D008085 3.2e-39 164.9 97 80.4
Migut.D00055 Erythranthe guttata HOM05D001654 ORTHO05D008085 1.2e-38 162.9 94 80.9
SGA_v2.0_scaffold80G25718 Striga asiatica HOM05D001654 ORTHO05D008085 1.0e-37 159.8 96 80.2
SalBow3G3994 Salvia bowleyana HOM05D001654 ORTHO05D008085 1.3e-37 159.5 97 78.4
Peaxi162Scf00770g00013 Petunia axillaris HOM05D001654 ORTHO05D008085 1.7e-37 159.1 97 77.3
TWI14G0226 Tripterygium wilfordii HOM05D001654 ORTHO05D008085 2.3e-37 158.7 95 77.9
Nitab4.5_0010752g0010 Nicotiana tabacum HOM05D001654 ORTHO05D008085 3.0e-37 158.3 95 78.9
Dinv00086 Davidia involucrata HOM05D001654 ORTHO05D008085 8.7e-37 156.8 97 77.3
Dinv12117 Davidia involucrata HOM05D001654 ORTHO05D008085 8.7e-37 156.8 97 77.3
PSO210G1196 Papaver somniferum HOM05D001654 ORTHO05D008085 8.7e-37 156.8 97 75.3
PSO761G0367 Papaver somniferum HOM05D001654 ORTHO05D008085 8.7e-37 156.8 97 75.3
Lj2A1210G30 Lonicera japonica HOM05D001654 ORTHO05D008085 1.1e-36 156.4 97 76.3
CAN.G293.5 Capsicum annuum HOM05D001654 ORTHO05D008085 3.3e-36 154.8 97 75.3
Sopen01g031000 Solanum pennellii HOM05D001654 ORTHO05D008085 3.3e-36 154.8 97 75.3
FvH4_1g26790 Fragaria vesca HOM05D001654 ORTHO05D008085 5.6e-36 154.1 97 77.3
FAN23G2580 Fragaria x ananassa HOM05D001654 ORTHO05D008085 5.6e-36 154.1 97 77.3
Prupe.3G007000 Prunus persica HOM05D001654 ORTHO05D008085 5.6e-36 154.1 97 77.3
RcHm_v2.0_Chr3g0487011 Rosa chinensis HOM05D001654 ORTHO05D008085 5.6e-36 154.1 97 77.3
PGSC0003DMG400009020 Solanum tuberosum HOM05D001654 ORTHO05D008085 5.6e-36 154.1 97 74.2
Atru.chr5.945 Acer truncatum HOM05D001654 ORTHO05D008085 7.3e-36 153.7 97 73.2
DCAR_002908 Daucus carota HOM05D001654 ORTHO05D008085 1.3e-35 152.9 97 74.2
FAN28G2334 Fragaria x ananassa HOM05D001654 ORTHO05D008085 1.3e-35 152.9 97 76.3
Potri.014G117700 Populus trichocarpa HOM05D001654 ORTHO05D008085 1.3e-35 152.9 97 76.3
Sabra14G0087300 Salix brachista HOM05D001654 ORTHO05D008085 1.3e-35 152.9 97 76.3
HPP92_001223 Vanilla planifolia HOM05D000443 ORTHO05D008085 1.3e-35 152.9 97 75.3
Actinidia25865 Actinidia chinensis HOM05D001654 ORTHO05D008085 1.6e-35 152.5 97 77.3
AUR62024601 Chenopodium quinoa HOM05D001654 ORTHO05D008085 1.6e-35 152.5 97 74.2
unitig_62.g23905 Utricularia gibba HOM05D001654 ORTHO05D008085 1.6e-35 152.5 93 76.3
Hma1.2p1_0965F.1_g242120 Hydrangea macrophylla HOM05D001654 ORTHO05D008085 2.1e-35 152.1 94 76.6
ClCG09G004900 Citrullus lanatus HOM05D001654 ORTHO05D008085 2.8e-35 151.8 97 72.2
MBI19_g03284_MAGBIO Magnolia biondii HOM05D001654 ORTHO05D008085 3.6e-35 151.4 97 74.2
MELO3C015905.2 Cucumis melo HOM05D001654 ORTHO05D008085 4.8e-35 151.0 97 72.2
Nitab4.5_0000222g0090 Nicotiana tabacum HOM05D001654 ORTHO05D008085 4.8e-35 151.0 92 77.2
Potri.002G192200 Populus trichocarpa HOM05D001654 ORTHO05D008085 4.8e-35 151.0 94 76.6
AUR62011756 Chenopodium quinoa HOM05D001654 ORTHO05D008085 6.2e-35 150.6 97 72.2
Sc04g0010540 Simmondsia chinensis HOM05D001654 ORTHO05D008085 8.1e-35 150.2 97 72.2
EL10As5g23607 Beta vulgaris HOM05D001654 ORTHO05D008085 1.4e-34 149.4 97 74.2
CiPaw.07G120500 Carya illinoinensis HOM05D001654 ORTHO05D008085 1.4e-34 149.4 97 71.1
Ciclev10022131m.g Citrus clementina HOM05D001654 ORTHO05D008085 1.4e-34 149.4 97 75.3
Manes.05G012600 Manihot esculenta HOM05D001654 ORTHO05D008085 1.4e-34 149.4 94 76.6
CSS0008228 Camellia sinensis var. sinensis HOM05D001654 ORTHO05D008085 1.8e-34 149.1 98 75.5
Cc01_g21660 Coffea canephora HOM05D001654 ORTHO05D008085 2.4e-34 148.7 97 72.2
FAN19G0421 Fragaria x ananassa HOM05D001654 ORTHO05D008085 2.4e-34 148.7 97 75.3
GSVIVG01028158001 Vitis vinifera HOM05D001654 ORTHO05D008085 2.4e-34 148.7 97 74.2
Lj1g0022661 Lotus japonicus HOM05D001654 ORTHO05D008085 3.1e-34 148.3 95 73.7
MD17G1279000 Malus domestica HOM05D001654 ORTHO05D008085 3.1e-34 148.3 97 74.2
Aqoxy2G02641 Aquilegia oxysepala HOM05D001654 ORTHO05D008085 4.0e-34 147.9 92 78.3
VMungo1383G1372 Vigna mungo HOM05D001654 ORTHO05D008085 4.0e-34 147.9 97 73.2
Lalb_Chr04g0260031 Lupinus albus HOM05D001654 ORTHO05D008085 5.3e-34 147.5 97 72.2
Sed0023884 Sechium edule HOM05D001654 ORTHO05D008085 5.3e-34 147.5 97 72.2
Cpa.g.sc18.98 Carica papaya HOM05D001654 ORTHO05D008085 6.9e-34 147.1 92 73.9
HanXRQChr10g0284781 Helianthus annuus HOM05D001654 ORTHO05D008085 6.9e-34 147.1 97 72.2
Thecc.01G318700 Theobroma cacao HOM05D001654 ORTHO05D008085 6.9e-34 147.1 97 75.3
TAR365G0959 Trochodendron aralioides HOM05D001654 ORTHO05D008085 9.0e-34 146.7 97 72.2
ECA247G3538 Erigeron canadensis HOM05D001654 ORTHO05D008085 1.2e-33 146.4 97 74.2
Gohir.A12G123100 Gossypium hirsutum HOM05D001654 ORTHO05D008085 1.2e-33 146.4 97 73.2
Gorai.008G137600 Gossypium raimondii HOM05D001654 ORTHO05D008085 1.2e-33 146.4 97 73.2
QL12p018829 Quercus lobata HOM05D001654 ORTHO05D008085 1.2e-33 146.4 96 72.9
Cfa001520 Carpinus fangiana HOM05D001654 ORTHO05D008085 1.5e-33 146.0 97 70.1
Haze_17021 Corylus avellana HOM05D001654 ORTHO05D008085 1.5e-33 146.0 97 70.1
Rhsim01G0292400 Rhododendron simsii HOM05D001654 ORTHO05D008085 1.5e-33 146.0 97 74.2
CDE11G0536 Ceratophyllum demersum HOM05D001654 ORTHO05D008085 2.6e-33 145.2 94 73.4
Gohir.D12G126700 Gossypium hirsutum HOM05D001654 ORTHO05D008085 2.6e-33 145.2 97 72.2
vmacro15099 Vaccinium macrocarpon HOM05D001654 ORTHO05D008085 2.6e-33 145.2 92 76.1
Phvul.001G214800 Phaseolus vulgaris HOM05D001654 ORTHO05D008085 3.4e-33 144.8 95 73.7
Duzib138G0592 Durio zibethinus HOM05D001654 ORTHO05D008085 4.5e-33 144.4 97 73.2
Lsat_1_v5_gn_8_76661 Lactuca sativa HOM05D001654 ORTHO05D008085 4.5e-33 144.4 97 73.2
Psat3g019000 Pisum sativum HOM05D001654 ORTHO05D008085 4.5e-33 144.4 98 71.4
MD09G1286600 Malus domestica HOM05D001654 ORTHO05D008085 5.8e-33 144.1 97 74.2
PGR083G0503 Punica granatum HOM05D001654 ORTHO05D008085 7.6e-33 143.7 97 72.2
TPR.G4072 Trifolium pratense HOM05D001654 ORTHO05D008085 7.6e-33 143.7 98 71.4
CANSAT25G2218 Cannabis sativa HOM05D001654 ORTHO05D008085 9.9e-33 143.3 92 73.9
Eucgr.H00910 Eucalyptus grandis HOM05D001654 ORTHO05D008085 9.9e-33 143.3 97 70.1
arahy.Tifrunner.gnm1.ann1.ZIY6TR Arachis hypogaea HOM05D001654 ORTHO05D008085 1.7e-32 142.5 94 73.4
Medtr7g109850 Medicago truncatula HOM05D001654 ORTHO05D008085 1.7e-32 142.5 98 70.4
Ca_09225_v3 Cicer arietinum L. HOM05D001654 ORTHO05D008085 2.2e-32 142.1 98 70.4
arahy.Tifrunner.gnm1.ann1.T1V4H7 Arachis hypogaea HOM05D001654 ORTHO05D008085 2.9e-32 141.7 94 72.3
Glyma.19G218400 Glycine max HOM05D001654 ORTHO05D008085 2.9e-32 141.7 95 71.6
COL.COLO4_23188 Corchorus olitorius HOM05D001654 ORTHO05D008085 8.4e-32 140.2 97 72.2
ATR0693G051 Amborella trichopoda HOM05D001654 ORTHO05D008085 1.4e-31 139.4 95 70.5
BcaB01g02401 Brassica carinata HOM05D001654 ORTHO05D008085 1.4e-31 139.4 97 70.1
BraA03t12316Z Brassica rapa HOM05D001654 ORTHO05D008085 1.4e-31 139.4 97 70.1
Aa31LG5G1590 Aethionema arabicum HOM05D001654 ORTHO05D008085 1.9e-31 139.0 97 69.1
AL6G51350 Arabidopsis lyrata HOM05D001654 ORTHO05D008085 1.9e-31 139.0 97 69.1
Carub.0006s3529 Capsella rubella HOM05D001654 ORTHO05D008085 1.9e-31 139.0 97 69.1
AT4G01940 Arabidopsis thaliana HOM05D001654 ORTHO05D008085 2.4e-31 138.7 97 69.1
BcaC01g06789 Brassica carinata HOM05D001654 ORTHO05D008085 3.2e-31 138.3 97 69.1
A03p31360 Brassica napus HOM05D001654 ORTHO05D008085 3.2e-31 138.3 97 70.1
C03p38270 Brassica napus HOM05D001654 ORTHO05D008085 3.2e-31 138.3 97 69.1
BolC3t16108H Brassica oleracea HOM05D001654 ORTHO05D008085 3.2e-31 138.3 97 69.1
Sp6g01820 Schrenkiella parvula HOM05D001654 ORTHO05D008085 3.2e-31 138.3 97 69.1
CARHR249740 Cardamine hirsuta HOM05D001654 ORTHO05D008085 5.4e-31 137.5 97 68.0
Thhalv10028839m.g Eutrema salsugineum HOM05D001654 ORTHO05D008085 1.2e-30 136.3 97 67.0
THA.LOC104801311 Tarenaya hassleriana HOM05D001654 ORTHO05D008085 2.1e-30 135.6 98 69.4
Os03g0314700 Oryza sativa ssp. japonica HOM05D001654 ORTHO05D008085 1.0e-29 133.3 96 67.7
Zm00001eb015070 Zea mays HOM05D001654 ORTHO05D008085 3.0e-29 131.7 97 66.0
SEGI_41551 Sequoiadendron giganteum HOM05D001654 ORTHO05D008085 4.3e-28 127.9 96 62.5
AagrBONN_evm.TU.Sc2ySwM_344.4644 Anthoceros agrestis HOM05D001654 ORTHO05D008085 1.7e-24 115.9 94 59.6
Pp3c2_23200 Physcomitrium patens HOM05D001654 ORTHO05D008085 2.7e-22 108.6 91 58.2
Mapoly0190s0016 Marchantia polymorpha HOM05D001654 ORTHO05D008085 3.0e-21 105.1 91 57.1
CBR_g4584 Chara braunii HOM05D001654 ORTHO05D008085 1.9e-20 102.4 92 52.2
SMO118G0472 Selaginella moellendorffii HOM05D001654 ORTHO05D008085 1.8e-18 95.9 91 48.4
SMO144G0019 Selaginella moellendorffii HOM05D001654 ORTHO05D008085 1.8e-18 95.9 91 48.4
Cre17.g710800 Chlamydomonas reinhardtii HOM05D001654 ORTHO05D008085 1.1e-15 86.7 86 47.7
Solyc01g079220.4 Solanum lycopersicum HOM05D001654 ORTHO05D008085 4.6e-14 81.3 49 79.6
PRCOL_00005187 Prasinoderma coloniale HOM05D001654 ORTHO05D008085 7.4e-12 73.9 104 30.8
Hma1.2p1_0965F.1_g242110 Hydrangea macrophylla HOM05D001654 ORTHO05D008085 1.4e-07 59.7 34 82.4
RcHm_v2.0_Chr1g0346861 Rosa chinensis HOM05D001654 ORTHO05D008085 4.2e-07 58.2 39 71.8
RcHm_v2.0_Chr4g0387891 Rosa chinensis HOM05D001654 ORTHO05D008085 2.7e-06 55.5 39 69.2


User provided reference genes

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