Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 1.6e-65 252.7 135 100.0
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 1.9e-26 122.9 69 100.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 5.4e-21 104.8 69 84.1
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 4.6e-20 101.7 71 77.5
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 6.0e-20 101.3 69 84.1
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.3e-19 100.1 69 79.7
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.0e-19 99.0 64 87.5
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 3.9e-19 98.6 79 73.4
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.1e-19 98.2 69 78.3
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 5.1e-19 98.2 69 78.3
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 5.1e-19 98.2 69 78.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 6.7e-19 97.8 69 76.8
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 6.7e-19 97.8 69 78.3
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 8.7e-19 97.4 63 85.7
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.9e-18 96.3 74 71.6
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 2.5e-18 95.9 69 75.4
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 3.3e-18 95.5 69 76.8
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 3.3e-18 95.5 69 73.9
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 4.3e-18 95.1 71 71.8
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 5.6e-18 94.7 69 73.9
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 5.6e-18 94.7 69 75.4
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 7.4e-18 94.4 69 73.9
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 7.4e-18 94.4 69 73.9
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 7.4e-18 94.4 69 78.3
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 9.6e-18 94.0 69 73.9
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 9.6e-18 94.0 70 80.0
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 9.6e-18 94.0 70 80.0
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 9.6e-18 94.0 69 78.3
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.6e-17 93.2 69 75.4
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 2.1e-17 92.8 69 72.5
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 2.8e-17 92.4 69 76.8
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 2.8e-17 92.4 69 76.8
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 3.6e-17 92.0 70 77.1
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 4.8e-17 91.7 69 73.9
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 8.1e-17 90.9 70 75.7
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 1.8e-16 89.7 68 73.5
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-16 89.7 68 73.5
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 2.4e-16 89.4 69 69.6
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 3.1e-16 89.0 70 74.3
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 3.1e-16 89.0 68 73.5
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 4.0e-16 88.6 69 69.6
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 9.0e-16 87.4 68 75.0
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.2e-15 87.0 65 75.4
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 1.2e-15 87.0 59 81.4
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.2e-15 87.0 55 89.1
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.5e-15 86.7 70 77.1
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.5e-15 86.7 66 75.8
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.6e-15 85.9 65 73.8
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 3.4e-15 85.5 68 75.0
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 3.4e-15 85.5 69 66.7
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 4.5e-15 85.1 69 69.6
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.5e-15 85.1 69 69.6
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 4.5e-15 85.1 69 69.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 4.5e-15 85.1 70 70.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 4.5e-15 85.1 69 69.6
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 4.5e-15 85.1 67 70.1
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 4.5e-15 85.1 67 70.1
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 5.8e-15 84.7 69 66.7
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 5.8e-15 84.7 69 73.9
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 5.8e-15 84.7 70 75.7
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 7.6e-15 84.3 69 75.4
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 7.6e-15 84.3 64 73.4
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 9.9e-15 84.0 58 82.8
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 9.9e-15 84.0 69 69.6
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 9.9e-15 84.0 70 70.0
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 9.9e-15 84.0 66 72.7
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.7e-14 83.2 68 72.1
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.7e-14 83.2 71 64.8
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 2.2e-14 82.8 68 70.6
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.9e-14 82.4 69 66.7
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 3.8e-14 82.0 68 69.1
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 4.9e-14 81.6 68 70.6
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 4.9e-14 81.6 68 70.6
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 4.9e-14 81.6 68 70.6
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 4.9e-14 81.6 68 70.6
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 4.9e-14 81.6 68 70.6
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 4.9e-14 81.6 68 70.6
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 4.9e-14 81.6 59 78.0
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 8.4e-14 80.9 75 66.7
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 8.4e-14 80.9 57 82.5
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-13 80.5 68 69.1
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.1e-13 80.5 71 73.2
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 1.4e-13 80.1 68 69.1
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.4e-13 80.1 68 69.1
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 1.4e-13 80.1 68 69.1
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 1.4e-13 80.1 69 68.1
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.9e-13 79.7 68 69.1
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.9e-13 79.7 64 71.9
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 2.4e-13 79.3 68 69.1
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.4e-13 79.3 68 66.2
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 4.2e-13 78.6 58 77.6
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 4.2e-13 78.6 59 72.9
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 5.5e-13 78.2 69 65.2
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 7.1e-13 77.8 68 67.6
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 7.1e-13 77.8 68 66.2
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 9.3e-13 77.4 70 65.7
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 9.3e-13 77.4 64 75.0
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.2e-12 77.0 68 67.6
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 3.5e-12 75.5 82 58.5
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 3.5e-12 75.5 59 71.2
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 6.0e-12 74.7 63 71.4
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-11 73.9 59 69.5
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 1.0e-11 73.9 59 69.5
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.8e-11 73.2 59 69.5
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 3.0e-11 72.4 58 75.9
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 3.9e-11 72.0 59 67.8
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 8.7e-11 70.9 60 70.0
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 3.3e-10 68.9 68 63.2
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 5.6e-10 68.2 59 67.8
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 1.6e-09 66.6 67 58.2
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 8.2e-09 64.3 71 57.7
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.1e-08 63.9 48 77.1
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 2.4e-08 62.8 55 67.3
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 2.4e-08 62.8 70 51.4
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 3.1e-08 62.4 71 56.3
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 2.0e-07 59.7 44 72.7
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 5.8e-07 58.2 81 50.6
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 7.6e-07 57.8 44 70.5
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.7e-06 56.6 43 76.7
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.7e-06 56.6 60 56.7
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.9e-06 55.8 40 80.0
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 2.9e-06 55.8 44 68.2


User provided reference genes

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