Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007995.1 Olea europaea HOM05D004295 ORTHO05D004901 6.0e-60 233.8 105 100.0
Migut.M01703 Erythranthe guttata HOM05D004295 ORTHO05D004901 6.3e-41 170.6 105 72.4
SGA_v2.0_scaffold168G38508 Striga asiatica HOM05D004295 ORTHO05D004901 8.2e-41 170.2 106 73.6
CAN.G337.52 Capsicum annuum HOM05D004295 ORTHO05D004901 2.0e-39 165.6 103 71.8
MSTRG.6962 Avicennia marina HOM05D004295 ORTHO05D004901 3.4e-39 164.9 103 71.8
Dinv40798 Davidia involucrata HOM05D004295 ORTHO05D004901 7.7e-39 163.7 103 71.8
CSS0006554 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 5.0e-38 161.0 105 68.6
CSS0022956 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 5.0e-38 161.0 105 68.6
Oeu005986.1 Olea europaea HOM05D004295 ORTHO05D004901 2.5e-37 158.7 93 78.5
Solyc07g065000.3 Solanum lycopersicum HOM05D004295 ORTHO05D004901 7.2e-37 157.1 105 69.5
Sopen07g033210 Solanum pennellii HOM05D004295 ORTHO05D004901 9.4e-37 156.8 105 69.5
PGSC0003DMG402022202 Solanum tuberosum HOM05D004295 ORTHO05D004901 9.4e-37 156.8 105 68.6
CSS0023200 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 1.2e-36 156.4 103 68.9
Cc05_g14350 Coffea canephora HOM05D004295 ORTHO05D004901 1.6e-36 156.0 105 63.8
Cfa020273 Carpinus fangiana HOM05D004295 ORTHO05D004901 2.1e-36 155.6 103 66.0
Prupe.4G224000 Prunus persica HOM05D004295 ORTHO05D004901 1.0e-35 153.3 103 65.0
QL08p007634 Quercus lobata HOM05D004295 ORTHO05D004901 3.0e-35 151.8 102 63.7
Actinidia37373 Actinidia chinensis HOM05D004295 ORTHO05D004901 3.9e-35 151.4 103 63.1
CANSAT11G1231 Cannabis sativa HOM05D004295 ORTHO05D004901 1.5e-34 149.4 103 62.1
Sopen12g007410 Solanum pennellii HOM05D004295 ORTHO05D004901 9.7e-34 146.7 105 61.0
HanXRQChr05g0159731 Helianthus annuus HOM05D004295 ORTHO05D004901 1.3e-33 146.4 105 61.9
CiPaw.11G195000 Carya illinoinensis HOM05D004295 ORTHO05D004901 1.7e-33 146.0 102 62.7
Ciclev10007504m.g Citrus clementina HOM05D004295 ORTHO05D004901 1.7e-33 146.0 103 60.2
TAR724G0001 Trochodendron aralioides HOM05D004295 ORTHO05D004901 1.7e-33 146.0 103 62.1
Solyc12g014540.2 Solanum lycopersicum HOM05D004295 ORTHO05D004901 2.2e-33 145.6 105 61.0
TWI39G0230 Tripterygium wilfordii HOM05D004295 ORTHO05D004901 1.1e-32 143.3 103 62.1
ECA246G1209 Erigeron canadensis HOM05D004295 ORTHO05D004901 1.4e-32 142.9 105 60.0
MD11G1209200 Malus domestica HOM05D004295 ORTHO05D004901 1.4e-32 142.9 102 60.8
HanXRQChr13g0408281 Helianthus annuus HOM05D004295 ORTHO05D004901 2.4e-32 142.1 109 59.6
Nn7g37915 Nelumbo nucifera HOM05D004295 ORTHO05D004901 3.1e-32 141.7 103 59.2
GSVIVG01037731001 Vitis vinifera HOM05D004295 ORTHO05D004901 3.1e-32 141.7 100 63.0
TWI38G1745 Tripterygium wilfordii HOM05D004295 ORTHO05D004901 4.1e-32 141.4 104 62.5
Atru.chr2.3536 Acer truncatum HOM05D004295 ORTHO05D004901 7.0e-32 140.6 103 60.2
MD03G1193000 Malus domestica HOM05D004295 ORTHO05D004901 7.0e-32 140.6 102 60.8
COL.COLO4_09741 Corchorus olitorius HOM05D004295 ORTHO05D004901 9.1e-32 140.2 103 61.2
DCAR_013201 Daucus carota HOM05D004295 ORTHO05D004901 9.1e-32 140.2 103 57.3
CAN.G791.3 Capsicum annuum HOM05D004295 ORTHO05D004901 1.2e-31 139.8 103 61.2
Thecc.07G027600 Theobroma cacao HOM05D004295 ORTHO05D004901 1.2e-31 139.8 103 61.2
DCAR_022592 Daucus carota HOM05D004295 ORTHO05D004901 2.0e-31 139.0 103 58.3
FvH4_3g23572 Fragaria vesca HOM05D004295 ORTHO05D004901 2.0e-31 139.0 103 61.2
Manes.15G066000 Manihot esculenta HOM05D004295 ORTHO05D004901 2.0e-31 139.0 102 58.8
RcHm_v2.0_Chr5g0041571 Rosa chinensis HOM05D004295 ORTHO05D004901 2.0e-31 139.0 103 60.2
Atru.chr2.3555 Acer truncatum HOM05D004295 ORTHO05D004901 2.6e-31 138.7 103 59.2
ECA240G3846 Erigeron canadensis HOM05D004295 ORTHO05D004901 3.5e-31 138.3 105 60.0
TAR629G3495 Trochodendron aralioides HOM05D004295 ORTHO05D004901 3.5e-31 138.3 91 67.0
Nn1g03330 Nelumbo nucifera HOM05D004295 ORTHO05D004901 5.9e-31 137.5 103 58.3
Aqoxy1G04109 Aquilegia oxysepala HOM05D004295 ORTHO05D004901 1.0e-30 136.7 103 59.2
Gohir.D08G034800 Gossypium hirsutum HOM05D004295 ORTHO05D004901 2.9e-30 135.2 103 59.2
Gorai.004G032700 Gossypium raimondii HOM05D004295 ORTHO05D004901 2.9e-30 135.2 103 59.2
Haze_09750 Corylus avellana HOM05D004295 ORTHO05D004901 8.5e-30 133.7 91 64.8
Potri.001G358900 Populus trichocarpa HOM05D004295 ORTHO05D004901 1.1e-29 133.3 102 55.9
Gohir.A08G024300 Gossypium hirsutum HOM05D004295 ORTHO05D004901 2.5e-29 132.1 103 58.3
Eucgr.F03507 Eucalyptus grandis HOM05D004295 ORTHO05D004901 4.2e-29 131.3 103 56.3
Rhsim04G0016300 Rhododendron simsii HOM05D004295 ORTHO05D004901 7.2e-29 130.6 91 64.8
vmacro09687 Vaccinium macrocarpon HOM05D004295 ORTHO05D004901 1.2e-28 129.8 91 64.8
PSO302G0053 Papaver somniferum HOM05D004295 ORTHO05D004901 2.1e-28 129.0 103 55.3
Hma1.2p1_0036F.1_g023080 Hydrangea macrophylla HOM05D004295 ORTHO05D004901 8.0e-28 127.1 99 59.6
PSO210G3166 Papaver somniferum HOM05D004295 ORTHO05D004901 2.3e-27 125.6 103 54.4
PGR031G2569 Punica granatum HOM05D004295 ORTHO05D004901 8.8e-27 123.6 103 55.3
Dinv22227 Davidia involucrata HOM05D004295 ORTHO05D004901 2.6e-26 122.1 74 75.7
Phvul.008G272900 Phaseolus vulgaris HOM05D004295 ORTHO05D004901 3.3e-26 121.7 102 52.9
FAN21G2245 Fragaria x ananassa HOM05D004295 ORTHO05D004901 4.4e-26 121.3 92 59.8
Glyma.02G295400 Glycine max HOM05D004295 ORTHO05D004901 5.7e-26 120.9 102 52.0
arahy.Tifrunner.gnm1.ann1.9RR6WG Arachis hypogaea HOM05D004295 ORTHO05D004901 9.7e-26 120.2 103 50.5
arahy.Tifrunner.gnm1.ann1.WPCM0F Arachis hypogaea HOM05D004295 ORTHO05D004901 9.7e-26 120.2 103 50.5
Sc16g0005710 Simmondsia chinensis HOM05D004295 ORTHO05D004901 1.7e-25 119.4 99 54.5
Lalb_Chr10g0107181 Lupinus albus HOM05D004295 ORTHO05D004901 2.8e-25 118.6 103 50.5
Nitab4.5_0001160g0060 Nicotiana tabacum HOM05D004295 ORTHO05D004901 3.7e-25 118.2 88 61.4
LjContig00272g0028044 Lotus japonicus HOM05D004295 ORTHO05D004901 4.8e-25 117.9 103 48.5
Hund01951 Selenicereus undatus HOM05D004295 ORTHO05D004901 4.8e-25 117.9 105 53.3
Nitab4.5_0005221g0010 Nicotiana tabacum HOM05D004295 ORTHO05D004901 8.2e-25 117.1 88 60.2
Lsat_1_v5_gn_5_2601 Lactuca sativa HOM05D004295 ORTHO05D004901 1.1e-24 116.7 88 60.2
AUR62020337 Chenopodium quinoa HOM05D004295 ORTHO05D004901 2.4e-24 115.5 99 51.5
AUR62015886 Chenopodium quinoa HOM05D004295 ORTHO05D004901 7.0e-24 114.0 99 50.5
Glyma.14G018000 Glycine max HOM05D004295 ORTHO05D004901 9.1e-24 113.6 102 49.0
Sabra16G0236700 Salix brachista HOM05D004295 ORTHO05D004901 1.2e-23 113.2 92 53.3
Cpa.g.sc12.236 Carica papaya HOM05D004295 ORTHO05D004901 1.6e-23 112.8 89 57.3
Ah.06g182200 Amaranthus hybridus HOM05D004295 ORTHO05D004901 4.5e-23 111.3 99 48.5
Medtr5g093940 Medicago truncatula HOM05D004295 ORTHO05D004901 1.7e-22 109.4 102 46.1
Ca_06350_v3 Cicer arietinum L. HOM05D004295 ORTHO05D004901 6.5e-22 107.5 102 46.1
Nitab4.5_0003989g0010 Nicotiana tabacum HOM05D004295 ORTHO05D004901 8.5e-22 107.1 88 55.7
Psat2g010080 Pisum sativum HOM05D004295 ORTHO05D004901 1.1e-21 106.7 102 45.1
VMungo0647G0514 Vigna mungo HOM05D004295 ORTHO05D004901 1.1e-21 106.7 94 50.0
SMO356G0590 Selaginella moellendorffii HOM05D004295 ORTHO05D004901 1.9e-21 105.9 104 44.2
MBI16_g42268_MAGBIO Magnolia biondii HOM05D004295 ORTHO05D004901 3.2e-21 105.1 89 51.7
TPR.G30656 Trifolium pratense HOM05D004295 ORTHO05D004901 4.2e-21 104.8 102 44.1
Mapoly0085s0079 Marchantia polymorpha HOM05D004295 ORTHO05D004901 5.5e-21 104.4 105 44.8
TAR626G0993 Trochodendron aralioides HOM05D004295 ORTHO05D004901 1.2e-20 103.2 103 47.6
Peaxi162Scf00339g01131 Petunia axillaris HOM05D004295 ORTHO05D004901 1.6e-20 102.8 106 50.0
FAN11G1876 Fragaria x ananassa HOM05D004295 ORTHO05D004901 1.8e-19 99.4 77 61.0
EL10Ac4g07685 Beta vulgaris HOM05D004295 ORTHO05D004901 6.8e-19 97.4 69 60.9
SHI26565 Sapria himalayana HOM05D004295 ORTHO05D004901 3.7e-17 91.7 79 51.9
unitig_62.g23290 Utricularia gibba HOM05D004295 ORTHO05D004901 6.3e-17 90.9 66 56.1
ATR0561G279 Amborella trichopoda HOM05D004295 ORTHO05D004901 1.2e-15 86.7 93 41.9
Peaxi162Scf00235g00827 Petunia axillaris HOM05D004295 ORTHO05D004901 1.6e-15 86.3 89 51.7
CiPaw.12G133900 Carya illinoinensis HOM05D004295 ORTHO05D004901 8.5e-14 80.5 80 50.0
Lj8A173T74 Lonicera japonica HOM05D004295 ORTHO05D004901 8.5e-14 80.5 53 64.2
Os06g0309000 Oryza sativa ssp. japonica HOM05D004295 ORTHO05D004901 1.1e-13 80.1 103 35.0
Pp3c24_16720 Physcomitrium patens HOM05D004295 ORTHO05D004901 3.2e-13 78.6 89 42.7
CsaV3_3G004720 Cucumis sativus L. HOM05D004295 ORTHO05D004901 8.0e-12 73.9 84 42.9
MELO3C014171.2 Cucumis melo HOM05D004295 ORTHO05D004901 1.0e-11 73.6 84 42.9
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 4.0e-11 71.6 52 55.8
AagrBONN_evm.TU.Sc2ySwM_344.2809 Anthoceros agrestis HOM05D004295 ORTHO05D004901 3.4e-10 68.6 94 35.1
Actinidia10753 Actinidia chinensis HOM05D004295 ORTHO05D004901 5.7e-10 67.8 37 73.0
Sed0002209 Sechium edule HOM05D004295 ORTHO05D004901 5.7e-10 67.8 79 41.8
SEGI_19418 Sequoiadendron giganteum HOM05D004295 ORTHO05D004901 2.4e-08 62.4 73 39.7
Psat0s5g0080 Pisum sativum HOM05D004295 ORTHO05D004901 9.2e-08 60.5 49 53.1
Psat0s5g0040 Pisum sativum HOM05D004295 ORTHO05D004901 7.7e-07 57.4 49 51.0
Nitab4.5_0002338g0050 Nicotiana tabacum HOM05D004295 ORTHO05D004901 5.0e-06 54.7 37 54.1
CDE04G3193 Ceratophyllum demersum HOM05D004295 ORTHO05D004901 6.6e-06 54.3 81 38.3


User provided reference genes

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