Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.5e-302 1042.0 509 100.0
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 1.1e-207 726.9 509 70.7
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 5.1e-205 718.0 512 70.5
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.7e-200 703.0 514 69.1
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 3.6e-198 695.3 511 68.7
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 3.9e-197 691.8 495 69.3
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 3.1e-194 682.2 497 69.2
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 6.9e-194 681.0 507 66.9
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.7e-192 676.4 470 70.6
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 7.9e-190 667.5 499 66.5
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 7.9e-190 667.5 548 63.5
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.4e-189 666.8 483 69.6
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 2.3e-189 666.0 499 65.5
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 3.9e-189 665.2 491 65.8
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 3.9e-189 665.2 499 66.9
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.1e-188 663.7 499 66.5
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 7.4e-188 661.0 501 66.1
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 9.7e-188 660.6 500 66.8
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 2.2e-187 659.4 495 66.3
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 6.3e-187 657.9 494 67.0
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 6.3e-187 657.9 493 65.3
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.4e-186 656.0 495 66.3
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 2.4e-186 656.0 495 66.3
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 4.1e-186 655.2 505 65.0
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 9.1e-186 654.1 494 64.4
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.5e-185 653.3 494 66.0
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.0e-184 650.6 503 65.4
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 2.2e-184 649.4 475 67.8
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 2.2e-184 649.4 493 64.7
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 5.0e-184 648.3 475 67.6
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 6.5e-184 647.9 498 64.5
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 9.4e-183 644.0 496 66.5
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 9.4e-183 644.0 493 64.5
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.7e-182 642.5 498 64.1
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.4e-181 640.2 501 65.1
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 3.0e-181 639.0 501 64.3
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 3.0e-181 639.0 501 64.7
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 2.6e-180 636.0 495 65.7
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.6e-180 636.0 485 66.2
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 5.7e-180 634.8 524 62.6
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 7.4e-180 634.4 501 65.3
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.3e-179 633.6 496 63.7
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 8.2e-179 630.9 475 66.1
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.8e-178 629.8 497 62.2
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 3.1e-178 629.0 499 64.1
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 2.9e-176 622.5 468 67.9
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 2.5e-175 619.4 493 65.1
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 4.2e-175 618.6 525 60.8
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 5.5e-175 618.2 502 61.8
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 5.5e-175 618.2 503 61.8
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 2.7e-174 615.9 516 62.2
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 2.7e-174 615.9 507 62.1
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 8.0e-174 614.4 494 63.2
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 5.2e-173 611.7 485 62.1
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.6e-172 609.4 511 63.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 4.4e-172 608.6 493 62.7
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 7.5e-172 607.8 506 61.7
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 9.7e-172 607.4 511 60.5
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.7e-172 607.4 449 66.1
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 1.1e-170 604.0 499 60.3
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 3.1e-170 602.4 499 60.7
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 3.1e-170 602.4 493 62.1
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.1e-170 602.1 452 66.4
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 7.0e-170 601.3 496 61.9
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.2e-169 600.5 449 65.5
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 5.0e-168 595.1 492 61.4
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.5e-167 593.6 495 61.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.9e-167 593.2 497 61.2
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 9.4e-167 590.9 495 61.0
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.2e-166 590.5 469 63.1
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 2.1e-166 589.7 494 60.1
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.4e-165 587.0 494 59.9
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 2.6e-164 582.8 472 62.7
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.4e-164 582.4 461 64.9
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 1.3e-163 580.5 493 60.0
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 1.3e-163 580.5 493 60.0
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.7e-163 580.1 484 59.5
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 2.8e-163 579.3 501 59.1
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 6.3e-163 578.2 501 61.5
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.1e-162 577.4 500 59.4
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.2e-161 573.9 495 59.8
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.6e-161 573.5 453 62.5
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 3.5e-161 572.4 487 61.8
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 6.6e-160 568.2 506 59.7
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 6.6e-160 568.2 523 55.3
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 2.5e-159 566.2 519 59.7
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 9.5e-159 564.3 498 58.6
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 3.1e-154 549.3 489 59.7
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.2e-153 547.4 494 57.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 4.7e-150 535.4 458 60.5
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.4e-149 533.9 512 54.9
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.3e-147 527.3 490 56.1
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 7.5e-140 501.5 498 53.8
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 7.5e-140 501.5 498 53.8
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 1.6e-137 493.8 510 52.2
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 5.1e-136 488.8 498 54.4
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 5.6e-135 485.3 447 57.9
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 3.1e-125 453.0 495 52.3
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 3.4e-124 449.5 488 47.5
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.3e-123 447.6 559 44.9
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.7e-123 447.2 316 69.3
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 3.5e-121 439.5 545 46.1
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 8.4e-115 418.3 414 53.9
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.0e-112 409.8 379 58.0
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 3.6e-110 402.9 352 60.8
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.3e-104 383.6 401 51.1
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 6.2e-102 375.6 488 44.3
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 1.8e-101 374.0 310 63.9
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.2e-100 371.3 497 43.5
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 6.7e-80 302.4 289 53.3
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.9e-64 250.0 145 80.0
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 5.2e-64 249.6 306 48.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 7.0e-61 239.2 506 31.8
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 2.9e-59 233.8 401 35.2
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.2e-47 195.3 850 23.3
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 9.8e-39 165.6 333 31.5
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 9.8e-39 165.6 146 59.6
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.7e-35 154.8 95 75.8
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.2e-33 148.7 161 54.0
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.2e-30 137.9 77 81.8
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.0e-19 102.4 143 44.8
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 1.3e-11 75.5 95 45.3
Oeu020247.1 Olea europaea HOM05D006341 ORTHO05D288002 6.2e-09 66.6 40 75.0


User provided reference genes

Program Settings