Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu006323.1 Olea europaea HOM05D005205 ORTHO05D006155 1.3e-175 619.8 346 100.0
Oeu027937.2 Olea europaea HOM05D005205 ORTHO05D006155 1.8e-132 476.5 419 70.9
SGA_v2.0_scaffold34G13663 Striga asiatica HOM05D005205 ORTHO05D006155 3.7e-122 442.2 303 76.6
MSTRG.2087 Avicennia marina HOM05D005205 ORTHO05D006155 2.7e-117 426.0 333 73.3
Cc11_g00390 Coffea canephora HOM05D005205 ORTHO05D006155 2.6e-115 419.5 256 82.4
Actinidia18451 Actinidia chinensis HOM05D005205 ORTHO05D006155 1.8e-113 413.3 261 80.5
Migut.E00589 Erythranthe guttata HOM05D005205 ORTHO05D006155 1.6e-112 410.2 345 66.1
Dinv17655 Davidia involucrata HOM05D005205 ORTHO05D006155 7.7e-112 407.9 261 78.9
CSS0009404 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 5.5e-110 401.7 262 79.0
Manes.04G160800 Manihot esculenta HOM05D005205 ORTHO05D006155 5.5e-110 401.7 256 79.7
CSS0028662 Camellia sinensis var. sinensis HOM05D005205 ORTHO05D006155 9.4e-110 401.0 262 79.0
Thecc.02G152000 Theobroma cacao HOM05D005205 ORTHO05D006155 1.2e-109 400.6 259 79.2
Ciclev10015886m.g Citrus clementina HOM05D005205 ORTHO05D006155 1.6e-109 400.2 259 78.0
SalBow2G1531 Salvia bowleyana HOM05D005205 ORTHO05D006155 2.1e-109 399.8 306 71.2
TWI53G0012 Tripterygium wilfordii HOM05D005205 ORTHO05D006155 8.0e-109 397.9 258 76.7
Duzib248G0811 Durio zibethinus HOM05D005205 ORTHO05D006155 1.4e-108 397.1 260 78.5
MD16G1004900 Malus domestica HOM05D005205 ORTHO05D006155 1.8e-108 396.7 261 75.9
DCAR_023495 Daucus carota HOM05D005205 ORTHO05D006155 2.3e-108 396.4 258 78.7
FvH4_4g37340 Fragaria vesca HOM05D005205 ORTHO05D006155 1.2e-107 394.0 256 78.1
Solyc02g049070.4 Solanum lycopersicum HOM05D005205 ORTHO05D006155 1.2e-107 394.0 255 77.6
Gorai.005G213800 Gossypium raimondii HOM05D005205 ORTHO05D006155 1.5e-107 393.7 258 77.5
CiPaw.16G000600 Carya illinoinensis HOM05D005205 ORTHO05D006155 3.3e-107 392.5 260 78.1
Gohir.D02G191000 Gossypium hirsutum HOM05D005205 ORTHO05D006155 3.3e-107 392.5 258 77.5
Prupe.1G351900 Prunus persica HOM05D005205 ORTHO05D006155 3.3e-107 392.5 258 76.0
RcHm_v2.0_Chr4g0447201 Rosa chinensis HOM05D005205 ORTHO05D006155 4.4e-107 392.1 259 76.8
Sopen02g008300 Solanum pennellii HOM05D005205 ORTHO05D006155 4.4e-107 392.1 253 77.9
ClCG11G012770 Citrullus lanatus HOM05D005205 ORTHO05D006155 9.7e-107 391.0 257 76.3
FAN17G1859 Fragaria x ananassa HOM05D005205 ORTHO05D006155 9.7e-107 391.0 256 77.3
COL.COLO4_33151 Corchorus olitorius HOM05D005205 ORTHO05D006155 1.3e-106 390.6 255 78.0
THA.LOC104800388 Tarenaya hassleriana HOM05D005205 ORTHO05D006155 1.3e-106 390.6 261 75.5
TAR622G1118 Trochodendron aralioides HOM05D005205 ORTHO05D006155 1.3e-106 390.6 258 76.4
Lj3A844T51 Lonicera japonica HOM05D005205 ORTHO05D006155 1.7e-106 390.2 259 76.4
PGR044G0613 Punica granatum HOM05D005205 ORTHO05D006155 1.7e-106 390.2 258 76.0
GSVIVG01034351001 Vitis vinifera HOM05D005205 ORTHO05D006155 1.7e-106 390.2 258 76.4
Potri.010G254800 Populus trichocarpa HOM05D005205 ORTHO05D006155 2.2e-106 389.8 265 76.6
QL01p000318 Quercus lobata HOM05D005205 ORTHO05D006155 2.8e-106 389.4 259 76.8
Gohir.A03G167900 Gossypium hirsutum HOM05D005205 ORTHO05D006155 3.7e-106 389.0 258 76.7
Duzib052G0598 Durio zibethinus HOM05D005205 ORTHO05D006155 8.2e-106 387.9 256 77.7
FAN07G0818 Fragaria x ananassa HOM05D005205 ORTHO05D006155 1.1e-105 387.5 256 76.6
Atru.chr11.38 Acer truncatum HOM05D005205 ORTHO05D006155 1.4e-105 387.1 258 74.4
Nitab4.5_0003034g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 1.4e-105 387.1 253 76.7
MD13G1000800 Malus domestica HOM05D005205 ORTHO05D006155 1.8e-105 386.7 261 75.5
Nn3g18536 Nelumbo nucifera HOM05D005205 ORTHO05D006155 2.4e-105 386.3 259 74.5
Eucgr.J00330 Eucalyptus grandis HOM05D005205 ORTHO05D006155 4.1e-105 385.6 258 74.8
PSO782G4176 Papaver somniferum HOM05D005205 ORTHO05D006155 4.1e-105 385.6 261 74.3
MBI03_g11900_MAGBIO Magnolia biondii HOM05D005205 ORTHO05D006155 5.3e-105 385.2 257 73.9
PSO063G1005 Papaver somniferum HOM05D005205 ORTHO05D006155 9.1e-105 384.4 261 73.9
Nitab4.5_0000067g0040 Nicotiana tabacum HOM05D005205 ORTHO05D006155 1.2e-104 384.0 253 76.7
Glyma.09G286000 Glycine max HOM05D005205 ORTHO05D006155 2.0e-104 383.3 257 73.9
CsaV3_5G029150 Cucumis sativus L. HOM05D005205 ORTHO05D006155 3.5e-104 382.5 256 74.6
Glyma.20G000300 Glycine max HOM05D005205 ORTHO05D006155 7.7e-104 381.3 259 71.8
Sed0014845 Sechium edule HOM05D005205 ORTHO05D006155 7.7e-104 381.3 257 74.3
MELO3C011767.2 Cucumis melo HOM05D005205 ORTHO05D006155 1.0e-103 380.9 257 73.5
Sc06g0007780 Simmondsia chinensis HOM05D005205 ORTHO05D006155 1.0e-103 380.9 256 75.4
Aqoxy3G04336 Aquilegia oxysepala HOM05D005205 ORTHO05D006155 1.7e-103 380.2 256 74.6
Sabra10G0198100 Salix brachista HOM05D005205 ORTHO05D006155 5.0e-103 378.6 263 75.3
Sed0020094 Sechium edule HOM05D005205 ORTHO05D006155 5.0e-103 378.6 258 73.6
Phvul.003G000300 Phaseolus vulgaris HOM05D005205 ORTHO05D006155 6.5e-103 378.3 257 73.5
arahy.Tifrunner.gnm1.ann1.LXEK1C Arachis hypogaea HOM05D005205 ORTHO05D006155 1.1e-102 377.5 261 74.3
arahy.Tifrunner.gnm1.ann1.JXP1KB Arachis hypogaea HOM05D005205 ORTHO05D006155 2.5e-102 376.3 261 73.9
Lj2g0013395 Lotus japonicus HOM05D005205 ORTHO05D006155 4.2e-102 375.6 259 72.6
Ca_12345_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 7.2e-102 374.8 258 73.6
CANSAT78G1147 Cannabis sativa HOM05D005205 ORTHO05D006155 1.2e-101 374.0 259 73.7
VMungo0251G0539 Vigna mungo HOM05D001906 ORTHO05D002083 1.2e-101 374.0 257 73.2
Lalb_Chr04g0259081 Lupinus albus HOM05D005205 ORTHO05D006155 1.6e-101 373.6 259 72.2
Cfa018669 Carpinus fangiana HOM05D001610 ORTHO05D001585 2.1e-101 373.2 251 76.9
unitig_27.g25294 Utricularia gibba HOM05D005205 ORTHO05D006155 2.1e-101 373.2 344 63.7
ECA246G5176 Erigeron canadensis HOM05D005205 ORTHO05D006155 1.8e-100 370.2 258 72.1
Haze_17397 Corylus avellana HOM05D005205 ORTHO05D006155 2.3e-100 369.8 287 69.7
ATR0124G008 Amborella trichopoda HOM05D005205 ORTHO05D006155 9.8e-99 364.4 257 69.3
Ah.01g011460 Amaranthus hybridus HOM05D005205 ORTHO05D006155 1.3e-98 364.0 256 71.1
HanXRQChr04g0099271 Helianthus annuus HOM05D005205 ORTHO05D006155 6.3e-98 361.7 261 71.3
Os04g0527800 Oryza sativa ssp. japonica HOM05D005205 ORTHO05D006155 1.1e-97 360.9 254 68.1
Lalb_Chr10g0094691 Lupinus albus HOM05D005205 ORTHO05D006155 7.0e-97 358.2 258 69.4
Aa31LG3G17990 Aethionema arabicum HOM05D005205 ORTHO05D006155 1.2e-96 357.5 257 71.2
HanXRQChr06g0171581 Helianthus annuus HOM05D005205 ORTHO05D006155 1.6e-96 357.1 250 72.4
Cpa.g.sc221.15 Carica papaya HOM05D005205 ORTHO05D006155 2.7e-96 356.3 258 72.1
AUR62017757 Chenopodium quinoa HOM05D005205 ORTHO05D006155 3.5e-96 355.9 259 69.1
HPP92_007317 Vanilla planifolia HOM05D005205 ORTHO05D006155 4.5e-96 355.5 256 69.9
Thhalv10013959m.g Eutrema salsugineum HOM05D005205 ORTHO05D006155 1.0e-95 354.4 259 69.1
BcaB08g37247 Brassica carinata HOM05D005205 ORTHO05D006155 2.3e-95 353.2 259 68.0
C09p68390 Brassica napus HOM05D005205 ORTHO05D006155 2.9e-95 352.8 259 68.0
BolC9t59586H Brassica oleracea HOM05D005205 ORTHO05D006155 2.9e-95 352.8 259 68.0
A10p28180 Brassica napus HOM05D005205 ORTHO05D006155 5.0e-95 352.1 259 68.0
BraA10t44867Z Brassica rapa HOM05D005205 ORTHO05D006155 5.0e-95 352.1 259 68.0
AUR62032894 Chenopodium quinoa HOM05D005205 ORTHO05D006155 6.6e-95 351.7 259 68.3
AT5G08540 Arabidopsis thaliana HOM05D005205 ORTHO05D006155 8.6e-95 351.3 257 69.3
Sp6g34350 Schrenkiella parvula HOM05D005205 ORTHO05D006155 1.5e-94 350.5 259 69.1
AL6G19250 Arabidopsis lyrata HOM05D005205 ORTHO05D006155 5.5e-94 348.6 257 69.3
Carub.0006s0750 Capsella rubella HOM05D005205 ORTHO05D006155 7.2e-94 348.2 251 70.1
CARHR204440 Cardamine hirsuta HOM05D005205 ORTHO05D006155 1.0e-92 344.4 259 68.0
EL10Ac9g23020 Beta vulgaris HOM05D005205 ORTHO05D006155 1.4e-92 344.0 259 67.2
C03p04410 Brassica napus HOM05D005205 ORTHO05D006155 3.6e-85 319.3 259 61.8
BcaB01g05587 Brassica carinata HOM05D005205 ORTHO05D006155 8.0e-85 318.2 253 63.2
BolC3t12972H Brassica oleracea HOM05D005205 ORTHO05D006155 1.8e-84 317.0 259 61.0
BraA03t09738Z Brassica rapa HOM05D005205 ORTHO05D006155 4.0e-84 315.8 258 61.6
A03p03920 Brassica napus HOM05D005205 ORTHO05D006155 1.5e-83 313.9 258 60.9
Peaxi162Scf00655g00330 Petunia axillaris HOM05D005205 ORTHO05D006155 2.4e-81 306.6 256 64.5
Medtr1g039490 Medicago truncatula HOM05D005205 ORTHO05D006155 3.6e-77 292.7 208 71.2
Lsat_1_v5_gn_3_35240 Lactuca sativa HOM05D005205 ORTHO05D006155 8.0e-77 291.6 205 70.7
Zm00001eb076700 Zea mays HOM05D005205 ORTHO05D006155 8.0e-77 291.6 257 58.4
RcHm_v2.0_Chr6g0263291 Rosa chinensis HOM05D005205 ORTHO05D006155 7.3e-70 268.5 260 56.9
Mapoly0169s0014 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.2e-69 267.7 259 51.4
Pp3c3_33330 Physcomitrium patens HOM05D005205 ORTHO05D006155 2.8e-69 266.5 261 52.5
SMO367G0125 Selaginella moellendorffii HOM05D005205 ORTHO05D006155 8.9e-68 261.5 255 48.6
RcHm_v2.0_Chr1g0316621 Rosa chinensis HOM05D005205 ORTHO05D006155 1.1e-60 238.0 172 70.9
CDE05G2447 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 2.3e-55 220.3 139 76.3
FAN28G1115 Fragaria x ananassa HOM05D005205 ORTHO05D006155 3.9e-55 219.5 173 67.1
CBR_g39443 Chara braunii HOM05D005205 ORTHO05D006155 2.5e-54 216.9 249 46.2
AagrBONN_evm.TU.Sc2ySwM_228.2354 Anthoceros agrestis HOM05D005205 ORTHO05D006155 3.6e-53 213.0 202 53.0
FAN03G0776 Fragaria x ananassa HOM05D005205 ORTHO05D006155 5.3e-52 209.1 190 60.5
Rhsim04G0130700 Rhododendron simsii HOM05D005205 ORTHO05D006155 6.0e-48 195.7 179 58.7
vmacro08834 Vaccinium macrocarpon HOM05D005205 ORTHO05D006155 3.0e-47 193.4 149 66.4
Nn1g04118 Nelumbo nucifera HOM05D005205 ORTHO05D006155 4.5e-43 179.5 122 72.1
Hma1.2p1_3386F.1_g335770 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 1.4e-41 174.5 184 55.4
TPR.G30235 Trifolium pratense HOM05D005205 ORTHO05D006155 1.2e-40 171.4 172 54.7
RcHm_v2.0_Chr4g0403031 Rosa chinensis HOM05D005205 ORTHO05D006155 8.1e-37 158.7 174 54.6
Ca_12346_v3 Cicer arietinum L. HOM05D005205 ORTHO05D006155 5.8e-35 152.5 116 66.4
Psat0s5832g0080 Pisum sativum HOM05D005205 ORTHO05D006155 6.4e-34 149.1 116 64.7
BcaB01g05586 Brassica carinata HOM05D005205 ORTHO05D006155 2.5e-33 147.1 104 68.3
Hma1.2p1_3386F.1_g335780 Hydrangea macrophylla HOM05D005205 ORTHO05D006155 5.5e-33 146.0 98 76.5
FAN14G4394 Fragaria x ananassa HOM05D005205 ORTHO05D006155 4.3e-30 136.3 113 61.9
HanXRQChr01g0001451 Helianthus annuus HOM05D005205 ORTHO05D006155 1.6e-29 134.4 94 71.3
Nn7g36511 Nelumbo nucifera HOM05D005205 ORTHO05D006155 9.0e-28 128.6 74 85.1
SEGI_15080 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 1.5e-27 127.9 112 56.2
CDE05G2109 Ceratophyllum demersum HOM05D005205 ORTHO05D006155 2.0e-27 127.5 75 74.7
Cc00_g03890 Coffea canephora HOM05D005205 ORTHO05D006155 3.2e-25 120.2 82 74.4
PRCOL_00005587 Prasinoderma coloniale HOM05D005205 ORTHO05D006155 1.0e-23 115.2 208 32.2
RcHm_v2.0_Chr3g0483731 Rosa chinensis HOM05D005205 ORTHO05D006155 1.3e-23 114.8 80 72.5
RcHm_v2.0_Chr3g0483721 Rosa chinensis HOM05D005205 ORTHO05D006155 3.0e-23 113.6 70 74.3
SEGI_28687 Sequoiadendron giganteum HOM05D005205 ORTHO05D006155 5.3e-20 102.8 86 62.8
SHI21163 Sapria himalayana HOM05D005205 ORTHO05D006155 1.2e-19 101.7 73 61.6
Nn5g29101 Nelumbo nucifera HOM05D005205 ORTHO05D006155 1.2e-16 91.7 56 80.4
FAN01G2591 Fragaria x ananassa HOM05D005205 ORTHO05D006155 4.6e-16 89.7 91 54.9
TPR.G15012 Trifolium pratense HOM05D005205 ORTHO05D006155 7.9e-16 89.0 56 76.8
Mapoly0067s0102 Marchantia polymorpha HOM05D005205 ORTHO05D006155 1.0e-15 88.6 147 36.7
TPR.G39699 Trifolium pratense HOM05D005205 ORTHO05D006155 1.4e-15 88.2 50 82.0
Mapoly0067s0101 Marchantia polymorpha HOM05D005205 ORTHO05D006155 3.0e-15 87.0 149 32.2
SHI21160 Sapria himalayana HOM05D005205 ORTHO05D006155 3.0e-15 87.0 99 52.5
Cre09.g402950 Chlamydomonas reinhardtii HOM05D005205 ORTHO05D006155 5.7e-14 82.8 246 27.6
Mapoly0067s0100 Marchantia polymorpha HOM05D005205 ORTHO05D006155 7.4e-14 82.4 147 34.0
MBI16_g05633_MAGBIO Magnolia biondii HOM05D000869 ORTHO05D000685 1.0e-10 72.0 60 48.3
Sabra08G0000800 Salix brachista HOM05D005205 ORTHO05D006155 5.0e-10 69.7 62 58.1
Psat5g249280 Pisum sativum HOM05D005205 ORTHO05D006155 3.2e-09 67.0 36 88.9
SHI21161 Sapria himalayana HOM05D005205 ORTHO05D006155 1.0e-07 62.0 39 66.7
SalBow1G0093 Salvia bowleyana HOM05D005205 ORTHO05D006155 1.1e-06 58.5 53 60.4
Cc00_g03900 Coffea canephora HOM05D005205 ORTHO05D006155 7.4e-06 55.8 56 53.6


User provided reference genes

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