Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 7.2e-121 437.2 209 100.0
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 1.7e-109 399.4 209 89.5
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 6.3e-109 397.5 209 89.0
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.8e-108 396.0 209 90.0
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 4.1e-108 394.8 209 90.0
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 5.3e-108 394.4 209 89.0
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 7.0e-108 394.0 209 89.5
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 2.6e-107 392.1 209 89.0
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 5.9e-107 391.0 209 88.5
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 1.0e-106 390.2 209 88.5
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 2.9e-106 388.7 209 87.6
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 6.5e-106 387.5 209 87.6
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 8.5e-106 387.1 209 87.6
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 8.5e-106 387.1 209 87.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.9e-105 386.0 209 87.1
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.5e-105 385.6 209 86.6
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 87.6
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 87.1
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 4.2e-105 384.8 209 87.1
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 5.5e-105 384.4 243 79.4
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 7.2e-105 384.0 209 87.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 86.1
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 85.6
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 1.6e-104 382.9 209 85.6
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 87.1
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 86.1
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 2.1e-104 382.5 209 87.1
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 4.7e-104 381.3 209 86.1
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 8.0e-104 380.6 209 86.6
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 8.0e-104 380.6 209 86.6
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.8e-103 379.4 209 84.7
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 85.6
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 3.9e-103 378.3 209 86.1
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 3.9e-103 378.3 225 81.8
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 86.1
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 6.7e-103 377.5 209 85.6
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.1e-102 376.7 207 85.5
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 85.2
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 84.7
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 85.6
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 87.6
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 85.6
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 85.6
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 84.2
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 2.6e-102 375.6 207 86.0
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 84.7
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 84.7
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 86.1
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 84.2
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 84.2
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 83.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 82.8
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 84.2
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 83.3
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 84.7
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 1.3e-101 373.2 207 85.5
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 82.3
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 3.7e-101 371.7 207 85.5
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 3.7e-101 371.7 209 84.7
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 84.2
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 8.2e-101 370.5 208 85.1
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 83.7
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 83.7
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.1e-100 370.2 208 83.7
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 81.3
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 82.3
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.1e-100 370.2 208 82.7
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 82.8
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 83.3
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 83.3
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 83.3
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 4.1e-100 368.2 209 83.3
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 84.7
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 2.6e-99 365.5 209 80.4
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.6e-99 365.5 221 81.0
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 5.9e-99 364.4 209 81.8
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 81.8
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 7.7e-99 364.0 209 81.8
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 82.3
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 1.7e-98 362.8 209 82.3
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.9e-97 359.4 230 77.8
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 3.2e-97 358.6 187 90.9
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.2e-97 357.5 230 77.4
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 4.7e-96 354.8 209 79.9
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 4.7e-96 354.8 240 74.6
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.2e-94 350.1 209 80.9
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.2e-94 350.1 209 79.9
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 2.0e-94 349.4 187 89.3
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.0e-94 349.4 190 86.8
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 2.2e-93 345.9 209 77.5
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.4e-92 342.4 187 85.0
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 4.1e-92 341.7 191 85.9
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 1.3e-90 336.7 190 82.1
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 1.7e-90 336.3 288 61.8
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 1.7e-90 336.3 206 74.8
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 6.5e-90 334.3 189 82.5
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.1e-89 333.6 193 81.9
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 4.2e-89 331.6 209 76.6
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 5.5e-89 331.3 185 84.3
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 6.1e-88 327.8 209 71.8
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 1.0e-87 327.0 208 70.2
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 4.8e-85 318.2 208 71.2
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 3.3e-81 305.4 165 85.5
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 7.2e-81 304.3 209 73.7
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 3.0e-79 298.9 205 66.3
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 6.3e-77 291.2 197 72.1
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 3.1e-76 288.9 151 90.1
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 9.2e-76 287.3 165 82.4
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.3e-66 256.9 179 67.6
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 2.3e-66 256.1 209 64.6
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 3.0e-66 255.8 204 61.3
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 9.5e-65 250.8 208 58.2
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 2.0e-62 243.0 210 55.2
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 5.8e-62 241.5 167 67.1
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.2e-60 235.7 135 81.5
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 7.5e-54 214.5 206 52.4
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.1e-49 200.7 152 64.5
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 3.1e-47 192.6 206 47.1
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.1e-39 167.5 207 38.2
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 6.9e-39 164.9 149 59.1
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.2e-37 159.8 84 91.7
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 3.8e-37 159.1 135 53.3
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 5.4e-36 155.2 126 62.7
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 5.1e-34 148.7 84 84.5
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.1e-32 143.3 135 50.4
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.7e-29 133.7 226 35.4
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 6.0e-27 125.2 74 77.0
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.4e-20 104.0 83 66.3
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.1e-16 90.1 43 93.0


User provided reference genes

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