Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005515.1 Olea europaea HOM05D004295 ORTHO05D004901 1.3e-63 246.1 119 100.0
Oeu005986.1 Olea europaea HOM05D004295 ORTHO05D004901 1.9e-25 119.4 122 58.2
Migut.M01703 Erythranthe guttata HOM05D004295 ORTHO05D004901 5.0e-18 94.7 86 58.1
MSTRG.6962 Avicennia marina HOM05D004295 ORTHO05D004901 7.2e-17 90.9 83 56.6
Peaxi162Scf00339g01131 Petunia axillaris HOM05D004295 ORTHO05D004901 1.2e-16 90.1 106 50.9
Oeu007994.1 Olea europaea HOM05D004295 ORTHO05D004901 1.6e-16 89.7 107 55.1
SGA_v2.0_scaffold168G38508 Striga asiatica HOM05D004295 ORTHO05D004901 2.1e-16 89.4 86 54.7
Sopen12g007410 Solanum pennellii HOM05D004295 ORTHO05D004901 1.0e-15 87.0 103 49.5
CSS0006554 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 3.0e-15 85.5 79 55.7
Nitab4.5_0002338g0050 Nicotiana tabacum HOM05D004295 ORTHO05D004901 3.0e-15 85.5 103 48.5
Dinv22227 Davidia involucrata HOM05D004295 ORTHO05D004901 5.1e-15 84.7 72 59.7
Solyc12g014540.2 Solanum lycopersicum HOM05D004295 ORTHO05D004901 6.7e-15 84.3 103 48.5
Nitab4.5_0003989g0010 Nicotiana tabacum HOM05D004295 ORTHO05D004901 1.1e-14 83.6 103 46.6
Nitab4.5_0005221g0010 Nicotiana tabacum HOM05D004295 ORTHO05D004901 4.3e-14 81.6 100 45.0
PGSC0003DMG400012847 Solanum tuberosum HOM05D004295 ORTHO05D004901 5.7e-14 81.3 103 47.6
Dinv40798 Davidia involucrata HOM05D004295 ORTHO05D004901 7.4e-14 80.9 72 56.9
Hma1.2p1_0036F.1_g023080 Hydrangea macrophylla HOM05D004295 ORTHO05D004901 9.7e-14 80.5 89 47.2
vmacro09687 Vaccinium macrocarpon HOM05D004295 ORTHO05D004901 6.3e-13 77.8 69 53.6
Actinidia10753 Actinidia chinensis HOM05D004295 ORTHO05D004901 1.4e-12 76.6 68 54.4
CSS0023200 Camellia sinensis var. sinensis HOM05D004295 ORTHO05D004901 1.8e-12 76.3 96 46.9
unitig_62.g23290 Utricularia gibba HOM05D004295 ORTHO05D004901 1.8e-12 76.3 91 46.2
Nitab4.5_0001160g0060 Nicotiana tabacum HOM05D004295 ORTHO05D004901 4.1e-12 75.1 75 52.0
Rhsim04G0016300 Rhododendron simsii HOM05D004295 ORTHO05D004901 4.1e-12 75.1 92 44.6
Lsat_1_v5_gn_5_2601 Lactuca sativa HOM05D004295 ORTHO05D004901 6.9e-12 74.3 62 59.7
Actinidia37372 Actinidia chinensis HOM05D004295 ORTHO05D004901 1.2e-11 73.6 74 52.7
Solyc07g065000.3 Solanum lycopersicum HOM05D004295 ORTHO05D004901 1.5e-11 73.2 98 45.9
DCAR_022592 Daucus carota HOM05D004295 ORTHO05D004901 2.0e-11 72.8 90 45.6
PGSC0003DMG402022202 Solanum tuberosum HOM05D004295 ORTHO05D004901 2.0e-11 72.8 99 44.4
Cc05_g14350 Coffea canephora HOM05D004295 ORTHO05D004901 4.5e-11 71.6 64 51.6
Sopen07g033210 Solanum pennellii HOM05D004295 ORTHO05D004901 5.9e-11 71.2 59 57.6
HanXRQChr13g0408281 Helianthus annuus HOM05D004295 ORTHO05D004901 7.7e-11 70.9 61 57.4
Lj8A173T74 Lonicera japonica HOM05D004295 ORTHO05D004901 2.2e-10 69.3 72 47.2
CAN.G337.52 Capsicum annuum HOM05D004295 ORTHO05D004901 5.0e-10 68.2 60 53.3
DCAR_013201 Daucus carota HOM05D004295 ORTHO05D004901 6.5e-10 67.8 59 52.5
Lj1A881T81 Lonicera japonica HOM05D004295 ORTHO05D004901 6.5e-10 67.8 80 43.8
HanXRQChr05g0159731 Helianthus annuus HOM05D004295 ORTHO05D004901 8.5e-10 67.4 60 53.3
Hma1.2p1_1332F.1_g276160 Hydrangea macrophylla HOM05D004295 ORTHO05D004901 1.1e-09 67.0 79 48.1
CDE06G2452 Ceratophyllum demersum HOM05D004295 ORTHO05D004901 1.9e-09 66.2 98 36.7
CAN.G791.3 Capsicum annuum HOM05D004295 ORTHO05D004901 2.5e-09 65.9 58 53.4
ECA246G1209 Erigeron canadensis HOM05D004295 ORTHO05D004901 3.2e-09 65.5 58 53.4
Nn7g37915 Nelumbo nucifera HOM05D004295 ORTHO05D004901 9.4e-09 63.9 98 40.8
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.2e-08 63.5 96 40.6
TAR629G3495 Trochodendron aralioides HOM05D004295 ORTHO05D004901 1.2e-08 63.5 86 41.9
Cpa.g.sc12.238 Carica papaya HOM05D004295 ORTHO05D004901 1.6e-08 63.2 76 46.1
CDE04G3193 Ceratophyllum demersum HOM05D004295 ORTHO05D004901 1.6e-08 63.2 91 41.8
ECA240G3846 Erigeron canadensis HOM05D004295 ORTHO05D004901 1.6e-08 63.2 82 42.7
PSO302G0213 Papaver somniferum HOM05D004295 ORTHO05D004901 6.1e-08 61.2 57 45.6
Ah.06g182200 Amaranthus hybridus HOM05D004295 ORTHO05D004901 7.9e-08 60.8 57 50.9
Peaxi162Scf00235g00827 Petunia axillaris HOM05D004295 ORTHO05D004901 1.0e-07 60.5 57 47.4
EL10Ac4g07685 Beta vulgaris HOM05D004295 ORTHO05D004901 1.4e-07 60.1 56 48.2
PSO302G0053 Papaver somniferum HOM05D004295 ORTHO05D004901 1.4e-07 60.1 57 43.9
PSO210G3166 Papaver somniferum HOM05D004295 ORTHO05D004901 1.8e-07 59.7 57 43.9
CANSAT11G1231 Cannabis sativa HOM05D004295 ORTHO05D004901 2.3e-07 59.3 109 34.9
AT1G50620 Arabidopsis thaliana HOM05D004295 ORTHO05D004901 3.9e-07 58.5 99 35.4
CARHR095900 Cardamine hirsuta HOM05D004295 ORTHO05D004901 5.1e-07 58.2 84 35.7
AUR62015886 Chenopodium quinoa HOM05D004295 ORTHO05D004901 5.1e-07 58.2 57 45.6
AUR62020337 Chenopodium quinoa HOM05D004295 ORTHO05D004901 5.1e-07 58.2 57 45.6
MBI16_g42268_MAGBIO Magnolia biondii HOM05D004295 ORTHO05D004901 5.1e-07 58.2 67 46.3
PSO210G5678 Papaver somniferum HOM05D004295 ORTHO05D004901 5.1e-07 58.2 57 43.9
PGR031G2569 Punica granatum HOM05D004295 ORTHO05D004901 6.7e-07 57.8 59 47.5
Hund01951 Selenicereus undatus HOM05D004295 ORTHO05D004901 6.7e-07 57.8 57 43.9
Sc16g0005710 Simmondsia chinensis HOM05D004295 ORTHO05D004901 1.1e-06 57.0 58 44.8
GSVIVG01037732001 Vitis vinifera HOM05D004295 ORTHO05D004901 1.5e-06 56.6 60 43.3
LjContig00272g0028044 Lotus japonicus HOM05D004295 ORTHO05D004901 2.0e-06 56.2 84 36.9
Nn1g03330 Nelumbo nucifera HOM05D004295 ORTHO05D004901 2.0e-06 56.2 88 35.2
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 3.3e-06 55.5 88 36.4
AL1G58280 Arabidopsis lyrata HOM05D004295 ORTHO05D004901 3.3e-06 55.5 87 37.9
Manes.15G066000 Manihot esculenta HOM05D004295 ORTHO05D004901 3.3e-06 55.5 60 40.0
Sp1g37440 Schrenkiella parvula HOM05D004295 ORTHO05D004901 3.3e-06 55.5 59 42.4
Gohir.A08G024300 Gossypium hirsutum HOM05D004295 ORTHO05D004901 4.4e-06 55.1 59 45.8
Gohir.D08G034800 Gossypium hirsutum HOM05D004295 ORTHO05D004901 4.4e-06 55.1 59 45.8
Gorai.004G032700 Gossypium raimondii HOM05D004295 ORTHO05D004901 4.4e-06 55.1 59 45.8
Carub.0001s3966 Capsella rubella HOM05D004295 ORTHO05D004901 5.7e-06 54.7 57 45.6
Lalb_Chr10g0107181 Lupinus albus HOM05D004295 ORTHO05D004901 5.7e-06 54.7 91 37.4
QL08p007634 Quercus lobata HOM05D004295 ORTHO05D004901 5.7e-06 54.7 81 38.3
THA.LOC104810240 Tarenaya hassleriana HOM05D004295 ORTHO05D004901 5.7e-06 54.7 57 45.6
Aqoxy1G04109 Aquilegia oxysepala HOM05D004295 ORTHO05D004901 7.4e-06 54.3 58 43.1
Potri.001G358900 Populus trichocarpa HOM05D004295 ORTHO05D004901 7.4e-06 54.3 76 35.5
Aa31LG8G7090 Aethionema arabicum HOM05D004295 ORTHO05D004901 9.7e-06 53.9 55 41.8
C05p33520 Brassica napus HOM05D004295 ORTHO05D004901 9.7e-06 53.9 98 31.6
Eucgr.F03507 Eucalyptus grandis HOM05D004295 ORTHO05D004901 9.7e-06 53.9 71 45.1
TAR626G0993 Trochodendron aralioides HOM05D004295 ORTHO05D004901 9.7e-06 53.9 55 43.6


User provided reference genes

Program Settings