Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005320.1 Olea europaea HOM05D001533 ORTHO05D005122 3.3e-145 518.5 281 100.0
Rhsim08G0034200 Rhododendron simsii HOM05D001533 ORTHO05D005122 1.6e-104 383.3 319 68.7
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 1.6e-104 383.3 319 68.7
RcHm_v2.0_Chr2g0099581 Rosa chinensis HOM05D001533 ORTHO05D005122 2.8e-104 382.5 300 72.0
Peaxi162Scf00083g00714 Petunia axillaris HOM05D001533 ORTHO05D005122 8.2e-104 380.9 319 68.7
QL06p033501 Quercus lobata HOM05D001533 ORTHO05D005122 1.1e-103 380.6 318 68.6
Actinidia31002 Actinidia chinensis HOM05D001533 ORTHO05D005122 1.4e-103 380.2 319 68.0
Ciclev10025997m.g Citrus clementina HOM05D001533 ORTHO05D005122 1.8e-103 379.8 319 69.3
Manes.01G145100 Manihot esculenta HOM05D001533 ORTHO05D005122 3.1e-103 379.0 319 68.7
CAN.G1671.6 Capsicum annuum HOM05D001533 ORTHO05D005122 4.1e-103 378.6 319 67.4
Nitab4.5_0006286g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 9.1e-103 377.5 319 68.0
Cc00_g26600 Coffea canephora HOM05D001533 ORTHO05D005122 1.5e-102 376.7 319 69.0
Cpa.g.sc6.238 Carica papaya HOM05D001533 ORTHO05D005122 5.9e-102 374.8 319 67.7
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 7.7e-102 374.4 309 69.3
MD02G1133400 Malus domestica HOM05D001533 ORTHO05D005122 7.7e-102 374.4 319 67.1
Solyc02g083990.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 7.7e-102 374.4 319 66.1
CSS0008566 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 1.3e-101 373.6 319 69.0
Prupe.7G167200 Prunus persica HOM05D001533 ORTHO05D005122 1.3e-101 373.6 319 66.8
FvH4_1g11960 Fragaria vesca HOM05D001533 ORTHO05D005122 2.9e-101 372.5 319 67.4
FAN19G0503 Fragaria x ananassa HOM05D001533 ORTHO05D005122 2.9e-101 372.5 319 67.4
Oeu048459.1 Olea europaea HOM05D001533 ORTHO05D005122 2.9e-101 372.5 231 86.6
FAN28G1062 Fragaria x ananassa HOM05D001533 ORTHO05D005122 8.5e-101 370.9 319 67.1
FAN23G2041 Fragaria x ananassa HOM05D001533 ORTHO05D005122 1.4e-100 370.2 319 67.1
Haze_03774 Corylus avellana HOM05D001533 ORTHO05D005122 1.9e-100 369.8 309 68.6
Nitab4.5_0000438g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.9e-100 369.8 315 67.0
Potri.005G115500 Populus trichocarpa HOM05D001533 ORTHO05D005122 1.9e-100 369.8 318 67.0
COL.COLO4_21923 Corchorus olitorius HOM05D001533 ORTHO05D005122 2.5e-100 369.4 320 68.1
FAN26G0519 Fragaria x ananassa HOM05D001533 ORTHO05D005122 2.5e-100 369.4 319 66.8
Sopen02g028790 Solanum pennellii HOM05D001533 ORTHO05D005122 2.5e-100 369.4 319 65.2
Thecc.01G020200 Theobroma cacao HOM05D001533 ORTHO05D005122 4.2e-100 368.6 319 68.0
TWI53G2031 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 5.5e-100 368.2 319 66.8
CiPaw.07G057700 Carya illinoinensis HOM05D001533 ORTHO05D005122 1.6e-99 366.7 311 67.2
MELO3C016393.2 Cucumis melo HOM05D001533 ORTHO05D005122 2.1e-99 366.3 319 66.5
Nn6g32353 Nelumbo nucifera HOM05D001533 ORTHO05D005122 3.6e-99 365.5 316 67.1
Potri.007G012600 Populus trichocarpa HOM05D001533 ORTHO05D005122 1.4e-98 363.6 317 65.3
CiPaw.08G132200 Carya illinoinensis HOM05D001533 ORTHO05D005122 1.8e-98 363.2 319 64.6
CsaV3_4G005560 Cucumis sativus L. HOM05D001533 ORTHO05D005122 1.8e-98 363.2 319 66.1
Lj4g0002557 Lotus japonicus HOM05D001533 ORTHO05D005122 2.3e-98 362.8 315 64.8
TWI09G0584 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 2.3e-98 362.8 319 65.5
Sabra05G0094600 Salix brachista HOM05D001533 ORTHO05D005122 3.0e-98 362.5 347 62.2
TAR381G0830 Trochodendron aralioides HOM05D001533 ORTHO05D005122 8.8e-98 360.9 319 64.3
CAN.G893.6 Capsicum annuum HOM05D001533 ORTHO05D005122 3.3e-97 359.0 319 64.6
Glyma.01G166700 Glycine max HOM05D001533 ORTHO05D005122 3.3e-97 359.0 317 64.4
ClCG07G008590 Citrullus lanatus HOM05D001533 ORTHO05D005122 5.7e-97 358.2 309 66.7
VMungo1215G1138 Vigna mungo HOM05D001533 ORTHO05D005122 7.4e-97 357.8 292 67.5
Duzib187G1725 Durio zibethinus HOM05D001533 ORTHO05D005122 1.3e-96 357.1 319 65.5
Phvul.002G109200 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 2.8e-96 355.9 317 64.0
Sed0027203 Sechium edule HOM05D001533 ORTHO05D005122 3.7e-96 355.5 311 65.9
PSO170G0469 Papaver somniferum HOM05D001533 ORTHO05D005122 1.4e-95 353.6 316 63.9
Glyma.02G049100 Glycine max HOM05D001533 ORTHO05D005122 5.3e-95 351.7 319 63.6
Solyc03g033580.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 1.2e-94 350.5 319 63.6
PSO700G0386 Papaver somniferum HOM05D001533 ORTHO05D005122 4.5e-94 348.6 316 63.3
Sopen03g006360 Solanum pennellii HOM05D001533 ORTHO05D005122 1.0e-93 347.4 294 66.7
MSTRG.2705 Avicennia marina HOM05D001533 ORTHO05D005122 8.5e-93 344.4 319 63.9
Ca_22369_v3 Cicer arietinum L. HOM05D001533 ORTHO05D005122 9.4e-92 340.9 315 62.2
VMungo0251G1454 Vigna mungo HOM05D001533 ORTHO05D005122 4.7e-91 338.6 294 64.3
CSS0030027 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 7.9e-91 337.8 319 63.6
Lj2g0008453 Lotus japonicus HOM05D001533 ORTHO05D005122 1.0e-90 337.4 292 64.4
Lalb_Chr09g0321781 Lupinus albus HOM05D001533 ORTHO05D005122 1.8e-90 336.7 280 66.8
Dinv33621 Davidia involucrata HOM05D001533 ORTHO05D005122 2.3e-90 336.3 294 65.6
TPR.G30063 Trifolium pratense HOM05D001533 ORTHO05D005122 3.0e-90 335.9 300 63.3
SGA_v2.0_scaffold137G35090 Striga asiatica HOM05D001533 ORTHO05D005122 3.9e-90 335.5 294 65.3
CANSAT80G2154 Cannabis sativa HOM05D001533 ORTHO05D005122 7.4e-89 331.3 294 63.9
Phvul.003G262700 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 2.2e-88 329.7 294 62.6
Glyma.11G076600 Glycine max HOM05D001533 ORTHO05D005122 1.1e-87 327.4 317 61.2
Peaxi162Scf00034g00264 Petunia axillaris HOM05D001533 ORTHO05D005122 1.4e-87 327.0 319 60.5
Sp3g31420 Schrenkiella parvula HOM05D001533 ORTHO05D005122 9.1e-87 324.3 287 61.3
Glyma.16G129200 Glycine max HOM05D001533 ORTHO05D005122 1.2e-86 323.9 319 59.6
Gorai.003G010300 Gossypium raimondii HOM05D001533 ORTHO05D005122 5.9e-86 321.6 294 64.6
Lj2C466T13 Lonicera japonica HOM05D001533 ORTHO05D005122 7.7e-86 321.2 284 65.5
Gohir.A02G170000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 3.8e-85 318.9 294 64.3
Os06g0715400 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D005122 3.8e-85 318.9 293 60.8
Eucgr.J02426 Eucalyptus grandis HOM05D001533 ORTHO05D005122 7.2e-84 314.7 297 63.3
THA.LOC104804260 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 1.2e-83 313.9 295 60.0
SalBow3G3323 Salvia bowleyana HOM05D001533 ORTHO05D005122 6.1e-83 311.6 368 55.2
Aa31LG1G14750 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.8e-82 310.1 295 61.0
AT2G17990 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 1.8e-82 310.1 313 55.3
Zm00001eb228040 Zea mays HOM05D001533 ORTHO05D005122 6.7e-82 308.1 292 61.0
CARHR108480 Cardamine hirsuta HOM05D001533 ORTHO05D005122 8.8e-82 307.8 277 60.6
AL3G51060 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 2.0e-81 306.6 286 58.7
Nitab4.5_0006119g0010 Nicotiana tabacum HOM05D001533 ORTHO05D005122 4.4e-81 305.4 315 58.7
THA.LOC104807492 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 5.7e-81 305.1 294 58.2
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea HOM05D001533 ORTHO05D005122 1.3e-80 303.9 314 58.3
DCAR_016613 Daucus carota HOM05D001533 ORTHO05D005122 8.2e-80 301.2 285 61.1
Oeu035307.1 Olea europaea HOM05D001533 ORTHO05D005122 8.2e-80 301.2 319 58.6
GSVIVG01018794001 Vitis vinifera HOM05D001533 ORTHO05D005122 8.2e-80 301.2 294 62.2
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 1.1e-79 300.8 263 64.6
Carub.0003s3213 Capsella rubella HOM05D001533 ORTHO05D005122 1.4e-79 300.4 284 58.5
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 1.8e-79 300.1 319 57.1
Lj4C217T16 Lonicera japonica HOM05D001533 ORTHO05D005122 5.3e-79 298.5 321 57.0
Manes.02G103600 Manihot esculenta HOM05D001533 ORTHO05D005122 7.0e-79 298.1 319 56.7
Gohir.D03G010000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.2e-78 297.4 294 61.2
Thhalv10004494m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 5.9e-78 295.0 280 60.7
Thhalv10022777m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 5.9e-78 295.0 276 60.5
Gohir.A11G176200 Gossypium hirsutum HOM05D001533 ORTHO05D005122 5.9e-78 295.0 318 57.5
BcaB08g34783 Brassica carinata HOM05D001533 ORTHO05D005122 2.2e-77 293.1 281 58.7
Nn5g29330 Nelumbo nucifera HOM05D001533 ORTHO05D005122 2.9e-77 292.7 315 57.1
Atru.chr3.790 Acer truncatum HOM05D001533 ORTHO05D005122 8.5e-77 291.2 319 57.1
Duzib264G0112 Durio zibethinus HOM05D001533 ORTHO05D005122 8.5e-77 291.2 319 57.1
C07p04980 Brassica napus HOM05D001533 ORTHO05D005122 1.9e-76 290.0 280 58.6
A07p02680 Brassica napus HOM05D001533 ORTHO05D005122 5.5e-76 288.5 278 57.9
BraA07t28064Z Brassica rapa HOM05D001533 ORTHO05D005122 5.5e-76 288.5 278 57.9
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 5.5e-76 288.5 261 62.5
AL8G45270 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 9.4e-76 287.7 262 63.4
Aa31LG8G15170 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.6e-75 287.0 290 57.6
BcaC06g36351 Brassica carinata HOM05D001533 ORTHO05D005122 1.6e-75 287.0 280 57.9
AUR62043756 Chenopodium quinoa HOM05D001533 ORTHO05D005122 2.1e-75 286.6 319 54.9
AUR62044201 Chenopodium quinoa HOM05D001533 ORTHO05D005122 2.1e-75 286.6 319 54.9
Gorai.007G195800 Gossypium raimondii HOM05D001533 ORTHO05D005122 2.3e-74 283.1 318 56.6
EL10As8g23833 Beta vulgaris HOM05D001533 ORTHO05D005122 3.0e-74 282.7 289 56.7
CANSAT01G1879 Cannabis sativa HOM05D001533 ORTHO05D005122 2.0e-73 280.0 294 57.1
AT5G66250 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 2.6e-73 279.6 267 60.3
Gohir.D11G183900 Gossypium hirsutum HOM05D001533 ORTHO05D005122 3.4e-73 279.3 318 56.3
Sp2g30440 Schrenkiella parvula HOM05D001533 ORTHO05D005122 9.8e-73 277.7 283 58.3
AUR62007522 Chenopodium quinoa HOM05D001533 ORTHO05D005122 2.8e-72 276.2 312 53.8
Duzib147G0876 Durio zibethinus HOM05D001533 ORTHO05D005122 3.7e-72 275.8 319 55.5
Aqoxy6G02302 Aquilegia oxysepala HOM05D001533 ORTHO05D005122 8.3e-72 274.6 285 57.2
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea HOM05D001533 ORTHO05D005122 4.1e-71 272.3 262 59.2
Carub.0008s2824 Capsella rubella HOM05D001533 ORTHO05D005122 4.1e-71 272.3 261 60.5
AL6G43540 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 3.5e-70 269.2 272 57.7
A06p33470 Brassica napus HOM05D001533 ORTHO05D005122 4.5e-70 268.9 281 55.5
C09p11970 Brassica napus HOM05D001533 ORTHO05D005122 4.5e-70 268.9 257 62.3
BolC3t18147H Brassica oleracea HOM05D001533 ORTHO05D005122 4.5e-70 268.9 290 53.8
Hund16484 Selenicereus undatus HOM05D001533 ORTHO05D005122 4.5e-70 268.9 319 52.0
PGR119G1411 Punica granatum HOM05D001533 ORTHO05D005122 5.9e-70 268.5 311 53.4
TAR628G0959 Trochodendron aralioides HOM05D001533 ORTHO05D005122 7.7e-70 268.1 319 53.3
BraA06t26280Z Brassica rapa HOM05D001533 ORTHO05D005122 1.0e-69 267.7 276 54.7
ECA246G3074 Erigeron canadensis HOM05D001533 ORTHO05D005122 2.3e-69 266.5 319 53.0
Lalb_Chr05g0229891 Lupinus albus HOM05D001533 ORTHO05D005122 2.9e-69 266.2 294 54.4
Nitab4.5_0001959g0020 Nicotiana tabacum HOM05D001533 ORTHO05D005122 2.9e-69 266.2 261 59.8
Lalb_Chr16g0377521 Lupinus albus HOM05D001533 ORTHO05D005122 3.2e-68 262.7 296 53.0
BolC9t54085H Brassica oleracea HOM05D001533 ORTHO05D005122 9.5e-68 261.2 275 58.2
A09p10100 Brassica napus HOM05D001533 ORTHO05D005122 1.2e-67 260.8 256 60.2
BraA09t36653Z Brassica rapa HOM05D001533 ORTHO05D005122 4.7e-67 258.8 268 58.6
BcaNung04495 Brassica carinata HOM05D001533 ORTHO05D005122 6.1e-67 258.5 244 62.3
C03p58890 Brassica napus HOM05D001533 ORTHO05D005122 3.0e-66 256.1 280 53.6
MBI05_g43883_MAGBIO Magnolia biondii HOM05D001533 ORTHO05D005122 1.2e-62 244.2 319 50.2
Sp7g33880 Schrenkiella parvula HOM05D001533 ORTHO05D005122 2.0e-62 243.4 284 52.5
Thhalv10025665m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 2.7e-62 243.0 289 51.2
Aa31LG6G13050 Aethionema arabicum HOM05D001533 ORTHO05D005122 7.8e-62 241.5 289 49.8
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 7.5e-57 224.9 267 52.1
Lsat_1_v5_gn_4_146800 Lactuca sativa HOM05D001533 ORTHO05D005122 3.7e-56 222.6 279 49.8
CDE04G1263 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 1.8e-55 220.3 290 45.9
Lsat_1_v5_gn_4_146821 Lactuca sativa HOM05D001533 ORTHO05D005122 1.8e-55 220.3 274 50.0
CDE02G4489 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 9.2e-55 218.0 291 46.4
Carub.0007s0413 Capsella rubella HOM05D001533 ORTHO05D005122 4.6e-54 215.7 296 46.3
Psat4g098560 Pisum sativum HOM05D001533 ORTHO05D005122 4.6e-54 215.7 294 48.6
BolC7t40899H Brassica oleracea HOM05D001533 ORTHO05D005122 2.5e-52 209.9 224 52.7
Ah.02g124450 Amaranthus hybridus HOM05D001533 ORTHO05D005122 3.6e-51 206.1 209 57.9
MD15G1246600 Malus domestica HOM05D001533 ORTHO05D005122 6.2e-51 205.3 138 82.6
Sc16g0002080 Simmondsia chinensis HOM05D001533 ORTHO05D005122 2.3e-50 203.4 300 46.3
BcaNung04499 Brassica carinata HOM05D001533 ORTHO05D005122 5.8e-49 198.7 214 54.7
SMO358G0186 Selaginella moellendorffii HOM05D001533 ORTHO05D005122 9.8e-49 198.0 290 43.4
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis HOM05D001533 ORTHO05D005122 3.7e-48 196.1 311 41.8
CARHR281470 Cardamine hirsuta HOM05D001533 ORTHO05D005122 6.4e-48 195.3 213 54.9
unitig_899.g14709 Utricularia gibba HOM05D001533 ORTHO05D000063 9.5e-44 181.4 142 71.8
AT4G36105 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 3.7e-40 169.5 271 44.3
HPP92_007128 Vanilla planifolia HOM05D001533 ORTHO05D005122 8.3e-40 168.3 179 57.0
Medtr8g076020 Medicago truncatula HOM05D001533 ORTHO05D005122 1.9e-39 167.2 319 39.5
ATR0680G362 Amborella trichopoda HOM05D001533 ORTHO05D005122 4.1e-39 166.0 306 38.2
SEGI_32707 Sequoiadendron giganteum HOM05D001533 ORTHO05D005122 9.2e-39 164.9 296 37.8
AUR62043805 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.0e-37 161.4 172 57.6
C01p02930 Brassica napus HOM05D001533 ORTHO05D024397 9.9e-33 144.8 264 39.0
CARHR244500 Cardamine hirsuta HOM05D001533 ORTHO05D005122 5.4e-31 139.0 277 38.3
BolC1t00279H Brassica oleracea HOM05D001533 ORTHO05D024397 1.1e-28 131.3 272 37.9
HanXRQChr16g0531321 Helianthus annuus HOM05D001533 ORTHO05D005122 3.3e-28 129.8 165 47.3
unitig_699.g19710 Utricularia gibba HOM05D001533 ORTHO05D005122 2.4e-26 123.6 145 52.4
A01p02640 Brassica napus HOM05D001533 ORTHO05D024397 1.1e-23 114.8 260 35.0
BraA01t00250Z Brassica rapa HOM05D001533 ORTHO05D024397 1.1e-23 114.8 260 35.0
A09p11640 Brassica napus HOM05D001533 ORTHO05D019802 9.0e-18 95.1 100 58.0
BcaNung00764 Brassica carinata HOM05D001533 ORTHO05D024397 2.9e-16 90.1 272 32.7
BraA09t36810Z Brassica rapa HOM05D001533 ORTHO05D019802 5.4e-15 85.9 111 50.5
CARHR281460 Cardamine hirsuta HOM05D001533 ORTHO05D019802 5.4e-15 85.9 55 83.6
arahy.Tifrunner.gnm1.ann1.2HD0B7 Arachis hypogaea HOM05D001533 ORTHO05D019802 4.3e-12 76.3 50 80.0
BolC9t54258H Brassica oleracea HOM05D001533 ORTHO05D019802 4.9e-08 62.8 104 45.2
BcaC04g22938 Brassica carinata HOM05D001533 ORTHO05D019802 4.2e-07 59.7 98 44.9


User provided reference genes

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