Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.0e-71 272.3 135 100.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 5.8e-47 191.0 123 72.4
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 6.0e-44 181.0 124 74.2
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 3.3e-42 175.3 121 65.3
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 5.6e-42 174.5 114 75.4
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 3.6e-41 171.8 96 74.0
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 3.6e-41 171.8 125 68.0
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 6.2e-41 171.0 91 78.0
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.1e-40 170.2 123 63.4
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.8e-40 169.5 123 63.4
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.8e-40 169.5 120 64.2
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 2.3e-40 169.1 96 75.0
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 3.1e-40 168.7 91 80.2
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 5.2e-40 167.9 125 64.8
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 6.8e-40 167.5 125 62.4
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 8.9e-40 167.2 123 63.4
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 8.9e-40 167.2 123 63.4
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 3.4e-39 165.2 123 69.9
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 4.4e-39 164.9 125 68.8
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 4.4e-39 164.9 123 61.8
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 5.8e-39 164.5 123 60.2
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.3e-38 163.3 125 67.2
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 1.3e-38 163.3 125 67.2
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 1.7e-38 162.9 88 77.3
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 3.8e-38 161.8 98 74.5
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 3.8e-38 161.8 123 61.0
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 6.4e-38 161.0 123 59.3
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 1.9e-37 159.5 91 74.7
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.9e-37 159.5 155 52.3
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 3.2e-37 158.7 123 65.9
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 5.4e-37 157.9 123 66.7
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 5.4e-37 157.9 123 66.7
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 5.4e-37 157.9 126 61.1
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 5.4e-37 157.9 123 63.4
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 7.1e-37 157.5 123 62.6
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 7.1e-37 157.5 123 62.6
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 7.1e-37 157.5 123 62.6
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 7.1e-37 157.5 123 62.6
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 7.1e-37 157.5 123 62.6
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 9.2e-37 157.1 123 63.4
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 9.2e-37 157.1 123 63.4
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.6e-36 156.4 123 59.3
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.6e-36 156.4 123 59.3
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.6e-36 156.4 123 59.3
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 2.1e-36 156.0 124 62.9
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 2.7e-36 155.6 123 60.2
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 3.5e-36 155.2 108 64.8
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 3.5e-36 155.2 123 56.1
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 4.6e-36 154.8 118 57.6
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 6.0e-36 154.5 132 56.8
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.8e-36 154.1 124 60.5
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 7.8e-36 154.1 124 60.5
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 7.8e-36 154.1 96 68.8
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 7.8e-36 154.1 123 64.2
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 7.8e-36 154.1 123 59.3
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 1.0e-35 153.7 126 58.7
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-35 153.3 123 61.8
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.3e-35 152.5 123 62.6
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 2.3e-35 152.5 123 60.2
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.3e-35 152.5 131 56.5
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 3.0e-35 152.1 123 67.5
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 3.0e-35 152.1 123 66.7
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 3.9e-35 151.8 96 66.7
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 3.9e-35 151.8 126 57.9
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 3.9e-35 151.8 124 60.5
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 3.9e-35 151.8 93 69.9
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 3.9e-35 151.8 125 56.8
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 3.9e-35 151.8 124 60.5
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 3.9e-35 151.8 125 59.2
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 8.6e-35 150.6 96 64.6
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.1e-34 150.2 123 56.9
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.5e-34 149.8 83 77.1
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.5e-34 149.8 124 58.9
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.9e-34 149.4 117 63.2
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.9e-34 149.4 91 70.3
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.5e-34 149.1 88 72.7
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.5e-34 149.1 124 59.7
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 3.3e-34 148.7 123 62.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 3.3e-34 148.7 124 59.7
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 4.3e-34 148.3 105 62.9
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 9.6e-34 147.1 119 58.8
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 2.1e-33 146.0 95 64.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 2.8e-33 145.6 116 60.3
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.8e-33 145.6 89 67.4
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 4.7e-33 144.8 89 67.4
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 8.1e-33 144.1 83 69.9
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.1e-32 143.7 76 80.3
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 1.1e-32 143.7 126 59.5
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.4e-32 143.3 123 62.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.4e-32 142.5 104 62.5
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 3.1e-32 142.1 89 67.4
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 4.0e-32 141.7 87 67.8
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.4e-31 138.7 140 52.9
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 4.4e-31 138.3 123 56.1
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 4.4e-31 138.3 126 51.6
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 5.8e-31 137.9 123 53.7
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.2e-30 136.0 72 80.6
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 5.4e-29 131.3 96 62.5
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 3.5e-28 128.6 108 63.9
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 2.3e-27 125.9 160 43.8
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 3.9e-27 125.2 123 52.8
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 8.7e-27 124.0 98 60.2
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 8.7e-27 124.0 117 53.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 1.9e-26 122.9 96 60.4
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.3e-26 122.1 98 58.2
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 101 59.4
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 101 59.4
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 2.4e-24 115.9 69 75.4
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 3.1e-24 115.5 59 83.1
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 9.0e-24 114.0 108 54.6
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.6e-23 112.5 123 49.6
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.6e-23 112.5 106 52.8
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 4.5e-23 111.7 97 56.7
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 2.4e-21 105.9 59 72.9
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.4e-21 105.9 103 53.4
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 2.3e-19 99.4 95 50.5
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.1e-18 97.1 71 66.2
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 4.3e-18 95.1 58 67.2
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 6.2e-17 91.3 100 45.0
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 8.7e-11 70.9 38 78.9
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 8.2e-09 64.3 64 51.6
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 4.0e-08 62.0 67 46.3
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 4.0e-08 62.0 64 59.4
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 7.6e-07 57.8 33 66.7


User provided reference genes

Program Settings