Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.0e-176 623.2 306 100.0
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 2.3e-107 392.9 311 66.6
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 3.9e-107 392.1 307 66.8
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 3.9e-107 392.1 306 66.7
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 1.2e-105 387.1 301 67.1
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.6e-105 386.7 308 67.2
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 2.8e-105 386.0 309 66.7
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 2.8e-105 386.0 306 66.0
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 1.1e-104 384.0 305 66.9
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.4e-104 383.6 286 70.3
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 1.8e-104 383.3 288 69.4
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 2.3e-104 382.9 319 64.9
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 2.3e-104 382.9 304 66.4
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 2.3e-104 382.9 306 64.4
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 6.8e-104 381.3 286 68.9
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 8.9e-104 380.9 304 66.8
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.2e-103 380.6 314 66.6
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.5e-103 380.2 317 64.7
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 3.4e-103 379.0 304 65.8
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 4.4e-103 378.6 307 65.5
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 5.8e-103 378.3 308 66.6
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 7.5e-103 377.9 298 66.8
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.7e-102 376.7 304 67.1
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 2.2e-102 376.3 308 64.9
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 2.2e-102 376.3 298 66.4
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 2.2e-102 376.3 289 67.8
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 2.9e-102 375.9 285 68.8
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 2.9e-102 375.9 298 66.4
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 8.3e-102 374.4 304 66.8
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 1.4e-101 373.6 292 68.2
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.4e-101 373.6 312 65.1
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.4e-101 373.6 276 68.8
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 1.9e-101 373.2 289 67.1
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 3.2e-101 372.5 304 65.1
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 5.4e-101 371.7 305 64.9
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 1.6e-100 370.2 309 66.3
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 2.1e-100 369.8 306 64.4
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 3.5e-100 369.0 314 64.6
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 4.6e-100 368.6 315 64.1
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 6.0e-100 368.2 314 65.3
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 6.0e-100 368.2 296 66.2
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.0e-99 367.5 317 63.4
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.0e-99 367.5 317 63.4
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.0e-99 367.5 300 64.7
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 1.0e-99 367.5 292 66.1
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 1.3e-99 367.1 317 63.1
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.3e-99 367.1 317 63.1
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 1.3e-99 367.1 301 64.1
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 2.3e-99 366.3 304 63.2
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.0e-99 365.9 318 62.6
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 5.1e-99 365.2 309 64.4
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 6.6e-99 364.8 291 65.6
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 5.6e-98 361.7 286 66.4
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 7.3e-98 361.3 305 62.6
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 1.2e-97 360.5 284 66.2
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 8.1e-97 357.8 309 63.1
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 8.1e-97 357.8 308 63.6
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 3.1e-96 355.9 308 63.3
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 1.5e-95 353.6 290 64.8
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.5e-95 353.6 302 62.6
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 3.4e-95 352.4 295 62.4
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 7.6e-95 351.3 306 63.1
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 2.9e-94 349.4 243 72.8
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 4.9e-94 348.6 304 60.9
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 1.9e-93 346.7 312 60.6
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 7.1e-93 344.7 302 61.6
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 1.6e-92 343.6 299 60.9
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.1e-92 343.2 308 61.0
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 2.7e-92 342.8 307 59.9
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 2.7e-92 342.8 284 65.1
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 4.6e-92 342.0 317 59.3
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 7.8e-92 341.3 296 61.5
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 7.8e-92 341.3 304 61.8
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 1.3e-91 340.5 287 62.0
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.3e-91 340.5 304 59.5
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 1.7e-91 340.1 312 59.6
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.9e-90 336.7 312 58.7
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 4.3e-90 335.5 296 60.1
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 9.6e-90 334.3 301 60.8
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 9.6e-90 334.3 301 60.5
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 1.2e-89 334.0 295 61.4
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 1.6e-89 333.6 287 62.0
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 3.6e-89 332.4 311 57.6
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 6.2e-89 331.6 314 57.6
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 8.1e-89 331.3 295 60.7
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 1.4e-88 330.5 282 62.1
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.4e-88 329.7 296 60.1
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 2.4e-88 329.7 296 60.1
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 3.1e-88 329.3 318 56.0
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 3.1e-88 329.3 318 56.0
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 3.1e-88 329.3 295 60.3
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 3.1e-88 329.3 233 68.7
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 4.0e-88 328.9 293 59.7
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 5.3e-88 328.6 296 60.1
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.2e-87 327.4 294 59.9
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 1.5e-87 327.0 318 55.7
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 1.5e-87 327.0 318 55.7
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 5.8e-87 325.1 293 59.0
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 1.7e-86 323.6 297 59.6
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 7.3e-82 308.1 241 65.1
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 2.1e-81 306.6 239 64.9
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 5.3e-80 302.0 309 54.0
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.2e-79 300.8 295 57.3
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 3.4e-79 299.3 322 52.8
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 2.2e-78 296.6 330 51.5
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 8.4e-78 294.7 268 60.8
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 9.3e-77 291.2 304 55.3
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 3.5e-76 289.3 293 53.2
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 4.6e-76 288.9 295 55.6
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 5.6e-74 282.0 194 71.1
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.6e-73 280.4 193 72.5
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 5.8e-71 271.9 194 68.6
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 3.8e-70 269.2 239 59.8
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.9e-69 266.9 173 75.7
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 2.5e-69 266.5 232 60.3
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 4.0e-64 249.2 252 52.4
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 9.0e-64 248.1 188 67.0
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 2.6e-63 246.5 284 47.9
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 7.7e-55 218.4 308 42.2
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 4.2e-53 212.6 245 45.3
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 9.4e-53 211.5 240 47.5
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.5e-47 194.1 306 42.8
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 1.5e-42 177.6 211 46.0
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 4.8e-41 172.6 187 52.9
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 1.3e-38 164.5 238 39.1
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.8e-27 127.5 328 30.5
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.8e-27 127.5 82 81.7
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.3e-22 111.3 72 80.6
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 4.2e-21 106.3 211 32.2
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.7e-20 103.6 288 28.8
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.7e-17 94.4 51 86.3
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 1.7e-17 94.4 46 95.7
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 1.0e-14 85.1 44 88.6
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 5.0e-06 56.2 181 26.5
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 5.0e-06 56.2 204 27.0
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 5.0e-06 56.2 205 25.4
FvH4_5g19731 Fragaria vesca HOM05D005750 ORTHO05D035649 6.6e-06 55.8 63 55.6


User provided reference genes

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