Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 2.2e-79 298.9 150 100.0
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 4.9e-79 297.7 150 99.3
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 4.0e-65 251.5 150 84.0
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 5.2e-49 198.0 147 70.7
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 5.2e-49 198.0 145 70.3
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 2.0e-48 196.1 145 69.0
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 3.8e-47 191.8 147 68.7
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.9e-47 191.4 149 66.4
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 8.4e-47 190.7 149 67.8
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.9e-46 189.5 146 64.4
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 3.2e-46 188.7 150 66.7
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 4.2e-46 188.3 147 66.7
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 5.4e-46 188.0 147 66.7
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 5.4e-46 188.0 147 66.0
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 7.1e-46 187.6 146 62.3
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.2e-45 186.8 147 66.0
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.2e-45 186.8 146 64.4
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 2.1e-45 186.0 147 63.3
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 2.1e-45 186.0 149 61.7
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 2.1e-45 186.0 148 64.2
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.7e-45 185.7 147 68.0
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 2.7e-45 185.7 147 63.9
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 3.5e-45 185.3 147 65.3
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 3.5e-45 185.3 147 65.3
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 4.6e-45 184.9 147 64.6
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 6.0e-45 184.5 147 61.9
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 7.8e-45 184.1 147 63.9
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 7.8e-45 184.1 147 61.9
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 7.8e-45 184.1 147 61.9
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 1.0e-44 183.7 147 64.6
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 1.3e-44 183.3 147 65.3
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 1.3e-44 183.3 147 64.6
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 5.1e-44 181.4 147 66.0
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.1e-43 180.3 146 64.4
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.9e-43 179.5 152 63.2
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 2.5e-43 179.1 147 61.2
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 3.3e-43 178.7 148 60.8
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 3.3e-43 178.7 146 64.4
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.3e-43 178.7 152 63.2
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 3.3e-43 178.7 146 64.4
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 4.3e-43 178.3 148 62.8
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 5.6e-43 177.9 149 65.8
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 7.3e-43 177.6 152 62.5
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 7.3e-43 177.6 149 61.1
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 7.3e-43 177.6 147 61.2
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 9.6e-43 177.2 147 61.9
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 1.3e-42 176.8 146 64.4
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.3e-42 176.8 154 59.7
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 1.6e-42 176.4 146 62.3
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.6e-42 176.4 152 57.9
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 1.6e-42 176.4 147 61.2
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 2.1e-42 176.0 153 59.5
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 2.1e-42 176.0 147 65.3
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 4.8e-42 174.9 147 57.8
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 1.1e-41 173.7 149 60.4
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.4e-41 173.3 147 60.5
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.8e-41 172.9 147 59.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 2.4e-41 172.6 153 58.2
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 2.4e-41 172.6 147 59.2
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 3.1e-41 172.2 150 60.0
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 3.1e-41 172.2 146 62.3
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 4.0e-41 171.8 138 60.9
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 4.0e-41 171.8 139 63.3
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 5.3e-41 171.4 147 58.5
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 6.9e-41 171.0 153 58.8
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 6.9e-41 171.0 147 59.9
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 9.0e-41 170.6 148 62.2
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.2e-40 170.2 152 60.5
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 2.6e-40 169.1 147 59.2
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 4.5e-40 168.3 147 59.9
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 4.5e-40 168.3 148 59.5
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 5.8e-40 167.9 146 58.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 5.8e-40 167.9 146 58.2
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 5.8e-40 167.9 152 59.9
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 9.9e-40 167.2 154 56.5
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.3e-39 166.8 153 57.5
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.3e-39 166.8 184 53.8
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 1.7e-39 166.4 147 62.6
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 1.7e-39 166.4 147 58.5
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 1.7e-39 166.4 147 58.5
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 1.7e-39 166.4 150 59.3
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.7e-39 166.4 147 61.2
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 2.9e-39 165.6 145 58.6
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 4.9e-39 164.9 153 56.9
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 4.9e-39 164.9 153 56.9
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 4.9e-39 164.9 153 56.9
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 1.4e-38 163.3 146 58.9
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.9e-38 162.9 152 59.2
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 3.2e-38 162.2 149 58.4
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 1.6e-37 159.8 119 66.4
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 1.6e-37 159.8 153 54.9
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.6e-37 159.8 147 57.1
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 2.7e-37 159.1 147 55.1
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 3.5e-37 158.7 145 57.9
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 4.6e-37 158.3 147 55.8
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 7.9e-37 157.5 147 59.2
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.8e-36 156.4 151 53.6
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 3.0e-36 155.6 147 55.1
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 3.9e-36 155.2 137 60.6
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 8.7e-36 154.1 153 53.6
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 8.7e-36 154.1 151 53.6
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 8.7e-36 154.1 126 62.7
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 8.7e-36 154.1 161 54.0
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 1.5e-35 153.3 149 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.3e-34 150.2 148 52.0
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 2.8e-34 149.1 140 57.9
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 2.4e-33 146.0 113 62.8
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 2.9e-31 139.0 149 55.7
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 8.4e-31 137.5 149 53.7
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.1e-30 137.1 147 51.0
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.3e-28 130.2 150 47.3
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.3e-28 130.2 150 47.3
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 7.6e-24 114.4 118 53.4
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.3e-23 113.6 146 46.6
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 6.5e-23 111.3 100 59.0
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.9e-22 109.8 144 47.2
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.2e-21 107.1 136 45.6
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 2.7e-21 105.9 138 46.4
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 2.3e-20 102.8 155 42.6
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 3.0e-20 102.4 109 55.0
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 5.1e-20 101.7 76 68.4
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 1.5e-19 100.1 64 73.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.5e-19 100.1 61 77.0
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 5.3e-17 91.7 73 61.6
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 9.0e-17 90.9 89 50.6
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.0e-16 89.7 77 57.1
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 3.4e-16 89.0 74 66.2
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 3.2e-14 82.4 54 74.1
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.2e-13 80.5 46 78.3
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 7.4e-11 71.2 147 33.3
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 1.4e-09 67.0 118 39.8
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 6.5e-07 58.2 101 36.6
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.4e-06 57.0 90 45.6


User provided reference genes

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