Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 3.4e-118 428.3 211 100.0
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 5.4e-92 341.3 194 87.1
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 5.2e-79 298.1 150 99.3
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 5.1e-74 281.6 192 74.5
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 1.1e-73 280.4 194 73.7
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.3e-73 278.9 193 72.0
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 3.3e-73 278.9 190 73.2
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 9.6e-73 277.3 192 74.0
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.3e-72 276.9 190 72.1
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 3.6e-72 275.4 207 68.1
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 3.6e-72 275.4 195 71.8
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 6.2e-72 274.6 192 72.9
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 8.1e-72 274.2 197 67.5
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 1.1e-71 273.9 191 71.7
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.1e-71 273.9 192 71.9
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.1e-71 273.9 192 71.4
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.4e-71 273.5 191 70.7
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 3.1e-71 272.3 192 72.9
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 3.1e-71 272.3 191 70.7
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 5.3e-71 271.6 192 71.4
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 6.9e-71 271.2 206 65.0
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 6.9e-71 271.2 207 66.7
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.5e-70 270.0 191 69.1
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.4e-70 268.9 196 69.4
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 4.4e-70 268.5 192 69.8
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 5.8e-70 268.1 207 64.7
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 5.8e-70 268.1 192 69.8
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 5.8e-70 268.1 193 68.9
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 7.6e-70 267.7 207 64.7
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 7.6e-70 267.7 192 69.8
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.3e-69 266.9 192 71.4
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.3e-69 266.9 196 68.9
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.3e-69 266.9 192 67.7
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 1.7e-69 266.5 195 68.2
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.2e-69 266.2 191 70.7
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.2e-69 266.2 196 69.4
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 2.2e-69 266.2 191 70.2
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.2e-69 266.2 194 72.2
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 4.9e-69 265.0 199 66.8
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 6.4e-69 264.6 191 70.2
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 8.4e-69 264.2 208 63.9
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 1.1e-68 263.8 208 65.9
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 1.1e-68 263.8 195 66.7
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.1e-68 263.8 203 67.5
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 3.2e-68 262.3 191 69.6
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 3.2e-68 262.3 192 66.7
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 5.4e-68 261.5 192 65.1
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 7.1e-68 261.2 191 69.1
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.2e-67 260.4 194 67.0
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.2e-67 260.4 192 67.7
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 2.1e-67 259.6 198 65.7
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 3.5e-67 258.8 192 66.7
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 3.5e-67 258.8 207 63.3
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 4.6e-67 258.5 194 66.5
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 6.0e-67 258.1 196 65.3
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 6.0e-67 258.1 191 69.6
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 7.9e-67 257.7 192 66.1
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 1.0e-66 257.3 197 67.5
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 1.0e-66 257.3 193 69.4
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-66 256.9 197 64.0
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 1.7e-66 256.5 195 66.2
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.7e-66 256.5 191 68.1
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.7e-66 256.5 192 65.6
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 2.3e-66 256.1 198 64.6
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 3.0e-66 255.8 198 65.2
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 3.0e-66 255.8 195 67.2
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 8.7e-66 254.2 208 63.5
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.9e-65 253.1 199 63.8
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.9e-65 253.1 192 67.7
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 1.9e-65 253.1 212 63.7
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 2.5e-65 252.7 198 64.6
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 3.3e-65 252.3 182 67.6
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 3.3e-65 252.3 206 62.1
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 3.3e-65 252.3 206 62.1
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 4.3e-65 251.9 192 65.6
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 4.3e-65 251.9 192 65.6
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 4.3e-65 251.9 192 65.6
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 7.3e-65 251.1 190 65.8
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 7.3e-65 251.1 207 61.8
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 9.6e-65 250.8 198 64.1
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 9.6e-65 250.8 198 64.1
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 9.6e-65 250.8 198 64.1
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 1.6e-64 250.0 192 68.2
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 3.6e-64 248.8 197 66.0
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 1.1e-63 247.3 192 67.2
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.4e-63 246.9 260 55.8
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.8e-63 246.5 192 65.6
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 3.1e-63 245.7 198 62.6
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 4.0e-63 245.4 179 68.2
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 4.0e-63 245.4 182 68.7
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 1.5e-62 243.4 206 62.1
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 2.0e-62 243.0 190 64.7
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 3.4e-62 242.3 196 61.2
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 3.4e-62 242.3 192 63.5
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 9.9e-62 240.7 194 62.9
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 1.7e-61 240.0 198 61.6
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 2.2e-61 239.6 196 61.7
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 2.2e-61 239.6 192 63.0
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 3.8e-61 238.8 171 69.0
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 8.4e-61 237.7 194 63.4
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.2e-59 233.8 190 61.1
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 1.8e-58 229.9 196 58.2
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 3.9e-58 228.8 194 62.9
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 6.7e-58 228.0 158 69.0
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 2.0e-54 216.5 203 61.1
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.0e-53 214.2 196 55.6
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 3.8e-53 212.2 197 56.9
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.1e-51 206.5 207 56.0
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.3e-50 203.8 195 53.3
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 1.3e-50 203.8 195 53.8
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 2.1e-48 196.4 191 55.0
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.7e-48 195.7 140 66.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 8.4e-45 184.5 106 82.1
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 2.1e-43 179.9 126 70.6
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 6.1e-43 178.3 181 53.6
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 6.7e-42 174.9 118 71.2
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 8.7e-42 174.5 134 62.7
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.9e-41 173.3 139 64.0
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 7.4e-41 171.4 138 60.9
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 6.3e-40 168.3 200 48.0
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.3e-39 165.2 91 82.4
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 2.9e-37 159.5 182 48.9
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 3.8e-29 132.5 126 58.7
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.6e-27 127.1 198 42.9
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 1.4e-26 124.0 65 83.1
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 2.0e-25 120.2 190 39.5
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 8.2e-24 114.8 118 53.4
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 4.5e-22 109.0 75 68.0
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 5.9e-22 108.6 55 89.1
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.1e-20 104.4 55 83.6
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 1.2e-19 100.9 75 69.3
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 4.8e-16 89.0 74 66.2
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.8e-16 89.0 77 57.1
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 4.5e-14 82.4 54 74.1
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 2.0e-09 67.0 118 39.8
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 9.1e-07 58.2 101 36.6
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.6e-06 57.4 90 45.6


User provided reference genes

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