Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002289.1 Olea europaea HOM05D008048 ORTHO05D010199 1.4e-125 453.0 235 100.0
MSTRG.4161 Avicennia marina HOM05D008048 ORTHO05D010199 1.6e-81 306.6 290 57.9
Migut.G00487 Erythranthe guttata HOM05D008048 ORTHO05D010199 5.1e-75 285.0 290 55.5
TAR362G0870 Trochodendron aralioides HOM05D008048 ORTHO05D010199 5.9e-71 271.6 290 50.3
Cfa014771 Carpinus fangiana HOM05D008048 ORTHO05D010199 1.0e-70 270.8 290 51.0
Hma1.2p1_0385F.1_g141480 Hydrangea macrophylla HOM05D008048 ORTHO05D010199 2.5e-69 266.2 226 59.7
Rhsim04G0173500 Rhododendron simsii HOM05D008048 ORTHO05D010199 2.5e-69 266.2 226 59.3
Haze_11446 Corylus avellana HOM05D008048 ORTHO05D010199 3.2e-69 265.8 290 50.3
PGSC0003DMG400017154 Solanum tuberosum HOM05D008048 ORTHO05D010199 4.8e-65 251.9 223 58.3
MELO3C023035.2 Cucumis melo HOM05D008048 ORTHO05D010199 8.2e-65 251.1 290 50.0
Nitab4.5_0002709g0050 Nicotiana tabacum HOM05D008048 ORTHO05D010199 8.2e-65 251.1 211 60.2
Nn1g02915 Nelumbo nucifera HOM05D008048 ORTHO05D010199 1.8e-64 250.0 290 48.3
Peaxi162Scf00033g00292 Petunia axillaris HOM05D008048 ORTHO05D010199 1.8e-64 250.0 224 58.5
Lsat_1_v5_gn_6_68700 Lactuca sativa HOM05D008048 ORTHO05D010199 6.9e-64 248.1 226 59.3
Sc25g0003600 Simmondsia chinensis HOM05D008048 ORTHO05D010199 1.3e-62 243.8 291 47.1
QL06p020732 Quercus lobata HOM05D008048 ORTHO05D010199 1.7e-62 243.4 289 48.4
CAN.G220.87 Capsicum annuum HOM05D008048 ORTHO05D010199 2.9e-62 242.7 224 55.8
Ah.04g155360 Amaranthus hybridus HOM05D008048 ORTHO05D010199 3.8e-62 242.3 226 54.4
Sopen09g033500 Solanum pennellii HOM05D008048 ORTHO05D010199 3.8e-62 242.3 224 54.9
CsaV3_2G012520 Cucumis sativus L. HOM05D008048 ORTHO05D010199 5.0e-62 241.9 290 48.6
Potri.008G170900 Populus trichocarpa HOM05D008048 ORTHO05D010199 3.2e-61 239.2 292 46.6
Sed0019169 Sechium edule HOM05D008048 ORTHO05D010199 3.2e-61 239.2 226 55.8
SalBow3G4414 Salvia bowleyana HOM05D008048 ORTHO05D010199 5.5e-61 238.4 226 59.7
MD13G1219500 Malus domestica HOM05D008048 ORTHO05D010199 1.6e-60 236.9 291 46.0
Prupe.1G046300 Prunus persica HOM05D008048 ORTHO05D010199 1.6e-60 236.9 226 55.8
Sabra08G0130700 Salix brachista HOM05D008048 ORTHO05D010199 2.7e-60 236.1 292 46.9
Dinv29814 Davidia involucrata HOM05D008048 ORTHO05D010199 4.6e-60 235.3 193 62.7
AUR62002183 Chenopodium quinoa HOM05D008048 ORTHO05D010199 5.1e-59 231.9 234 52.6
Lalb_Chr19g0128481 Lupinus albus HOM05D008048 ORTHO05D010199 2.0e-58 229.9 292 45.5
Potri.010G067000 Populus trichocarpa HOM05D008048 ORTHO05D010199 2.5e-58 229.6 225 53.3
COL.COLO4_15948 Corchorus olitorius HOM05D008048 ORTHO05D010199 9.7e-58 227.6 290 46.9
Aqoxy5G00167 Aquilegia oxysepala HOM05D008048 ORTHO05D010199 1.3e-57 227.3 293 45.4
Sabra10G0040500 Salix brachista HOM05D008048 ORTHO05D010199 2.2e-57 226.5 292 45.5
Ciclev10005562m.g Citrus clementina HOM05D008048 ORTHO05D010199 5.3e-56 221.9 290 42.8
RcHm_v2.0_Chr4g0394961 Rosa chinensis HOM05D008048 ORTHO05D010199 2.0e-55 219.9 216 55.1
VMungo0720G0410 Vigna mungo HOM05D008048 ORTHO05D010199 2.6e-55 219.5 291 44.3
Atru.chr4.1935 Acer truncatum HOM05D008048 ORTHO05D010199 5.9e-55 218.4 290 43.8
Duzib151G0082 Durio zibethinus HOM05D008048 ORTHO05D010199 5.9e-55 218.4 290 45.9
Psat6g106440 Pisum sativum HOM05D008048 ORTHO05D010199 7.7e-55 218.0 213 54.5
Gorai.002G026300 Gossypium raimondii HOM05D008048 ORTHO05D010199 1.0e-54 217.6 227 51.5
TWI73G0695 Tripterygium wilfordii HOM05D008048 ORTHO05D010199 1.0e-54 217.6 215 52.6
Lj6P622T54 Lonicera japonica HOM05D008048 ORTHO05D010199 3.8e-54 215.7 160 66.2
Gohir.A01G025700 Gossypium hirsutum HOM05D008048 ORTHO05D010199 5.0e-54 215.3 227 51.1
Actinidia20832 Actinidia chinensis HOM05D008048 ORTHO05D010199 8.5e-54 214.5 197 57.9
Gohir.D01G023415 Gossypium hirsutum HOM05D008048 ORTHO05D010199 1.4e-53 213.8 227 51.1
PGR004G1266 Punica granatum HOM05D008048 ORTHO05D010199 1.4e-53 213.8 230 53.0
TPR.G28751 Trifolium pratense HOM05D008048 ORTHO05D010199 1.9e-53 213.4 226 51.8
SGA_v2.0_scaffold67G22704 Striga asiatica HOM05D008048 ORTHO05D010199 2.5e-53 213.0 227 55.5
MBI07_g18713_MAGBIO Magnolia biondii HOM05D008048 ORTHO05D010199 4.2e-53 212.2 290 43.1
Phvul.007G271100 Phaseolus vulgaris HOM05D008048 ORTHO05D010199 9.4e-53 211.1 212 53.8
Manes.15G044600 Manihot esculenta HOM05D008048 ORTHO05D010199 2.3e-51 206.5 291 40.9
MD16G1225000 Malus domestica HOM05D008048 ORTHO05D010199 8.8e-51 204.5 226 50.0
CiPaw.02G108000 Carya illinoinensis HOM05D008048 ORTHO05D010199 2.8e-49 199.5 276 44.6
Medtr1g045060 Medicago truncatula HOM05D008048 ORTHO05D010199 2.8e-49 199.5 225 47.1
Lj6g0004811 Lotus japonicus HOM05D008048 ORTHO05D010199 6.3e-49 198.4 226 50.9
DCAR_027338 Daucus carota HOM05D008048 ORTHO05D010199 3.1e-48 196.1 188 52.1
FAN17G0666 Fragaria x ananassa HOM05D008048 ORTHO05D010199 3.1e-48 196.1 217 49.3
CAN.G220.88 Capsicum annuum HOM05D008048 ORTHO05D010199 2.0e-47 193.4 172 58.1
FAN22G2321 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.7e-46 190.3 217 47.9
FvH4_4g04390 Fragaria vesca HOM05D008048 ORTHO05D010199 2.2e-46 189.9 213 48.4
GSVIVG01027901001 Vitis vinifera HOM05D008048 ORTHO05D010199 4.7e-44 182.2 204 52.5
Glyma.20G086000 Glycine max HOM05D008048 ORTHO05D010199 1.3e-41 174.1 189 50.3
ATR0736G121 Amborella trichopoda HOM05D008048 ORTHO05D010199 4.5e-39 165.6 174 51.7
Cpa.g.sc44.13 Carica papaya HOM05D008048 ORTHO05D010199 4.2e-37 159.1 152 52.0
FAN12G0723 Fragaria x ananassa HOM05D008048 ORTHO05D010199 3.6e-36 156.0 137 56.9
FAN12G2845 Fragaria x ananassa HOM05D008048 ORTHO05D010199 3.6e-36 156.0 137 56.9
Thecc.04G262100 Theobroma cacao HOM05D008048 ORTHO05D010199 3.0e-35 152.9 224 42.0
EL10Ac3g04955 Beta vulgaris HOM05D008048 ORTHO05D010199 1.7e-30 137.1 116 58.6
Ca_11923_v3 Cicer arietinum L. HOM05D008048 ORTHO05D010199 1.2e-23 114.4 109 53.2
Mapoly0103s0043 Marchantia polymorpha HOM05D007245 ORTHO05D009049 1.6e-20 104.0 213 31.0
SGA_v2.0_scaffold47G17641 Striga asiatica HOM05D007245 ORTHO05D009049 6.4e-17 92.0 203 32.5
Sopen05g004430 Solanum pennellii HOM05D007245 ORTHO05D009049 1.8e-16 90.5 194 31.4
ATR0582G351 Amborella trichopoda HOM05D007245 ORTHO05D009049 2.4e-16 90.1 200 33.0
PGSC0003DMG400030518 Solanum tuberosum HOM05D007245 ORTHO05D009049 2.4e-16 90.1 194 30.9
SEGI_38415 Sequoiadendron giganteum HOM05D007245 ORTHO05D009049 4.1e-16 89.4 190 31.1
Nitab4.5_0005095g0010 Nicotiana tabacum HOM05D007245 ORTHO05D009049 9.2e-16 88.2 174 32.8
Hma1.2p1_0421F.1_g149920 Hydrangea macrophylla HOM05D007245 ORTHO05D009049 1.6e-15 87.4 188 31.9
Gohir.A11G062100 Gossypium hirsutum HOM05D007245 ORTHO05D009049 2.0e-15 87.0 206 32.0
Oeu050155.1 Olea europaea HOM05D007245 ORTHO05D009049 2.7e-15 86.7 192 31.2
Dinv33262 Davidia involucrata HOM05D007245 ORTHO05D009049 3.5e-15 86.3 179 31.8
unitig_0.g2407 Utricularia gibba HOM05D007245 ORTHO05D009049 4.6e-15 85.9 198 30.8
Thhalv10014197m.g Eutrema salsugineum HOM05D007245 ORTHO05D009049 5.9e-15 85.5 179 29.6
Nitab4.5_0005411g0120 Nicotiana tabacum HOM05D007245 ORTHO05D009049 5.9e-15 85.5 174 32.2
Gohir.D11G065900 Gossypium hirsutum HOM05D007245 ORTHO05D009049 7.8e-15 85.1 189 32.3
Gorai.007G071400 Gossypium raimondii HOM05D007245 ORTHO05D009049 7.8e-15 85.1 189 32.3
PSO478G0086 Papaver somniferum HOM05D007245 ORTHO05D009049 7.8e-15 85.1 165 32.1
Nn3g16217 Nelumbo nucifera HOM05D007245 ORTHO05D009049 1.0e-14 84.7 186 31.7
Duzib147G1224 Durio zibethinus HOM05D007245 ORTHO05D009049 1.3e-14 84.3 188 31.9
PSO017G6414 Papaver somniferum HOM05D007245 ORTHO05D009049 1.3e-14 84.3 165 32.1
RcHm_v2.0_Chr2g0176701 Rosa chinensis HOM05D007245 ORTHO05D009049 1.3e-14 84.3 195 31.8
Sed0008898 Sechium edule HOM05D007245 ORTHO05D009049 1.3e-14 84.3 179 30.7
Sed0013025 Sechium edule HOM05D007245 ORTHO05D009049 1.3e-14 84.3 182 31.3
Thecc.04G050800 Theobroma cacao HOM05D007245 ORTHO05D009049 1.3e-14 84.3 188 30.9
Actinidia37711 Actinidia chinensis HOM05D007245 ORTHO05D009049 2.3e-14 83.6 179 31.8
Ah.03g136550 Amaranthus hybridus HOM05D001378 ORTHO05D001249 3.0e-14 83.2 203 32.0
Dinv25610 Davidia involucrata HOM05D007245 ORTHO05D009049 3.0e-14 83.2 179 33.0
TAR629G1424 Trochodendron aralioides HOM05D007245 ORTHO05D009049 3.0e-14 83.2 188 30.9
CSS0018621 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 3.9e-14 82.8 188 30.3
CARHR199540 Cardamine hirsuta HOM05D007245 ORTHO05D009049 3.9e-14 82.8 179 27.4
MSTRG.15573 Avicennia marina HOM05D007245 ORTHO05D009049 5.0e-14 82.4 194 28.9
CSS0002235 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 5.0e-14 82.4 188 30.3
Pp3c4_3800 Physcomitrium patens HOM05D007245 ORTHO05D009049 5.0e-14 82.4 177 31.1
SalBow7G3959 Salvia bowleyana HOM05D007245 ORTHO05D009049 5.0e-14 82.4 178 30.3
ClCG05G012490 Citrullus lanatus HOM05D007245 ORTHO05D009049 6.6e-14 82.0 179 30.7
CAN.G1489.19 Capsicum annuum HOM05D007245 ORTHO05D009049 8.6e-14 81.6 179 26.8
Solyc09g090560.2 Solanum lycopersicum HOM05D008048 ORTHO05D010199 8.6e-14 81.6 87 49.4
MELO3C014761.2 Cucumis melo HOM05D007245 ORTHO05D009049 1.1e-13 81.3 179 30.2
Pp3c8_3270 Physcomitrium patens HOM05D007245 ORTHO05D009049 1.1e-13 81.3 177 31.1
AT5G13890 Arabidopsis thaliana HOM05D007245 ORTHO05D009049 1.5e-13 80.9 179 27.9
CsaV3_3G020030 Cucumis sativus L. HOM05D007245 ORTHO05D009049 1.5e-13 80.9 179 30.2
Manes.11G073800 Manihot esculenta HOM05D007245 ORTHO05D009049 1.5e-13 80.9 183 30.1
TAR374G0050 Trochodendron aralioides HOM05D000179 ORTHO05D009049 1.5e-13 80.9 163 31.9
Atru.chr6.2722 Acer truncatum HOM05D007245 ORTHO05D009049 1.9e-13 80.5 179 30.7
Aqoxy2G01225 Aquilegia oxysepala HOM05D007245 ORTHO05D009049 1.9e-13 80.5 179 30.2
CiPaw.03G000500 Carya illinoinensis HOM05D007245 ORTHO05D009049 2.5e-13 80.1 164 34.8
Cc09_g07550 Coffea canephora HOM05D007245 ORTHO05D009049 2.5e-13 80.1 180 32.2
FvH4_6g31080 Fragaria vesca HOM05D007245 ORTHO05D009049 2.5e-13 80.1 204 30.4
TWI32G1326 Tripterygium wilfordii HOM05D007245 ORTHO05D009049 2.5e-13 80.1 170 31.2
Carub.0006s1208 Capsella rubella HOM05D007245 ORTHO05D009049 3.3e-13 79.7 179 26.8
CDE06G2711 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 3.3e-13 79.7 186 31.2
MBI11_g03703_MAGBIO Magnolia biondii HOM05D007245 ORTHO05D009049 3.3e-13 79.7 227 29.1
Sp6g30110 Schrenkiella parvula HOM05D007245 ORTHO05D009049 3.3e-13 79.7 179 27.9
Haze_14957 Corylus avellana HOM05D007245 ORTHO05D009049 5.6e-13 79.0 196 31.6
Aa31LG11G15470 Aethionema arabicum HOM05D007245 ORTHO05D009049 9.5e-13 78.2 176 28.4
AL6G24530 Arabidopsis lyrata HOM05D007245 ORTHO05D009049 9.5e-13 78.2 179 26.8
AagrBONN_evm.TU.Sc2ySwM_369.440 Anthoceros agrestis HOM05D007245 ORTHO05D009049 1.2e-12 77.8 204 30.4
DCAR_000961 Daucus carota HOM05D007245 ORTHO05D009049 1.2e-12 77.8 179 30.2
TAR365G0106 Trochodendron aralioides HOM05D008048 ORTHO05D010199 1.2e-12 77.8 104 41.3
HanXRQChr09g0245251 Helianthus annuus HOM05D007245 ORTHO05D009049 1.6e-12 77.4 188 29.3
Lj7P619T29 Lonicera japonica HOM05D007245 ORTHO05D009049 1.6e-12 77.4 174 29.9
FAN05G2831 Fragaria x ananassa HOM05D007245 ORTHO05D009049 2.1e-12 77.0 184 30.4
Glyma.19G106200 Glycine max HOM05D007245 ORTHO05D009049 2.8e-12 76.6 204 30.9
Potri.002G237200 Populus trichocarpa HOM05D007245 ORTHO05D009049 2.8e-12 76.6 179 29.6
vmacro18400 Vaccinium macrocarpon HOM05D007245 ORTHO05D009049 2.8e-12 76.6 194 29.9
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 3.6e-12 76.3 109 39.4
Oeu045577.1 Olea europaea HOM05D007245 ORTHO05D009049 3.6e-12 76.3 174 31.0
Sabra02G0180800 Salix brachista HOM05D007245 ORTHO05D009049 3.6e-12 76.3 104 38.5
Migut.K01486 Erythranthe guttata HOM05D007245 ORTHO05D009049 4.7e-12 75.9 181 29.3
SMO329G0038 Selaginella moellendorffii HOM05D007245 ORTHO05D009049 4.7e-12 75.9 166 27.7
BcaC04g24245 Brassica carinata HOM05D007245 ORTHO05D009049 6.2e-12 75.5 180 28.3
Manes.04G095000 Manihot esculenta HOM05D007245 ORTHO05D009049 8.0e-12 75.1 100 39.0
QL02p068579 Quercus lobata HOM05D007245 ORTHO05D009049 8.0e-12 75.1 180 29.4
PGR142G1730 Punica granatum HOM05D007245 ORTHO05D009049 1.0e-11 74.7 220 29.1
MD09G1001100 Malus domestica HOM05D007245 ORTHO05D009049 1.4e-11 74.3 189 28.0
Prupe.7G011800 Prunus persica HOM05D007245 ORTHO05D009049 1.4e-11 74.3 211 26.5
Lsat_1_v5_gn_2_60460 Lactuca sativa HOM05D007245 ORTHO05D009049 1.8e-11 73.9 202 27.2
A10p24470 Brassica napus HOM05D007245 ORTHO05D009049 2.3e-11 73.6 180 28.3
Peaxi162Scf00950g00032 Petunia axillaris HOM05D007245 ORTHO05D009049 3.1e-11 73.2 203 27.1
C09p63210 Brassica napus HOM05D007245 ORTHO05D009049 4.0e-11 72.8 180 28.3
BolC9t59157H Brassica oleracea HOM05D007245 ORTHO05D009049 4.0e-11 72.8 180 28.3
BraA10t44512Z Brassica rapa HOM05D007245 ORTHO05D009049 4.0e-11 72.8 180 27.8
RcHm_v2.0_Chr2g0137761 Rosa chinensis HOM05D007245 ORTHO05D009049 4.0e-11 72.8 205 30.7
BcaC04g19069 Brassica carinata HOM05D007245 ORTHO05D009049 5.2e-11 72.4 180 28.3
Cpa.g.sc70.41 Carica papaya HOM05D007245 ORTHO05D009049 5.2e-11 72.4 190 30.5
Pp3c10_19560 Physcomitrium patens HOM05D007245 ORTHO05D009049 8.9e-11 71.6 197 29.4
SGA_v2.0_scaffold34G13684 Striga asiatica HOM05D007245 ORTHO05D009049 8.9e-11 71.6 210 28.1
THA.LOC104822428 Tarenaya hassleriana HOM05D007245 ORTHO05D009049 1.2e-10 71.2 176 28.4
Duzib187G0347 Durio zibethinus HOM05D007245 ORTHO05D009049 1.5e-10 70.9 188 28.2
Phvul.001G099200 Phaseolus vulgaris HOM05D007245 ORTHO05D009049 2.0e-10 70.5 109 35.8
MD17G1004200 Malus domestica HOM05D007245 ORTHO05D009049 3.4e-10 69.7 180 28.3
ECA238G1127 Erigeron canadensis HOM05D007245 ORTHO05D009049 4.4e-10 69.3 174 28.2
SHI23073 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-10 69.3 186 28.5
Sc03g0005330 Simmondsia chinensis HOM05D007245 ORTHO05D009049 5.8e-10 68.9 180 29.4
Ciclev10016068m.g Citrus clementina HOM05D007245 ORTHO05D009049 9.8e-10 68.2 184 29.3
Lalb_Chr24g0402921 Lupinus albus HOM05D007245 ORTHO05D009049 9.8e-10 68.2 181 28.2
TPR.G31664 Trifolium pratense HOM05D007245 ORTHO05D009049 1.3e-09 67.8 99 37.4
AUR62042868 Chenopodium quinoa HOM05D007245 ORTHO05D009049 2.2e-09 67.0 87 37.9
HPP92_006441 Vanilla planifolia HOM05D007245 ORTHO05D009049 3.7e-09 66.2 162 30.2
VMungo1383G3535 Vigna mungo HOM05D007245 ORTHO05D009049 3.7e-09 66.2 104 34.6
Rhsim08G0037800 Rhododendron simsii HOM05D007245 ORTHO05D009049 4.9e-09 65.9 164 29.9
Ca_08230_v3 Cicer arietinum L. HOM05D007245 ORTHO05D009049 6.4e-09 65.5 110 35.5
Psat3g091920 Pisum sativum HOM05D007245 ORTHO05D009049 6.4e-09 65.5 96 36.5
CDE02G4767 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 3.2e-08 63.2 173 29.5
CANSAT64G0979 Cannabis sativa HOM05D007245 ORTHO05D009049 9.2e-08 61.6 204 26.0
Medtr7g084610 Medicago truncatula HOM05D007245 ORTHO05D009049 2.0e-07 60.5 93 35.5
Lj1g0022763 Lotus japonicus HOM05D007245 ORTHO05D009049 1.3e-06 57.8 90 32.2
Pp3c12_14270 Physcomitrium patens HOM05D007245 ORTHO05D009049 8.6e-06 55.1 122 29.5


User provided reference genes

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