Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 7.6e-63 243.8 136 100.0
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 1.1e-53 213.4 129 88.4
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 6.7e-43 177.6 133 78.9
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 8.7e-43 177.2 134 76.9
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 1.4e-40 169.9 133 74.4
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 4.5e-39 164.9 134 71.6
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.4e-37 159.8 135 71.1
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 5.5e-37 157.9 131 73.3
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 6.0e-36 154.5 136 69.9
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 1.0e-35 153.7 137 68.6
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.8e-35 152.9 137 68.6
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 3.9e-35 151.8 151 66.9
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 5.1e-35 151.4 126 73.8
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 6.7e-35 151.0 133 68.4
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 8.7e-35 150.6 135 70.4
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 8.7e-35 150.6 129 69.8
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 1.1e-34 150.2 125 72.0
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 1.5e-34 149.8 136 69.1
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 1.5e-34 149.8 137 67.2
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 1.9e-34 149.4 133 67.7
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.3e-34 148.3 129 69.8
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 4.3e-34 148.3 136 68.4
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 4.3e-34 148.3 136 68.4
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 5.6e-34 147.9 139 69.1
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 7.4e-34 147.5 123 69.9
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 7.4e-34 147.5 145 66.9
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 1.3e-33 146.7 144 63.2
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 1.3e-33 146.7 128 69.5
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 2.1e-33 146.0 135 67.4
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 2.1e-33 146.0 146 62.3
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 4.8e-33 144.8 139 67.6
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 1.4e-32 143.3 125 70.4
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 1.4e-32 143.3 131 69.5
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 1.8e-32 142.9 145 63.4
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 2.4e-32 142.5 138 65.2
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.4e-32 142.5 137 70.1
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.4e-32 142.5 133 67.7
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 3.1e-32 142.1 143 67.8
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 5.3e-32 141.4 133 67.7
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 9.0e-32 140.6 128 67.2
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.2e-31 140.2 128 67.2
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 1.2e-31 140.2 135 68.1
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 1.5e-31 139.8 132 68.9
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 1.5e-31 139.8 131 65.6
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 2.0e-31 139.4 137 68.6
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 2.6e-31 139.0 135 65.2
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.6e-31 139.0 134 66.4
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 5.8e-31 137.9 132 65.9
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 1.3e-30 136.7 111 73.9
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 1.7e-30 136.3 127 66.1
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 1.7e-30 136.3 132 66.7
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 2.9e-30 135.6 128 65.6
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 3.8e-30 135.2 111 73.0
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 3.8e-30 135.2 135 60.7
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 6.5e-30 134.4 117 70.1
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 8.4e-30 134.0 142 65.5
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 3.2e-29 132.1 139 60.4
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 3.2e-29 132.1 144 63.2
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 4.2e-29 131.7 127 66.9
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 4.2e-29 131.7 133 63.2
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 5.5e-29 131.3 134 63.4
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 5.5e-29 131.3 152 60.5
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 7.1e-29 131.0 142 59.9
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 9.3e-29 130.6 131 67.2
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 9.3e-29 130.6 169 55.6
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 1.2e-28 130.2 131 61.1
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.6e-28 129.8 128 60.9
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 2.7e-28 129.0 132 65.9
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 3.5e-28 128.6 115 67.0
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 4.6e-28 128.3 132 65.9
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 4.6e-28 128.3 132 65.9
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 6.0e-28 127.9 145 59.3
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 6.0e-28 127.9 145 59.3
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 6.0e-28 127.9 136 64.7
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 6.0e-28 127.9 140 60.7
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 6.0e-28 127.9 149 58.4
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 6.0e-28 127.9 131 61.1
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 6.0e-28 127.9 143 59.4
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 7.9e-28 127.5 119 62.2
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.0e-27 127.1 119 68.1
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 2.3e-27 125.9 133 60.9
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 3.0e-27 125.6 142 58.5
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 3.9e-27 125.2 150 56.7
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 3.9e-27 125.2 125 61.6
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 6.7e-27 124.4 140 60.7
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 6.7e-27 124.4 150 56.7
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 6.7e-27 124.4 119 63.9
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 6.7e-27 124.4 131 61.1
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 8.7e-27 124.0 137 62.0
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 1.5e-26 123.2 133 63.2
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 1.9e-26 122.9 97 70.1
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 3.3e-26 122.1 151 57.0
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 5.7e-26 121.3 138 62.3
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 5.7e-26 121.3 138 62.3
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 5.7e-26 121.3 138 62.3
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 5.7e-26 121.3 151 54.3
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 5.7e-26 121.3 196 45.9
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 7.4e-26 120.9 140 59.3
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 9.7e-26 120.6 140 59.3
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 2.2e-25 119.4 102 71.6
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.2e-25 119.4 64 96.9
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 2.8e-25 119.0 109 66.1
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 3.7e-25 118.6 140 59.3
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 3.7e-25 118.6 106 68.9
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 4.8e-25 118.2 133 58.6
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 4.8e-25 118.2 129 59.7
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 4.8e-25 118.2 102 70.6
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 6.3e-25 117.9 78 83.3
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 6.3e-25 117.9 131 62.6
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 8.2e-25 117.5 131 56.5
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 8.2e-25 117.5 78 82.1
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 8.2e-25 117.5 172 49.4
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 1.1e-24 117.1 139 56.8
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 1.1e-24 117.1 144 56.2
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 1.8e-24 116.3 117 61.5
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 1.8e-24 116.3 126 60.3
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 1.8e-24 116.3 135 58.5
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 2.4e-24 115.9 112 62.5
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 4.1e-24 115.2 118 60.2
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 5.3e-24 114.8 131 56.5
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 1.2e-23 113.6 93 69.9
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 1.2e-23 113.6 93 69.9
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 2.0e-23 112.8 65 93.8
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 2.0e-23 112.8 143 57.3
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 4.5e-23 111.7 127 55.9
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.5e-23 111.7 127 55.9
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 4.5e-23 111.7 127 55.9
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 1.3e-22 110.2 91 70.3
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 1.7e-22 109.8 77 76.6
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 2.9e-22 109.0 127 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 3.8e-22 108.6 138 53.6
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 1.1e-21 107.1 118 61.0
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 1.4e-21 106.7 126 54.8
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 1.9e-21 106.3 135 56.3
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.5e-21 105.9 80 72.5
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 2.5e-21 105.9 135 56.3
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 2.5e-21 105.9 178 45.5
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 2.5e-21 105.9 122 56.6
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 5.5e-21 104.8 122 56.6
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 7.2e-21 104.4 132 52.3
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 9.4e-21 104.0 119 57.1
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 1.6e-20 103.2 141 53.2
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 2.1e-20 102.8 138 51.4
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 2.1e-20 102.8 89 68.5
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 6.1e-20 101.3 126 54.8
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 1.4e-19 100.1 128 51.6
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 6.7e-19 97.8 64 84.4
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 8.8e-19 97.4 56 89.3
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 2.5e-18 95.9 138 49.3
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 2.5e-18 95.9 55 87.3
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 2.5e-18 95.9 115 54.8
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 1.3e-17 93.6 138 54.3
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 9.1e-16 87.4 121 50.4
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 1.5e-15 86.7 51 88.2
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 2.0e-15 86.3 60 73.3
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 3.4e-15 85.5 117 50.4
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 7.7e-15 84.3 121 50.4
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 5.0e-14 81.6 95 54.7
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 5.0e-14 81.6 130 50.8
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 1.1e-13 80.5 55 76.4
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 9.4e-13 77.4 116 48.3
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 1.0e-11 73.9 73 58.9
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 6.7e-11 71.2 41 87.8
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 2.6e-07 59.3 37 81.1


User provided reference genes

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