Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001936.1 Olea europaea HOM05D004333 ORTHO05D005363 0.0e+00 1239.9 628 100.0
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 2.1e-216 756.1 581 65.2
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 1.1e-212 743.8 585 63.8
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 2.3e-207 726.1 586 63.3
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 1.1e-204 717.2 581 61.8
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 1.2e-200 703.7 580 60.7
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 4.4e-198 695.3 596 60.6
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 2.7e-187 659.4 600 55.5
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 1.3e-186 657.1 582 56.5
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 2.1e-184 649.8 579 56.5
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 3.7e-181 639.0 578 54.0
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 1.1e-177 627.5 582 55.7
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 4.3e-177 625.5 577 54.1
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 1.6e-176 623.6 540 55.7
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 1.6e-176 623.6 591 52.6
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 2.1e-176 623.2 577 53.6
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 4.4e-174 615.5 577 54.2
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 9.8e-174 614.4 577 54.2
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 6.4e-173 611.7 582 52.7
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 8.3e-173 611.3 595 53.9
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.1e-172 610.9 582 52.9
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.9e-172 610.1 578 52.2
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 4.1e-172 609.0 568 53.0
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 7.0e-172 608.2 578 52.1
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 9.2e-172 607.8 578 51.9
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 1.6e-171 607.1 590 53.2
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 2.7e-171 606.3 604 51.8
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 2.7e-171 606.3 578 52.1
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.6e-171 605.5 578 51.9
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 7.8e-171 604.7 577 51.8
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 2.3e-170 603.2 580 54.7
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 3.0e-170 602.8 578 51.6
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 3.9e-170 602.4 594 52.4
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 1.1e-169 600.9 583 52.0
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 3.6e-168 595.9 587 51.8
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 3.4e-166 589.3 591 51.4
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 9.9e-166 587.8 577 52.5
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.4e-164 583.2 593 50.1
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 5.4e-164 582.0 531 55.2
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 6.0e-163 578.6 584 53.3
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 7.8e-163 578.2 593 49.4
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 3.9e-162 575.9 535 55.0
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 7.3e-161 571.6 580 50.9
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.6e-160 570.5 586 50.9
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 1.4e-159 567.4 572 50.7
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 4.0e-159 565.8 589 52.6
CAN.G481.56 Capsicum annuum HOM05D004333 ORTHO05D005363 1.5e-158 563.9 535 53.8
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 1.4e-156 557.4 573 50.6
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 4.2e-156 555.8 578 50.7
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 5.4e-156 555.4 574 51.2
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 5.1e-154 548.9 583 48.7
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 5.1e-154 548.9 576 48.8
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 1.2e-152 544.3 506 55.3
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 1.6e-152 543.9 580 50.3
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 3.6e-152 542.7 576 48.4
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 3.1e-151 539.7 578 48.8
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 4.0e-151 539.3 580 47.4
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 2.6e-150 536.6 579 46.8
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 7.6e-150 535.0 601 47.3
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 9.9e-150 534.6 578 48.1
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 9.9e-150 534.6 578 48.1
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 1.3e-149 534.3 577 47.5
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 1.3e-149 534.3 575 48.0
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 1.7e-149 533.9 580 48.4
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 1.7e-149 533.9 580 47.9
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 4.9e-149 532.3 578 48.1
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.9e-148 530.4 579 47.5
Carub.0006s2217 Capsella rubella HOM05D004333 ORTHO05D005363 2.4e-148 530.0 580 48.3
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 1.6e-147 527.3 578 47.8
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 1.6e-147 527.3 589 47.7
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 2.7e-147 526.6 578 47.8
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 4.6e-147 525.8 580 47.2
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 4.6e-147 525.8 578 48.4
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 4.6e-147 525.8 580 47.9
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 4.6e-147 525.8 575 48.0
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 5.1e-146 522.3 576 48.6
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 6.6e-146 521.9 576 48.3
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 8.7e-146 521.5 580 46.9
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 1.1e-145 521.2 594 46.1
Aa31LG11G3970 Aethionema arabicum HOM05D004333 ORTHO05D005363 1.5e-145 520.8 584 47.4
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 3.3e-145 519.6 578 46.9
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 4.3e-145 519.2 580 47.6
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 4.8e-144 515.8 578 46.9
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 6.2e-144 515.4 592 46.6
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 1.4e-143 514.2 545 49.0
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 1.8e-143 513.8 571 47.1
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 4.0e-143 512.7 593 47.0
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 1.5e-142 510.8 579 47.0
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 1.5e-142 510.8 578 46.5
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 5.8e-142 508.8 579 47.2
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 9.9e-142 508.1 560 48.9
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.9e-140 503.8 572 46.3
VMungo1309G1648 Vigna mungo HOM05D004333 ORTHO05D005363 3.5e-139 499.6 577 46.3
Actinidia34248 Actinidia chinensis HOM05D004333 ORTHO05D005363 8.4e-133 478.4 407 58.0
CSS0044449 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 2.5e-129 466.8 472 52.1
CSS0041108 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 9.6e-129 464.9 472 51.3
CAN.G481.55 Capsicum annuum HOM05D004333 ORTHO05D005363 2.2e-101 374.0 384 50.3
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 7.2e-100 369.0 610 37.4
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 1.3e-96 358.2 580 37.2
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 5.3e-95 352.8 494 41.3
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 1.3e-88 331.6 523 35.0
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 1.2e-86 325.1 287 53.3
SHI08286 Sapria himalayana HOM05D004333 ORTHO05D005363 4.4e-73 280.0 332 46.4
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 3.3e-68 263.8 522 35.2
SEGI_10720 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 5.2e-66 256.5 479 34.4
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.7e-61 241.5 230 53.5
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 8.6e-53 212.6 549 29.9
CAN.G3762.1 Capsicum annuum HOM05D004333 ORTHO05D005363 5.8e-49 199.9 240 46.2
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 9.6e-44 182.6 203 47.3
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 3.4e-41 174.1 532 28.0
Nitab4.5_0004178g0040 Nicotiana tabacum HOM05D004333 ORTHO05D005363 3.3e-36 157.5 150 56.0
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 8.4e-32 142.9 211 40.8
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 3.2e-31 141.0 211 40.3
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 3.1e-26 124.4 464 24.8
Nitab4.5_0004178g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 4.0e-26 124.0 204 40.7
SHI08287 Sapria himalayana HOM05D004333 ORTHO05D005363 1.0e-21 109.4 150 44.7
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 8.7e-21 106.3 129 40.3
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 9.0e-18 96.3 64 73.4
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 8.7e-13 79.7 178 30.9
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 1.9e-12 78.6 96 40.6
ATR0697G222 Amborella trichopoda HOM05D004333 ORTHO05D038300 2.8e-11 74.7 104 39.4
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 1.5e-09 68.9 110 39.1
MCO09G360 Micromonas commoda HOM05D004333 ORTHO05D005363 4.5e-09 67.4 139 30.9
arahy.Tifrunner.gnm1.ann1.UK8Y7I Arachis hypogaea HOM05D004333 ORTHO05D005363 1.3e-08 65.9 129 34.1
Psat0ss3938g0040 Pisum sativum HOM05D001673 ORTHO05D000895 1.2e-06 59.3 39 71.8


User provided reference genes

Program Settings