Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 2.1e-88 328.9 162 100.0
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 7.6e-54 214.2 158 64.6
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 1.4e-52 209.9 124 76.6
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 2.1e-51 206.1 152 65.1
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.5e-49 199.1 124 71.8
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.3e-48 196.8 156 59.6
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 1.6e-48 196.4 121 72.7
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.1e-47 193.7 168 57.7
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.9e-47 191.0 109 78.0
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 3.4e-46 188.7 168 56.5
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 5.0e-45 184.9 155 56.1
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.9e-44 183.0 116 69.0
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 3.2e-44 182.2 114 71.9
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.2e-44 181.8 114 71.1
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 5.5e-44 181.4 113 72.6
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 7.2e-44 181.0 158 54.4
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 9.4e-44 180.6 113 70.8
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.2e-43 180.3 121 66.9
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.6e-43 179.9 156 55.8
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.6e-43 178.7 141 57.4
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 6.1e-43 177.9 162 54.3
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.0e-42 177.2 112 67.9
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.4e-42 176.8 108 70.4
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.8e-42 176.4 106 72.6
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.0e-42 175.6 157 58.0
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 3.0e-42 175.6 158 55.1
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.0e-42 175.6 158 55.1
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 3.0e-42 175.6 163 54.6
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 3.9e-42 175.3 164 51.8
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.1e-42 174.9 151 57.6
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.1e-41 173.7 162 54.3
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.5e-41 173.3 117 65.8
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 2.0e-41 172.9 115 67.0
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.3e-41 171.8 129 62.8
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 1.7e-40 169.9 122 64.8
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.8e-40 169.1 129 62.0
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.8e-40 169.1 158 53.2
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 4.8e-40 168.3 148 55.4
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 4.8e-40 168.3 124 62.9
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 6.3e-40 167.9 122 63.9
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.1e-39 167.2 107 68.2
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 9.1e-39 164.1 125 58.4
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.6e-38 162.5 95 72.6
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 3.4e-38 162.2 152 58.6
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 3.4e-38 162.2 125 58.4
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 4.5e-38 161.8 111 64.0
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 5.9e-38 161.4 124 60.5
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 5.9e-38 161.4 120 59.2
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 7.7e-38 161.0 113 61.9
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 1.7e-37 159.8 88 90.9
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.4e-36 156.8 165 50.3
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.4e-36 156.8 165 50.3
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.2e-36 155.2 103 67.0
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 5.5e-36 154.8 116 58.6
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.1e-35 152.9 147 49.7
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 7.9e-35 151.0 111 61.3
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.3e-34 149.4 204 39.7
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 6.7e-34 147.9 94 70.2
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 9.7e-33 144.1 171 47.4
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 9.7e-33 144.1 155 48.4
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 1.3e-32 143.7 107 57.9
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.7e-32 143.3 122 54.1
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 4.8e-32 141.7 105 60.0
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 6.3e-32 141.4 143 46.9
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 6.3e-32 141.4 155 46.5
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.1e-31 140.6 128 53.9
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.1e-31 140.6 227 35.7
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 3.1e-31 139.0 110 52.7
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 4.1e-31 138.7 105 58.1
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 4.1e-31 138.7 107 57.9
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 5.3e-31 138.3 120 52.5
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 7.0e-31 137.9 108 52.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 7.0e-31 137.9 154 45.5
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 7.0e-31 137.9 125 52.0
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 9.1e-31 137.5 105 57.1
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 9.1e-31 137.5 105 57.1
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 2.0e-30 136.3 166 41.6
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.0e-30 136.3 127 50.4
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.6e-30 136.0 105 57.1
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 4.5e-30 135.2 119 52.9
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.5e-30 135.2 122 48.4
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 4.5e-30 135.2 112 52.7
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 5.9e-30 134.8 138 48.6
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 5.9e-30 134.8 117 52.1
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 7.7e-30 134.4 104 57.7
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 7.7e-30 134.4 148 45.3
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.0e-29 134.0 117 53.0
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.0e-29 134.0 107 52.3
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.3e-29 133.7 125 49.6
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.3e-29 133.7 105 53.3
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 1.3e-29 133.7 156 44.9
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.7e-29 133.3 107 54.2
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 1.7e-29 133.3 149 45.6
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.7e-29 133.3 130 48.5
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.2e-29 132.9 117 51.3
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 2.2e-29 132.9 107 53.3
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 2.9e-29 132.5 169 43.2
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 2.9e-29 132.5 105 55.2
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.9e-29 132.5 107 55.1
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 2.9e-29 132.5 125 49.6
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 3.8e-29 132.1 111 55.0
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 3.8e-29 132.1 111 55.0
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.8e-29 132.1 121 48.8
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.8e-29 132.1 105 54.3
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.8e-29 132.1 117 51.3
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 3.8e-29 132.1 105 55.2
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 3.8e-29 132.1 107 54.2
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 3.8e-29 132.1 107 54.2
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 5.0e-29 131.7 106 54.7
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 5.0e-29 131.7 105 53.3
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 6.5e-29 131.3 105 55.2
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 6.5e-29 131.3 107 54.2
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 6.5e-29 131.3 107 54.2
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 6.5e-29 131.3 114 52.6
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 6.5e-29 131.3 116 52.6
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 8.5e-29 131.0 105 55.2
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 8.5e-29 131.0 156 43.6
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 8.5e-29 131.0 155 42.6
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.5e-28 130.2 105 53.3
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 1.5e-28 130.2 116 51.7
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.9e-28 129.8 105 55.2
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.9e-28 129.8 119 49.6
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 2.5e-28 129.4 157 40.1
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.5e-28 129.4 121 50.4
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 3.2e-28 129.0 145 42.8
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 3.2e-28 129.0 145 42.8
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 3.2e-28 129.0 145 42.8
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 3.2e-28 129.0 105 55.2
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 4.2e-28 128.6 127 48.0
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.2e-28 128.6 105 54.3
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 5.5e-28 128.3 134 47.8
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 7.2e-28 127.9 128 46.9
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 7.2e-28 127.9 128 46.9
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 7.2e-28 127.9 105 54.3
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 9.4e-28 127.5 112 55.4
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 9.4e-28 127.5 105 54.3
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 9.4e-28 127.5 161 42.2
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 9.4e-28 127.5 117 49.6
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 9.4e-28 127.5 117 50.4
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.2e-27 127.1 105 53.3
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.2e-27 127.1 105 53.3
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.2e-27 127.1 137 46.7
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 1.6e-27 126.7 128 46.9
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 1.6e-27 126.7 105 53.3
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 2.1e-27 126.3 169 39.6
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 2.7e-27 125.9 105 53.3
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.6e-27 125.6 106 53.8
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 3.6e-27 125.6 121 49.6
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 4.7e-27 125.2 107 53.3
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.7e-27 125.2 105 53.3
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.7e-27 125.2 102 55.9
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.4e-26 123.6 105 53.3
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 5.2e-26 121.7 115 49.6
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 5.2e-26 121.7 151 45.0
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 8.8e-26 120.9 100 52.0
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 8.8e-26 120.9 105 50.5
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 3.3e-25 119.0 146 41.8
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 1.7e-24 116.7 160 40.0
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 5.3e-23 111.7 63 73.0
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 5.9e-22 108.2 93 52.7
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 7.7e-22 107.8 153 40.5
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 1.5e-20 103.6 108 46.3
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.5e-20 103.6 108 46.3
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.9e-20 103.2 78 60.3
CSS0019058 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.3e-16 90.5 117 45.3
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 2.8e-16 89.4 60 58.3
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.8e-16 88.6 58 60.3
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 6.3e-16 88.2 58 60.3
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 1.6e-14 83.6 64 64.1
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 5.9e-14 81.6 108 47.2
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.0e-13 80.9 98 46.9
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 2.2e-13 79.7 52 55.8
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 5.0e-13 78.6 100 38.0
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 3.2e-12 75.9 52 65.4
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 1.6e-11 73.6 102 42.2
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 4.0e-10 68.9 98 42.9
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.2e-09 67.4 71 45.1
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 1.7e-08 63.5 54 57.4
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 2.2e-08 63.2 103 35.9
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 6.3e-08 61.6 95 32.6
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 2.4e-07 59.7 52 48.1
TPR.G36109 Trifolium pratense HOM05D003884 ORTHO05D004482 4.5e-06 55.5 63 39.7
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 7.7e-06 54.7 54 42.6


User provided reference genes

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