Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 1.3e-180 636.3 332 100.0
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 1.3e-148 530.0 332 83.1
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 1.9e-144 516.2 335 80.0
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.9e-144 516.2 336 79.2
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 1.4e-142 510.0 329 79.0
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 4.0e-142 508.4 332 78.6
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 5.2e-142 508.1 332 78.3
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.2e-141 506.9 338 78.7
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 3.4e-141 505.4 331 78.9
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 7.6e-141 504.2 332 78.9
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 2.2e-140 502.7 332 81.0
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 4.9e-140 501.5 336 77.7
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.2e-139 498.8 329 77.2
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 1.6e-138 496.5 335 76.7
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 6.0e-138 494.6 329 76.9
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.3e-137 493.4 320 79.1
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 1.7e-137 493.0 331 76.7
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 1.7e-137 493.0 331 76.7
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 3.9e-137 491.9 330 76.7
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 5.1e-137 491.5 336 74.7
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 7.3e-136 487.6 340 75.6
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 7.3e-136 487.6 335 76.4
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 9.6e-136 487.3 336 75.6
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.1e-135 486.1 333 75.1
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.8e-135 485.7 334 76.3
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 3.6e-135 485.3 323 76.8
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 1.1e-134 483.8 327 75.8
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 3.1e-134 482.3 329 75.1
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 4.0e-134 481.9 327 75.5
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 6.9e-134 481.1 337 75.4
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.5e-133 479.9 327 75.8
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 2.6e-133 479.2 330 75.2
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 5.8e-133 478.0 338 74.3
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 1.4e-131 473.4 327 75.8
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 3.2e-131 472.2 329 75.1
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 3.2e-131 472.2 329 75.1
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 4.2e-131 471.9 335 73.7
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 5.4e-131 471.5 337 73.0
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 5.4e-131 471.5 340 73.2
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 7.1e-131 471.1 327 75.2
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 1.2e-130 470.3 327 75.2
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 1.2e-130 470.3 343 73.8
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 1.6e-130 469.9 330 73.9
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 2.7e-130 469.2 329 74.8
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 2.7e-130 469.2 330 73.6
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 3.5e-130 468.8 326 75.8
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 6.0e-130 468.0 333 73.6
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 6.0e-130 468.0 329 75.1
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 6.0e-130 468.0 327 74.6
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 6.0e-130 468.0 329 73.9
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 6.0e-130 468.0 327 74.9
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 2.3e-129 466.1 327 74.6
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 3.0e-129 465.7 327 74.6
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.5e-128 463.4 325 74.8
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 1.9e-128 463.0 336 73.2
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 3.3e-128 462.2 337 72.1
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.3e-127 460.3 331 75.2
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.6e-127 459.9 337 73.3
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 2.8e-127 459.1 335 72.5
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 2.8e-127 459.1 313 76.0
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 8.1e-127 457.6 326 74.2
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.4e-126 456.8 335 73.4
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 2.4e-126 456.1 329 72.0
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 5.3e-126 454.9 340 71.8
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 5.3e-126 454.9 346 70.5
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 6.9e-126 454.5 330 71.8
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 9.0e-126 454.1 344 72.4
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 9.0e-126 454.1 370 68.9
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.5e-125 453.4 329 71.4
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.4e-125 452.2 320 74.4
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 2.2e-124 449.5 337 71.8
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 2.2e-124 449.5 337 72.7
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 3.8e-124 448.7 356 69.9
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.4e-123 446.8 331 71.0
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 2.4e-123 446.0 363 67.2
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 2.1e-122 443.0 332 69.0
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 2.7e-122 442.6 365 67.1
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 3.5e-122 442.2 318 73.9
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 7.9e-122 441.0 274 82.1
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 1.0e-121 440.7 332 72.0
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 5.1e-121 438.3 332 71.4
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 5.1e-121 438.3 307 73.9
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 8.7e-121 437.6 302 75.5
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 2.5e-120 436.0 339 68.4
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 3.3e-120 435.6 318 72.3
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 3.3e-120 435.6 358 66.8
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 3.3e-120 435.6 311 73.0
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 5.6e-120 434.9 365 66.6
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.3e-119 433.7 337 70.0
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 6.9e-118 427.9 406 61.1
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 1.6e-114 416.8 293 75.1
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 3.5e-114 415.6 303 73.9
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.8e-113 413.3 276 78.6
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 2.2e-111 406.4 328 66.2
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 8.2e-111 404.4 342 63.2
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 4.1e-110 402.1 322 66.8
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 2.6e-109 399.4 301 70.4
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 2.5e-107 392.9 245 82.0
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 1.0e-105 387.5 265 75.8
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 6.7e-105 384.8 333 64.3
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 1.7e-103 380.2 305 67.2
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 1.3e-100 370.5 300 64.3
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 4.2e-99 365.5 300 65.3
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 2.1e-98 363.2 274 69.7
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.8e-97 360.1 304 61.2
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.5e-96 357.1 236 80.9
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 3.7e-95 352.4 248 71.0
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 4.1e-94 349.0 211 84.4
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 8.5e-92 341.3 210 82.4
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 2.1e-90 336.7 323 55.4
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 2.6e-85 319.7 206 78.6
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 1.5e-83 313.9 232 72.0
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 1.5e-80 303.9 274 59.1
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 1.4e-73 280.8 196 75.0
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 7.5e-72 275.0 206 69.4
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 2.7e-69 266.5 169 80.5
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 5.0e-68 262.3 195 72.8
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 2.8e-66 256.5 305 46.2
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 2.0e-48 197.2 282 42.2
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.3e-47 194.5 148 70.3
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 6.0e-45 185.7 137 70.1
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 2.1e-34 150.6 223 45.3
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 6.8e-33 145.6 106 69.8
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 5.1e-28 129.4 97 72.2
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 1.2e-26 124.8 113 61.1
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 5.8e-24 115.9 90 64.4
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 7.6e-24 115.5 79 75.9
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.5e-21 106.7 118 55.9
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 2.3e-20 104.0 246 35.8
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 2.5e-19 100.5 91 61.5
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.3e-19 100.1 62 83.9
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-18 98.2 61 78.7
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-18 98.2 62 79.0
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.1e-18 97.4 62 80.6
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.8e-16 89.4 56 80.4
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 7.6e-16 89.0 55 81.8
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 3.2e-14 83.6 113 44.2
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 7.1e-14 82.4 81 49.4
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 1.2e-13 81.6 82 48.8
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 2.8e-10 70.5 79 49.4
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 1.4e-09 68.2 48 64.6
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 3.1e-09 67.0 90 44.4
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 1.5e-08 64.7 40 75.0
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 2.0e-08 64.3 37 78.4
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 2.6e-08 63.9 40 82.5
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 4.9e-07 59.7 122 34.4
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 3.2e-06 57.0 69 49.3


User provided reference genes

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