Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 0.0e+00 1279.2 675 100.0
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 0.0e+00 1182.2 675 94.1
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 1.9e-308 1062.0 677 85.4
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 1.3e-253 879.8 678 70.8
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 5.7e-244 847.8 700 65.4
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 9.1e-242 840.5 685 70.7
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 7.7e-241 837.4 690 70.1
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 8.2e-235 817.4 690 69.3
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.0e-232 808.1 690 69.0
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 2.5e-231 805.8 691 69.8
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 9.4e-231 803.9 691 69.6
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 1.2e-230 803.5 691 69.6
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 4.7e-230 801.6 688 69.8
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 8.0e-230 800.8 684 65.4
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 4.0e-229 798.5 694 69.7
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 5.7e-228 794.7 692 68.2
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.8e-227 791.6 691 70.0
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 6.3e-227 791.2 692 66.8
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 3.8e-224 781.9 694 64.6
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 3.6e-222 775.4 694 62.2
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 3.4e-220 768.8 697 66.3
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 2.2e-219 766.1 709 63.3
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.8e-219 765.0 689 64.7
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 7.7e-217 757.7 703 61.3
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 2.2e-216 756.1 694 61.4
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 2.7e-214 749.2 680 61.5
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 8.0e-214 747.7 693 60.5
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 8.8e-213 744.2 694 61.5
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 1.1e-210 737.3 725 61.1
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 9.2e-210 734.2 694 61.1
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 1.2e-209 733.8 695 63.2
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 1.2e-209 733.8 693 59.3
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 1.3e-208 730.3 696 63.9
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 5.0e-208 728.4 691 60.3
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 5.0e-208 728.4 694 60.1
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 2.1e-206 723.0 701 60.1
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 8.0e-206 721.1 685 64.5
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 5.2e-205 718.4 696 60.3
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 1.8e-202 709.9 704 57.4
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 4.1e-202 708.8 694 60.7
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 2.7e-201 706.1 682 62.5
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 6.6e-200 701.4 713 56.9
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 7.3e-199 698.0 690 59.1
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 8.0e-198 694.5 715 56.2
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.4e-197 693.7 700 56.9
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 4.0e-197 692.2 683 58.7
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 1.5e-196 690.3 685 60.4
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 2.0e-196 689.9 714 55.6
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 4.4e-196 688.7 712 55.6
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 5.8e-196 688.3 700 56.3
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.8e-196 688.3 741 60.5
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.3e-195 687.2 699 59.5
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 3.7e-195 685.6 696 56.8
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 4.9e-195 685.3 709 56.3
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 7.0e-194 681.4 711 56.8
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.3e-192 677.2 706 56.1
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 6.6e-192 674.9 714 56.3
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 8.6e-192 674.5 689 59.4
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.6e-190 670.2 650 58.9
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 8.1e-190 667.9 692 58.8
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 1.4e-189 667.2 708 56.1
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 1.5e-188 663.7 650 60.3
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 7.5e-188 661.4 656 61.0
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 3.7e-187 659.1 702 55.3
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.4e-186 656.4 708 55.4
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 9.2e-186 654.4 706 55.2
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 6.6e-184 648.3 699 54.8
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.6e-182 643.7 680 61.6
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 8.1e-182 641.3 704 54.5
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 1.1e-181 641.0 715 56.8
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 1.2e-180 637.5 740 52.8
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 3.4e-180 636.0 688 58.9
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 5.8e-180 635.2 688 59.2
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 7.6e-180 634.8 701 53.9
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 7.6e-180 634.8 687 60.0
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 2.2e-179 633.3 702 55.8
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 6.4e-179 631.7 606 58.6
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 8.4e-179 631.3 698 53.4
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 7.8e-177 624.8 716 56.0
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 8.6e-176 621.3 688 52.9
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 3.3e-175 619.4 685 56.8
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 2.1e-174 616.7 687 53.6
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 1.4e-173 614.0 695 53.2
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 9.3e-170 601.3 714 52.2
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 1.6e-169 600.5 710 53.2
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 7.8e-169 598.2 514 60.9
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 1.7e-168 597.0 702 54.7
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 6.6e-168 595.1 687 52.3
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 6.2e-166 588.6 681 53.5
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 8.1e-166 588.2 681 53.3
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 5.8e-164 582.0 557 60.3
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 3.8e-163 579.3 681 52.7
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 1.4e-162 577.4 705 49.1
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 1.9e-162 577.0 630 56.2
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 9.3e-162 574.7 715 51.0
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 7.9e-161 571.6 728 51.0
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 3.3e-159 566.2 707 48.8
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 2.2e-155 553.5 727 50.5
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 1.2e-153 547.7 552 56.3
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 3.5e-153 546.2 584 54.8
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 3.7e-150 536.2 570 52.8
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 8.1e-150 535.0 572 53.1
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.6e-148 530.0 561 54.5
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 2.6e-140 503.4 494 59.7
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 1.7e-139 500.7 561 54.7
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 5.5e-138 495.7 545 51.6
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 3.0e-136 490.0 543 51.9
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 2.5e-130 470.3 583 49.6
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 2.1e-129 467.2 432 63.9
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 1.8e-128 464.2 705 44.8
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 1.1e-109 401.7 352 62.5
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 2.5e-106 390.6 326 66.0
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 4.0e-104 383.3 316 63.9
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 3.7e-102 376.7 561 41.7
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 4.7e-97 359.8 385 52.2
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 8.0e-97 359.0 354 58.5
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 3.4e-95 353.6 351 62.4
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 5.7e-95 352.8 332 60.5
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.5e-82 311.6 804 32.2
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 1.9e-82 311.2 775 32.4
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 4.9e-78 296.6 361 50.4
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 1.7e-75 288.1 366 49.7
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 7.6e-63 246.1 280 53.2
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.6e-60 238.4 294 49.7
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 4.6e-60 236.9 354 44.9
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 9.3e-53 212.6 415 39.5
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-50 205.3 324 44.4
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 5.3e-48 196.8 179 57.0
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.5e-47 195.3 199 50.3
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 1.1e-45 189.1 143 69.2
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 4.0e-40 170.6 205 50.2
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.3e-38 165.6 127 69.3
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.6e-36 158.7 267 38.6
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 7.9e-28 129.8 134 57.5
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 3.1e-24 117.9 371 28.3
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 5.9e-23 113.6 141 49.6
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 3.8e-22 110.9 84 65.5
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 5.1e-19 100.5 79 68.4
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 4.1e-16 90.9 139 62.6


User provided reference genes

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