Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 2.7e-54 215.7 164 100.0
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 1.9e-36 156.4 167 69.5
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 8.4e-16 87.8 77 55.8
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 3.2e-15 85.9 71 59.2
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 4.2e-15 85.5 72 56.9
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 5.4e-15 85.1 72 56.9
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 7.1e-15 84.7 72 55.6
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 9.2e-15 84.3 77 57.1
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 1.6e-14 83.6 75 58.7
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 3.5e-14 82.4 72 61.1
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 4.6e-14 82.0 81 58.0
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 6.0e-14 81.6 78 56.4
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 6.0e-14 81.6 76 51.3
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 7.8e-14 81.3 76 59.2
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 1.0e-13 80.9 166 50.6
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 1.3e-13 80.5 72 54.2
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.3e-13 80.5 76 56.6
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 2.3e-13 79.7 73 56.2
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 2.3e-13 79.7 71 57.7
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 2.3e-13 79.7 52 71.2
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 3.0e-13 79.3 73 50.7
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 3.9e-13 79.0 76 53.9
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 3.9e-13 79.0 162 42.0
Lalb_Chr14g0374691 Lupinus albus HOM05D004188 ORTHO05D004445 5.1e-13 78.6 69 63.8
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 5.1e-13 78.6 51 70.6
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 5.1e-13 78.6 57 71.9
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 5.1e-13 78.6 164 48.8
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 6.6e-13 78.2 72 56.9
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 1.1e-12 77.4 71 59.2
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 1.1e-12 77.4 71 54.9
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 1.9e-12 76.6 60 65.0
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.9e-12 76.6 75 50.7
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 1.9e-12 76.6 71 57.7
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 2.5e-12 76.3 78 53.8
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 2.5e-12 76.3 182 52.2
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.5e-12 76.3 80 50.0
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 3.3e-12 75.9 59 57.6
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 3.3e-12 75.9 74 56.8
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 3.3e-12 75.9 74 56.8
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 3.3e-12 75.9 74 56.8
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 3.3e-12 75.9 74 56.8
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 3.3e-12 75.9 67 52.2
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 3.3e-12 75.9 77 51.9
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 4.3e-12 75.5 69 52.2
Migut.D02278 Erythranthe guttata HOM05D004188 ORTHO05D004445 4.3e-12 75.5 75 53.3
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 4.3e-12 75.5 72 54.2
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 5.6e-12 75.1 57 68.4
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 5.6e-12 75.1 57 68.4
Migut.D02222 Erythranthe guttata HOM05D004188 ORTHO05D004445 5.6e-12 75.1 75 53.3
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 5.6e-12 75.1 77 54.5
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 7.3e-12 74.7 60 63.3
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 7.3e-12 74.7 77 48.1
TWI31G0432 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 7.3e-12 74.7 76 55.3
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 9.6e-12 74.3 77 51.9
Peaxi162Scf00092g00152 Petunia axillaris HOM05D004188 ORTHO05D004445 9.6e-12 74.3 77 49.4
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.2e-11 73.9 60 63.3
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 1.6e-11 73.6 73 56.2
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.6e-11 73.6 68 54.4
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 1.6e-11 73.6 71 52.1
Ca_01416_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 2.1e-11 73.2 77 49.4
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 2.1e-11 73.2 86 47.7
Medtr2g094170 Medicago truncatula HOM05D004188 ORTHO05D004445 2.1e-11 73.2 77 45.5
Rhsim13G0094200 Rhododendron simsii HOM05D004188 ORTHO05D004445 2.1e-11 73.2 57 59.6
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 2.1e-11 73.2 60 61.7
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 2.8e-11 72.8 69 56.5
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 2.8e-11 72.8 64 59.4
Lalb_Chr22g0350231 Lupinus albus HOM05D004188 ORTHO05D004445 2.8e-11 72.8 71 57.7
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 3.6e-11 72.4 60 60.0
Lj3g0014225 Lotus japonicus HOM05D004188 ORTHO05D004445 3.6e-11 72.4 70 55.7
TAR629G0463 Trochodendron aralioides HOM05D004188 ORTHO05D004445 3.6e-11 72.4 78 50.0
Dinv32748 Davidia involucrata HOM05D004188 ORTHO05D004445 4.7e-11 72.0 65 53.8
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 4.7e-11 72.0 70 52.9
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 6.2e-11 71.6 69 55.1
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 6.2e-11 71.6 60 58.3
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 8.1e-11 71.2 64 56.2
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 1.1e-10 70.9 59 59.3
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 1.1e-10 70.9 71 52.1
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 1.4e-10 70.5 69 52.2
Migut.N02602 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.4e-10 70.5 74 50.0
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.4e-10 70.5 51 66.7
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 1.8e-10 70.1 68 51.5
Solyc11g069390.1 Solanum lycopersicum HOM05D004188 ORTHO05D004445 1.8e-10 70.1 76 47.4
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 2.4e-10 69.7 51 66.7
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 3.1e-10 69.3 77 49.4
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 3.1e-10 69.3 75 49.3
unitig_736.g22415 Utricularia gibba HOM05D004188 ORTHO05D004445 5.2e-10 68.6 59 55.9
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 6.9e-10 68.2 68 48.5
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 6.9e-10 68.2 71 56.3
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 6.9e-10 68.2 72 51.4
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 6.9e-10 68.2 72 51.4
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.2e-09 67.4 72 54.2
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 1.2e-09 67.4 81 46.9
Sopen11g028110 Solanum pennellii HOM05D004188 ORTHO05D004445 1.2e-09 67.4 76 46.1
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 2.6e-09 66.2 71 53.5
CsaV3_1G012810 Cucumis sativus L. HOM05D004188 ORTHO05D004445 2.6e-09 66.2 54 61.1
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 4.4e-09 65.5 69 49.3
Lalb_Chr03g0027321 Lupinus albus HOM05D004188 ORTHO05D004445 5.8e-09 65.1 59 59.3
Sc06g0010170 Simmondsia chinensis HOM05D004188 ORTHO05D004445 5.8e-09 65.1 55 60.0
Nitab4.5_0012712g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 7.6e-09 64.7 63 50.8
Psat5g278280 Pisum sativum HOM05D004188 ORTHO05D004445 7.6e-09 64.7 77 42.9
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 7.6e-09 64.7 70 51.4
TPR.G11601 Trifolium pratense HOM05D004188 ORTHO05D004445 7.6e-09 64.7 77 45.5
VMungo1080G0149 Vigna mungo HOM05D004188 ORTHO05D004445 7.6e-09 64.7 72 51.4
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 1.3e-08 63.9 72 48.6
Ah.01g014350 Amaranthus hybridus HOM05D004188 ORTHO05D004445 1.7e-08 63.5 57 52.6
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 2.2e-08 63.2 70 45.7
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 2.9e-08 62.8 51 60.8
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 2.9e-08 62.8 51 60.8
HanXRQChr13g0403511 Helianthus annuus HOM05D004188 ORTHO05D004445 2.9e-08 62.8 43 67.4
ECA248G2476 Erigeron canadensis HOM05D004188 ORTHO05D004445 4.9e-08 62.0 78 44.9
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 8.4e-08 61.2 48 58.3
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 8.4e-08 61.2 69 47.8
PSO063G5002 Papaver somniferum HOM05D011190 ORTHO05D004445 8.4e-08 61.2 74 48.6
PSO339G4510 Papaver somniferum HOM05D011190 ORTHO05D004445 8.4e-08 61.2 74 48.6
Atru.chr3.3633 Acer truncatum HOM05D004188 ORTHO05D004445 1.9e-07 60.1 73 47.9
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 1.9e-07 60.1 53 54.7
Aa31LG4G14540 Aethionema arabicum HOM05D004188 ORTHO05D004445 1.9e-07 60.1 60 51.7
Thecc.09G340200 Theobroma cacao HOM05D004188 ORTHO05D004445 1.9e-07 60.1 77 42.9
unitig_699.g19195 Utricularia gibba HOM05D004188 ORTHO05D004445 1.9e-07 60.1 44 63.6
Prupe.2G214100 Prunus persica HOM05D004188 ORTHO05D004445 2.4e-07 59.7 53 54.7
TWI79G1650 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 3.2e-07 59.3 40 67.5
Gohir.A05G102500 Gossypium hirsutum HOM05D004188 ORTHO05D004445 4.2e-07 58.9 81 42.0
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 4.2e-07 58.9 76 44.7
CiPaw.13G112700 Carya illinoinensis HOM05D004188 ORTHO05D004445 5.4e-07 58.5 77 44.2
Mapoly0127s0007 Marchantia polymorpha HOM05D004188 ORTHO05D004445 7.1e-07 58.2 57 54.4
PGR119G2389 Punica granatum HOM05D015476 ORTHO05D004445 7.1e-07 58.2 71 43.7
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea HOM05D004188 ORTHO05D004445 9.3e-07 57.8 47 57.4
C03p12760 Brassica napus HOM05D004188 ORTHO05D004445 1.2e-06 57.4 73 45.2
Phvul.005G135700 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 1.6e-06 57.0 63 49.2
MSTRG.17805 Avicennia marina HOM05D004188 ORTHO05D004445 2.1e-06 56.6 71 43.7
BraA10t43861Z Brassica rapa HOM05D004188 ORTHO05D004445 2.1e-06 56.6 70 48.6
THA.LOC104810856 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 2.1e-06 56.6 67 43.3
DCAR_006440 Daucus carota HOM05D004188 ORTHO05D004445 3.5e-06 55.8 49 53.1
PSO339G1636 Papaver somniferum HOM05D004188 ORTHO05D004445 4.6e-06 55.5 73 41.1
HPP92_008764 Vanilla planifolia HOM05D004188 ORTHO05D004445 4.6e-06 55.5 84 38.1
A10p17820 Brassica napus HOM05D004188 ORTHO05D004445 6.0e-06 55.1 70 47.1
BolC3t13742H Brassica oleracea HOM05D004188 ORTHO05D004445 6.0e-06 55.1 73 45.2
HPP92_005145 Vanilla planifolia HOM05D053319 ORTHO05D004445 6.0e-06 55.1 77 39.0
BcaB08g36360 Brassica carinata HOM05D004188 ORTHO05D004445 7.8e-06 54.7 70 48.6
PSO384G1281 Papaver somniferum HOM05D004188 ORTHO05D004445 7.8e-06 54.7 40 60.0


User provided reference genes

Program Settings