Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 1.9e-237 825.5 415 100.0
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 8.2e-185 650.6 415 79.3
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 2.7e-180 635.6 415 77.3
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 3.0e-179 632.1 412 76.7
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 1.1e-176 623.6 408 76.7
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 2.0e-175 619.4 402 77.4
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 3.4e-175 618.6 414 75.6
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 1.0e-174 617.1 414 74.9
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 3.8e-174 615.1 413 75.1
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 5.0e-174 614.8 413 75.3
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 8.5e-174 614.0 414 74.9
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 8.5e-174 614.0 414 74.9
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 1.1e-173 613.6 411 75.7
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 2.5e-173 612.5 413 74.8
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 4.2e-173 611.7 407 76.2
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 1.2e-172 610.1 413 74.6
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.2e-172 610.1 413 74.6
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 2.1e-172 609.4 428 73.1
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 2.7e-172 609.0 414 74.4
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 4.7e-172 608.2 406 75.9
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 6.1e-172 607.8 403 75.9
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 2.3e-171 605.9 412 74.0
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.1e-170 603.6 408 73.8
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 2.6e-170 602.4 401 74.8
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 3.3e-170 602.1 413 72.9
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 4.4e-170 601.7 402 74.4
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 5.7e-170 601.3 413 72.2
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 5.7e-170 601.3 413 72.9
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 7.4e-170 600.9 410 74.1
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 7.4e-170 600.9 413 72.9
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 1.3e-169 600.1 412 73.3
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 2.2e-169 599.4 412 73.3
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 2.2e-169 599.4 404 74.5
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 2.2e-169 599.4 406 73.2
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 2.8e-169 599.0 406 73.6
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 2.8e-169 599.0 413 72.2
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 4.8e-169 598.2 426 71.6
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 2.4e-168 595.9 413 72.2
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 9.1e-168 594.0 413 72.2
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 1.6e-167 593.2 412 73.8
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.6e-167 593.2 406 73.2
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 3.5e-167 592.0 412 71.8
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 1.3e-166 590.1 413 72.6
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 1.5e-165 586.6 402 73.4
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 1.5e-165 586.6 399 72.9
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 3.2e-165 585.5 404 72.3
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 9.4e-165 583.9 407 72.2
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 1.2e-164 583.6 409 72.1
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 1.6e-164 583.2 404 72.5
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 1.6e-164 583.2 406 72.4
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 6.7e-163 577.8 404 72.5
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 8.8e-163 577.4 415 70.1
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 1.1e-162 577.0 413 70.2
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 1.5e-162 576.6 424 68.4
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 1.4e-160 570.1 393 76.1
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 1.4e-160 570.1 393 76.1
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 1.4e-160 570.1 411 70.1
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.8e-160 569.7 413 69.2
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 4.1e-160 568.5 390 74.4
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 5.3e-160 568.2 396 72.5
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 5.3e-160 568.2 409 69.7
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.2e-159 567.0 406 70.7
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 1.3e-158 563.5 411 69.3
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 2.9e-158 562.4 406 69.2
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 7.2e-157 557.8 408 68.9
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 1.0e-155 553.9 396 71.0
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 1.0e-155 553.9 386 73.6
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 4.0e-155 552.0 414 69.3
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 3.4e-154 548.9 407 69.0
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 6.3e-153 544.7 400 69.5
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 8.3e-153 544.3 399 69.9
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 3.8e-150 535.4 412 65.0
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 5.0e-150 535.0 395 69.1
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 1.9e-149 533.1 398 66.8
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 5.5e-149 531.6 398 66.6
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 1.2e-148 530.4 397 67.3
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 4.7e-148 528.5 405 65.7
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 1.0e-147 527.3 398 66.6
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 1.4e-147 526.9 399 65.7
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 4.0e-147 525.4 398 66.3
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 8.8e-147 524.2 398 65.8
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 1.5e-146 523.5 398 65.3
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 4.4e-146 521.9 410 64.1
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 5.7e-146 521.5 403 64.8
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 1.3e-145 520.4 398 66.6
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 2.8e-145 519.2 402 66.4
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 1.1e-144 517.3 367 73.0
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 2.7e-143 512.7 375 70.4
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 6.1e-140 501.5 386 66.1
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 8.0e-140 501.1 400 63.8
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 6.4e-137 491.5 397 61.2
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 1.6e-135 486.9 355 69.9
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 7.8e-135 484.6 399 61.9
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 3.0e-134 482.6 406 59.6
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 7.3e-133 478.0 404 60.1
CiPaw.15G135000 Carya illinoinensis HOM05D004238 ORTHO05D004934 5.8e-130 468.4 328 71.6
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 5.8e-130 468.4 409 58.4
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 1.7e-129 466.8 401 57.9
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 5.4e-128 461.8 418 58.4
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 1.6e-127 460.3 398 58.3
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 2.7e-127 459.5 401 57.1
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 4.3e-125 452.2 410 56.3
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 3.2e-120 436.0 405 55.1
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 4.1e-120 435.6 403 55.1
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 4.1e-120 435.6 396 55.6
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 7.8e-119 431.4 403 57.3
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 2.5e-117 426.4 407 55.0
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 1.6e-116 423.7 382 59.2
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 1.5e-114 417.2 377 59.7
Gohir.A07G066800 Gossypium hirsutum HOM05D004238 ORTHO05D004934 4.4e-114 415.6 304 69.7
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 5.4e-112 408.7 388 55.2
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 3.6e-108 396.0 371 56.1
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 6.2e-108 395.2 376 55.6
Zm00001eb335570 Zea mays HOM05D004238 ORTHO05D004934 1.1e-107 394.4 262 73.3
Zm00001eb124820 Zea mays HOM05D004238 ORTHO05D004934 8.9e-107 391.3 259 73.7
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 9.9e-106 387.9 372 54.3
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 4.5e-98 362.5 393 51.9
CARHR093620 Cardamine hirsuta HOM05D004238 ORTHO05D004934 1.9e-93 347.1 228 71.9
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 7.4e-93 345.1 368 51.9
DCAR_000177 Daucus carota HOM05D004238 ORTHO05D004934 1.3e-92 344.4 225 74.2
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 9.0e-83 311.6 341 53.1
Nn2g15201 Nelumbo nucifera HOM05D004238 ORTHO05D004934 4.1e-75 286.2 201 73.6
TAR371G0419 Trochodendron aralioides HOM05D004238 ORTHO05D004934 4.5e-58 229.6 186 64.5
DCAR_011376 Daucus carota HOM05D004238 ORTHO05D004934 5.5e-56 222.6 207 56.0
PRCOL_00000826 Prasinoderma coloniale HOM05D004238 ORTHO05D004934 7.4e-53 212.2 355 37.2
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 5.2e-46 189.5 124 72.6
Sabra15G0040700 Salix brachista HOM05D004238 ORTHO05D004934 2.6e-45 187.2 173 53.2
Duzib205G0622 Durio zibethinus HOM05D004238 ORTHO05D004934 7.5e-45 185.7 225 48.4
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea HOM05D004238 ORTHO05D004934 2.0e-42 177.6 117 71.8
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea HOM05D004238 ORTHO05D004934 2.0e-42 177.6 126 67.5
DCAR_000092 Daucus carota HOM05D004238 ORTHO05D004934 2.7e-42 177.2 111 78.4
TPR.G26740 Trifolium pratense HOM05D004238 ORTHO05D004934 5.9e-42 176.0 109 78.0
Sed0014968 Sechium edule HOM05D004238 ORTHO05D004934 7.2e-40 169.1 117 71.8
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 4.0e-38 163.3 143 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis HOM05D004238 ORTHO05D004934 4.4e-37 159.8 176 49.4
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea HOM05D004238 ORTHO05D004934 4.4e-37 159.8 105 71.4
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 4.4e-37 159.8 174 45.4
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 2.8e-36 157.1 188 50.0
Atru.chr12.656 Acer truncatum HOM05D004238 ORTHO05D004934 1.8e-35 154.5 116 67.2
Atru.chr12.683 Acer truncatum HOM05D004238 ORTHO05D004934 1.6e-34 151.4 112 67.0
C05p38610 Brassica napus HOM05D004238 ORTHO05D004934 4.5e-26 123.2 162 48.1
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 7.3e-24 115.9 116 56.0
Pp3s30_460 Physcomitrium patens HOM05D019034 ORTHO05D004934 7.3e-24 115.9 350 25.1
Nn4g22334 Nelumbo nucifera HOM05D004238 ORTHO05D004934 9.5e-24 115.5 77 79.2
SEGI_36538 Sequoiadendron giganteum HOM05D004238 ORTHO05D004934 1.6e-23 114.8 115 53.0
Pp3s30_70 Physcomitrium patens HOM05D004238 ORTHO05D004934 8.0e-23 112.5 350 25.7
BolC5t32601H Brassica oleracea HOM05D004238 ORTHO05D004934 2.0e-21 107.8 149 45.6
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea HOM05D004238 ORTHO05D004934 1.8e-19 101.3 71 66.2
Psat0s1333g0160 Pisum sativum HOM05D004238 ORTHO05D004934 5.0e-17 93.2 102 52.9
Dinv00811 Davidia involucrata HOM05D004238 ORTHO05D004934 2.5e-16 90.9 141 41.1
Zm00001eb084840 Zea mays HOM05D004238 ORTHO05D004934 5.6e-16 89.7 73 63.0
BcaC08g44328 Brassica carinata HOM05D004238 ORTHO05D004934 9.5e-16 89.0 98 50.0
C06p17530 Brassica napus HOM05D004238 ORTHO05D004934 9.5e-16 89.0 98 50.0
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 1.2e-15 88.6 53 79.2
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 1.2e-15 88.6 116 47.4
Nn4g22335 Nelumbo nucifera HOM05D004238 ORTHO05D004934 2.8e-15 87.4 63 68.3
TAR374G1013 Trochodendron aralioides HOM05D001418 ORTHO05D002038 3.6e-15 87.0 101 48.5
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-14 84.3 67 58.2
Solyc08g045760.1 Solanum lycopersicum HOM05D004238 ORTHO05D004934 5.2e-14 83.2 66 63.6
Zm00001eb312660 Zea mays HOM05D004238 ORTHO05D004934 8.3e-12 75.9 76 52.6
BcaC04g23227 Brassica carinata HOM05D004238 ORTHO05D004934 2.4e-11 74.3 85 49.4
BcaC08g45100 Brassica carinata HOM05D004238 ORTHO05D004934 2.4e-11 74.3 85 49.4
BolC6t37880H Brassica oleracea HOM05D004238 ORTHO05D004934 2.4e-11 74.3 85 49.4
BolC9t53984H Brassica oleracea HOM05D004238 ORTHO05D004934 2.4e-11 74.3 85 49.4
Atru.chr12.682 Acer truncatum HOM05D004238 ORTHO05D004934 4.1e-11 73.6 88 51.1
BcaC06g36376 Brassica carinata HOM05D004238 ORTHO05D004934 1.6e-10 71.6 85 49.4
VMungo1127G1492 Vigna mungo HOM05D000769 ORTHO05D000598 2.7e-10 70.9 71 53.5
CiPaw.05G119100 Carya illinoinensis HOM05D003438 ORTHO05D004235 1.5e-08 65.1 387 25.8
BolC6t36947H Brassica oleracea HOM05D004238 ORTHO05D004934 2.1e-07 61.2 81 44.4
Lsat_1_v5_gn_4_21341 Lactuca sativa HOM05D003438 ORTHO05D004235 2.8e-07 60.8 325 26.8
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 3.6e-07 60.5 59 52.5
Pp3c9_10620 Physcomitrium patens HOM05D003438 ORTHO05D004235 6.2e-07 59.7 242 27.7
arahy.Tifrunner.gnm1.ann1.583R3C Arachis hypogaea HOM05D004238 ORTHO05D014893 8.1e-07 59.3 78 39.7
arahy.Tifrunner.gnm1.ann1.NZ4Q1A Arachis hypogaea HOM05D000129 ORTHO05D014893 1.1e-06 58.9 86 37.2


User provided reference genes

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