Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 0.0e+00 1114.0 556 100.0
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 3.2e-253 878.2 516 84.7
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 3.6e-236 821.6 516 78.1
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 4.0e-235 818.1 516 78.5
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 6.6e-230 800.8 516 76.0
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 8.6e-230 800.4 516 76.6
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 1.9e-229 799.3 516 76.0
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 4.3e-229 798.1 516 77.9
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 4.3e-229 798.1 530 75.3
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 7.3e-229 797.3 529 76.0
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 2.3e-227 792.3 516 76.6
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 1.2e-226 790.0 529 75.2
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.0e-226 789.3 516 76.2
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.0e-226 789.3 529 74.9
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 2.0e-226 789.3 516 76.6
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 3.7e-225 785.0 529 75.8
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 4.9e-225 784.6 515 75.7
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 1.4e-224 783.1 530 74.9
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 3.2e-224 781.9 529 74.7
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 5.9e-223 777.7 514 75.3
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 1.3e-222 776.5 517 74.9
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 2.3e-222 775.8 529 73.2
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 3.0e-222 775.4 529 73.7
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 6.6e-222 774.2 517 75.4
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 6.6e-222 774.2 516 74.2
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 1.5e-221 773.1 520 76.2
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 6.2e-220 767.7 529 73.3
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 6.2e-220 767.7 519 75.5
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 1.0e-219 766.9 516 74.6
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 1.8e-219 766.1 507 74.6
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 3.1e-219 765.4 519 75.3
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 4.0e-219 765.0 507 75.9
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 2.0e-218 762.7 559 69.6
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 4.4e-218 761.5 516 74.4
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 7.5e-218 760.8 516 73.6
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 1.3e-217 760.0 529 73.0
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 1.1e-216 756.9 516 74.0
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 1.1e-216 756.9 527 73.2
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 3.2e-216 755.4 519 74.4
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 4.1e-216 755.0 517 73.1
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 4.6e-215 751.5 531 72.5
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 4.6e-215 751.5 528 72.3
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 4.6e-215 751.5 511 73.2
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 6.6e-214 747.7 559 68.5
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.5e-213 746.5 522 71.6
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 1.5e-210 736.5 515 72.4
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 1.5e-210 736.5 515 72.4
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 1.5e-210 736.5 535 69.5
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 2.6e-210 735.7 515 72.0
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 4.4e-210 734.9 531 70.2
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 8.3e-209 730.7 506 72.9
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 4.1e-208 728.4 518 70.3
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 7.1e-208 727.6 509 71.3
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 8.6e-206 720.7 530 69.1
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 1.1e-205 720.3 516 69.2
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 1.9e-205 719.5 529 69.4
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 9.5e-205 717.2 514 69.5
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 2.1e-204 716.1 517 70.0
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 3.1e-203 712.2 547 65.8
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 3.1e-203 712.2 516 69.8
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.2e-202 710.3 488 73.4
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 2.0e-202 709.5 516 68.8
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 2.2e-201 706.1 532 68.2
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 8.4e-201 704.1 514 69.1
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 8.4e-201 704.1 548 65.9
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 2.7e-199 699.1 517 68.1
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 9.6e-197 690.6 470 74.3
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 4.0e-195 685.3 517 67.3
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 1.5e-194 683.3 517 66.9
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 2.6e-194 682.6 520 68.3
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 3.4e-194 682.2 517 66.7
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 1.7e-193 679.9 516 68.6
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 4.9e-193 678.3 516 66.7
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 3.2e-192 675.6 508 69.1
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 7.1e-192 674.5 517 65.6
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 7.1e-192 674.5 517 66.2
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.1e-191 672.9 517 65.4
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 3.5e-191 672.2 517 65.8
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 1.0e-190 670.6 515 65.8
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 1.7e-190 669.8 517 66.0
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.7e-190 669.8 505 68.3
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 3.0e-190 669.1 536 63.8
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 3.9e-190 668.7 526 64.6
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 5.1e-190 668.3 515 64.7
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 3.3e-189 665.6 529 64.3
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 3.3e-189 665.6 538 63.6
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 4.3e-189 665.2 515 65.0
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 7.3e-189 664.5 537 63.3
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 8.1e-188 661.0 506 65.4
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 2.4e-187 659.4 529 63.5
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 1.9e-184 649.8 516 63.6
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 2.4e-184 649.4 529 63.3
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 5.4e-184 648.3 514 62.8
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 9.3e-184 647.5 523 64.2
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 8.7e-182 641.0 517 60.5
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 3.6e-180 635.6 433 74.1
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 4.8e-180 635.2 530 62.6
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 4.0e-179 632.1 530 62.5
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 5.3e-179 631.7 516 62.4
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 6.9e-179 631.3 516 65.1
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 9.0e-179 630.9 530 62.5
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 2.0e-178 629.8 530 62.6
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 2.6e-178 629.4 515 64.5
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 1.3e-174 617.1 529 61.1
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 3.1e-171 605.9 450 68.2
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 1.7e-169 600.1 519 60.5
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 3.8e-169 599.0 444 70.3
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 5.0e-161 572.0 444 66.9
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 4.5e-154 548.9 500 58.6
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 2.6e-149 533.1 357 75.4
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 1.1e-139 501.1 398 63.1
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 1.2e-135 487.6 454 58.6
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 1.8e-131 473.8 512 49.0
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 7.0e-131 471.9 527 47.8
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 7.2e-120 435.3 390 58.7
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 1.0e-113 414.8 505 43.8
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 2.9e-108 396.7 472 45.6
Oeu059514.1 Olea europaea HOM05D005650 ORTHO05D007020 1.2e-106 391.3 470 49.4
Dinv00920 Davidia involucrata HOM05D005650 ORTHO05D007020 1.2e-61 241.9 139 81.3
DCAR_023531 Daucus carota HOM05D005650 ORTHO05D007020 2.8e-55 220.7 435 37.0
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 5.9e-45 186.4 123 74.0
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 1.2e-37 162.2 137 62.0
CiPaw.05G157900 Carya illinoinensis HOM05D005650 ORTHO05D007020 2.0e-29 134.8 79 78.5
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 1.3e-28 132.1 291 35.1
CBR_g31091 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-24 118.6 139 43.2
MELO3C019077.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.4e-22 112.1 72 73.6
Lsat_1_v5_gn_2_121941 Lactuca sativa HOM05D005650 ORTHO05D007020 2.4e-22 111.3 78 66.7
C06p32890 Brassica napus HOM05D005650 ORTHO05D007020 4.1e-22 110.5 104 56.7
Lsat_1_v5_gn_7_69840 Lactuca sativa HOM05D005650 ORTHO05D007020 5.9e-21 106.7 73 68.5
Lsat_1_v5_gn_1_123601 Lactuca sativa HOM05D005650 ORTHO05D007020 5.0e-20 103.6 99 51.5
Cre07.g327000 Chlamydomonas reinhardtii HOM05D005650 ORTHO05D007020 1.2e-13 82.4 291 25.4
CBR_g31097 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-10 71.6 53 56.6
Actinidia18430 Actinidia chinensis HOM05D020173 ORTHO05D007020 1.7e-07 62.0 69 47.8
BolC6t38409H Brassica oleracea HOM05D005650 ORTHO05D007020 4.8e-07 60.5 81 45.7
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 1.4e-06 58.9 40 72.5


User provided reference genes

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