Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.9e-267 925.2 464 100.0
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 1.1e-134 484.2 392 61.7
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.8e-133 479.6 399 57.9
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 9.0e-132 474.6 397 60.2
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 1.0e-127 461.1 387 58.1
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 5.1e-127 458.8 395 57.5
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 1.5e-126 457.2 393 58.3
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.5e-126 457.2 388 59.0
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.4e-124 450.7 394 57.4
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 1.4e-124 450.7 389 56.3
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.1e-124 449.5 427 53.6
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 3.1e-124 449.5 395 57.0
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 3.4e-123 446.0 423 53.9
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 5.8e-123 445.3 397 55.9
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 6.5e-122 441.8 384 56.5
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 4.2e-121 439.1 396 55.6
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 4.6e-120 435.6 388 55.2
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 4.6e-120 435.6 388 54.6
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 7.4e-118 428.3 391 54.5
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 9.6e-118 427.9 497 46.5
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 2.8e-117 426.4 351 58.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 1.2e-115 421.0 388 54.6
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 2.2e-114 416.8 399 53.9
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 6.5e-114 415.2 395 53.9
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 2.7e-112 409.8 412 51.2
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 2.3e-111 406.8 394 52.3
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 6.7e-111 405.2 395 52.4
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 6.7e-111 405.2 398 51.8
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 8.7e-111 404.8 387 51.9
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 3.3e-110 402.9 399 51.4
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 4.3e-110 402.5 399 52.1
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 9.7e-110 401.4 363 54.0
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 1.1e-108 397.9 390 52.1
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 5.3e-108 395.6 390 51.5
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 6.9e-108 395.2 376 52.1
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 6.9e-108 395.2 347 55.3
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.6e-107 393.3 377 52.8
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 8.5e-106 388.3 391 49.6
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.9e-105 387.1 393 49.9
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 2.5e-105 386.7 384 52.6
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 3.2e-105 386.3 395 50.9
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 4.2e-105 386.0 396 51.0
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 4.2e-105 386.0 399 50.4
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 4.6e-104 382.5 441 47.6
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 3.3e-102 376.3 395 50.4
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 5.7e-102 375.6 390 50.5
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 5.7e-102 375.6 397 49.9
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 1.7e-101 374.0 409 46.9
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 3.7e-101 372.9 402 50.5
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 8.2e-101 371.7 409 47.7
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.1e-100 371.3 402 48.5
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 1.1e-100 371.3 389 49.1
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 1.4e-100 370.9 393 49.6
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 3.1e-100 369.8 393 48.6
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 5.3e-100 369.0 389 50.1
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.3e-98 364.4 392 47.7
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 6.5e-98 362.1 393 47.8
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.9e-97 360.5 387 47.5
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 4.2e-97 359.4 432 46.8
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 5.5e-97 359.0 395 48.1
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 5.5e-97 359.0 387 47.5
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 7.2e-97 358.6 393 47.3
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 7.2e-97 358.6 388 46.9
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 1.6e-96 357.5 388 46.9
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 2.7e-96 356.7 283 62.9
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 4.7e-96 355.9 388 46.4
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 1.4e-95 354.4 393 47.3
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 7.4e-94 348.6 442 45.2
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 3.7e-93 346.3 381 47.2
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.8e-93 345.9 382 49.0
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.8e-93 345.9 382 48.4
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 2.4e-92 343.6 436 45.0
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 3.1e-92 343.2 382 48.4
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 4.1e-92 342.8 391 47.3
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 7.0e-92 342.0 349 51.0
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 9.1e-92 341.7 390 47.7
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 2.0e-91 340.5 395 47.8
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 5.9e-91 339.0 396 45.2
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 1.1e-89 334.7 357 49.6
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 7.2e-89 332.0 511 39.7
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 1.6e-88 330.9 398 45.2
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.1e-88 330.5 341 50.1
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 7.5e-86 322.0 342 50.3
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.3e-85 321.2 304 51.6
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 2.8e-85 320.1 341 49.9
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 1.0e-82 311.6 402 43.8
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 6.5e-82 308.9 272 53.7
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 5.2e-79 299.3 417 40.3
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.6e-78 297.0 307 49.8
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.4e-71 274.6 304 47.0
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 2.8e-69 266.9 388 42.5
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 6.1e-64 249.2 340 40.0
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 4.0e-63 246.5 239 51.5
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 4.9e-61 239.6 232 53.0
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 2.3e-58 230.7 233 51.9
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 1.4e-55 221.5 238 48.7
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 1.8e-47 194.5 285 41.4
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 6.8e-47 192.6 286 36.7
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 3.4e-38 163.7 232 43.1
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 1.9e-36 157.9 210 40.5
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 4.1e-36 156.8 391 28.6
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 6.2e-32 142.9 240 40.8
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 8.1e-32 142.5 391 29.2
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.6e-22 110.9 176 38.1
Aqoxy4G01848 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 1.8e-15 88.2 98 48.0
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 5.5e-12 76.6 103 35.9
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 1.3e-10 72.0 103 34.0
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 8.2e-08 62.8 92 35.9


User provided reference genes

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