Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 2.6e-64 250.8 122 100.0
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.7e-45 187.6 112 76.8
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.0e-41 174.1 119 66.4
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 5.2e-41 173.3 119 68.1
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 68.9
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.9e-39 166.8 120 63.3
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 6.4e-39 166.4 120 62.5
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 1.1e-38 165.6 120 64.2
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 1.1e-38 165.6 120 61.7
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.8e-38 164.9 120 64.2
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 2.4e-38 164.5 116 66.4
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 5.4e-38 163.3 120 61.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 5.4e-38 163.3 116 65.5
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.7e-37 161.0 120 61.7
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.3e-36 158.7 120 62.5
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 3.0e-36 157.5 121 62.0
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 3.0e-36 157.5 120 59.2
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 6.6e-36 156.4 113 63.7
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 8.6e-36 156.0 120 60.8
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.1e-35 155.6 119 59.7
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 1.1e-35 155.6 120 57.5
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 7.3e-35 152.9 119 58.0
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.6e-34 151.8 120 56.7
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 3.6e-34 150.6 118 55.9
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 3.6e-34 150.6 119 58.0
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 3.6e-34 150.6 119 58.0
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 4.7e-34 150.2 113 61.9
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 4.7e-34 150.2 120 59.2
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 6.2e-34 149.8 121 61.2
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 8.0e-34 149.4 113 61.9
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 8.0e-34 149.4 119 58.0
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 2.3e-33 147.9 119 56.3
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 2.3e-33 147.9 116 58.6
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 4.0e-33 147.1 120 57.5
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 4.0e-33 147.1 120 55.8
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 6.8e-33 146.4 120 55.0
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 6.8e-33 146.4 120 55.0
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 6.8e-33 146.4 119 58.8
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 8.9e-33 146.0 120 54.2
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 2.6e-32 144.4 113 60.2
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 5.8e-32 143.3 122 56.6
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.3e-31 142.1 115 58.3
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 2.2e-31 141.4 120 54.2
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 4.9e-31 140.2 123 55.3
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 8.3e-31 139.4 120 51.7
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 5.4e-30 136.7 125 55.2
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 7.0e-30 136.3 121 54.5
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 7.0e-30 136.3 119 54.6
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 7.0e-30 136.3 119 54.6
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 9.2e-30 136.0 119 52.1
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.2e-29 135.6 121 52.9
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 1.6e-29 135.2 119 54.6
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.6e-29 135.2 119 54.6
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 2.0e-29 134.8 119 54.6
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-29 134.4 120 53.3
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 3.5e-29 134.0 113 54.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 4.6e-29 133.7 123 52.8
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 6.0e-29 133.3 123 53.7
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 6.0e-29 133.3 123 56.1
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 3.0e-28 131.0 122 55.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 5.0e-28 130.2 113 53.1
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 5.0e-28 130.2 85 70.6
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 5.0e-28 130.2 123 51.2
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 1.1e-27 129.0 122 52.5
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 1.5e-27 128.6 116 56.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 1.2e-26 125.6 121 51.2
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 2.1e-26 124.8 123 52.0
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.8e-26 124.4 115 52.2
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 4.7e-26 123.6 127 54.3
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 6.2e-26 123.2 132 49.2
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.4e-25 122.1 128 50.0
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.8e-25 121.7 128 47.7
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 5.2e-25 120.2 121 49.6
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 3.4e-24 117.5 126 49.2
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 4.4e-24 117.1 127 45.7
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 4.4e-24 117.1 128 46.1
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 4.4e-24 117.1 128 46.1
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 3.7e-23 114.0 70 72.9
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 4.9e-23 113.6 117 50.4
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 2.7e-21 107.8 134 44.8
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 2.7e-21 107.8 134 47.8
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 3.5e-21 107.5 124 47.6
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 4.6e-21 107.1 126 47.6
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.3e-20 105.5 71 63.4
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 6.6e-20 103.2 135 41.5
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 6.6e-20 103.2 96 55.2
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 6.6e-20 103.2 119 45.4
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.5e-19 101.3 130 43.1
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.5e-19 101.3 120 44.2
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 3.3e-19 100.9 122 44.3
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 4.3e-19 100.5 133 43.6
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.2e-18 99.0 133 42.1
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.2e-18 99.0 133 42.9
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 3.6e-18 97.4 129 44.2
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 3.1e-17 94.4 113 44.2
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 3.1e-17 94.4 113 44.2
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.1e-17 94.4 115 43.5
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 6.8e-17 93.2 113 44.2
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 8.9e-17 92.8 113 44.2
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 4.9e-15 87.0 130 38.5
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 4.1e-14 84.0 43 88.4
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 9.2e-14 82.8 109 41.3
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 9.2e-14 82.8 103 42.7
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 7.6e-08 63.2 35 80.0
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 8.4e-07 59.7 36 77.8
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 2.4e-06 58.2 36 72.2


User provided reference genes

Program Settings