Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-45 186.0 90 100.0
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-45 186.0 90 100.0
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-45 186.0 90 100.0
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-45 186.0 90 100.0
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-45 186.0 90 100.0
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 5.2e-44 180.6 90 96.7
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 3.4e-43 177.9 90 93.3
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 5.8e-43 177.2 90 95.6
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 7.5e-43 176.8 90 95.6
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.9e-41 172.2 90 88.9
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-40 168.3 90 91.1
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-40 168.3 90 91.1
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 2.7e-40 168.3 90 91.1
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 4.6e-40 167.5 90 88.9
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 6.0e-40 167.2 90 88.9
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 6.0e-40 167.2 90 90.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 6.0e-40 167.2 90 91.1
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 6.0e-40 167.2 90 88.9
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 7.8e-40 166.8 90 90.0
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-39 166.0 90 91.1
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.7e-39 165.6 90 86.7
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-39 165.2 90 88.9
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.0e-39 164.9 90 87.8
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.0e-39 164.9 90 87.8
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 6.6e-39 163.7 92 89.1
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 6.6e-39 163.7 92 89.1
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 8.6e-39 163.3 89 87.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.9e-38 162.2 90 87.8
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.9e-38 162.2 90 87.8
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.5e-38 161.8 89 83.1
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 4.3e-38 161.0 90 84.4
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 7.3e-38 160.2 90 86.7
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 9.5e-38 159.8 90 85.6
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.1e-37 158.7 90 85.6
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-36 156.4 87 85.1
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 1.4e-36 156.0 90 83.3
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-36 155.2 90 84.4
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 3.1e-36 154.8 90 84.4
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 3.1e-36 154.8 90 84.4
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 3.1e-36 154.8 90 84.4
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 3.1e-36 154.8 90 84.4
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 3.1e-36 154.8 90 81.1
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 5.2e-36 154.1 90 84.4
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 8.9e-36 153.3 90 83.3
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.7e-34 147.9 85 83.5
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 6.4e-34 147.1 90 76.7
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.1e-33 146.4 90 82.2
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 9.2e-33 143.3 89 80.9
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 4.7e-29 131.0 73 78.1
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 8.1e-29 130.2 90 72.2
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 3.7e-26 121.3 70 82.9
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 8.3e-26 120.2 58 96.6
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-25 119.8 62 90.3
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 1.4e-25 119.4 64 92.2
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.4e-25 119.4 70 81.4
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 9.2e-25 116.7 63 85.7
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 2.3e-23 112.1 65 81.5
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 4.3e-22 107.8 64 79.7
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 1.6e-21 105.9 70 67.1
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 2.8e-21 105.1 88 58.0
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 4.7e-21 104.4 80 66.2
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 6.2e-21 104.0 94 57.4
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 3.1e-20 101.7 65 70.8
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 5.2e-20 100.9 65 69.2
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 1.7e-18 95.9 60 71.7
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 1.1e-17 93.2 48 91.7
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.6e-16 89.4 48 87.5
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 7.8e-16 87.0 55 74.5
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 3.9e-15 84.7 44 88.6
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.9e-14 82.4 42 90.5
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 3.3e-14 81.6 43 90.7
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 9.6e-14 80.1 45 84.4
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 9.6e-14 80.1 45 84.4
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 9.6e-14 80.1 45 84.4
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 9.6e-14 80.1 45 84.4
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.7e-13 77.8 37 100.0
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 8.1e-13 77.0 50 72.0
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 8.1e-13 77.0 50 72.0
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 1.1e-12 76.6 43 81.4
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 1.8e-12 75.9 59 69.5
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.5e-11 72.8 37 89.2
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 3.4e-11 71.6 37 83.8
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 3.4e-11 71.6 36 91.7
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 7.6e-11 70.5 37 86.5
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 7.6e-11 70.5 37 83.8
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.9e-11 70.1 36 88.9
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 2.9e-10 68.6 36 86.1
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 3.2e-09 65.1 47 63.8
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.2e-08 63.2 84 46.4
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 3.3e-06 55.1 79 44.3


User provided reference genes

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