Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.5e-203 711.8 345 100.0
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 6.2e-138 494.6 341 70.7
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.1e-137 492.3 335 71.6
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 4.2e-134 481.9 337 67.4
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 4.6e-133 478.4 339 66.7
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 1.5e-128 463.4 337 65.0
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 2.2e-127 459.5 339 67.0
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 1.9e-126 456.4 345 64.3
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.1e-123 447.2 339 63.7
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 1.5e-123 446.8 339 62.2
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 4.3e-123 445.3 339 62.5
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 1.6e-122 443.4 344 62.8
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.2e-122 443.0 344 63.4
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 3.1e-121 439.1 337 62.0
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 4.1e-121 438.7 335 63.0
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.3e-121 438.3 339 63.1
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.2e-120 437.2 343 59.8
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 2.6e-120 436.0 337 60.2
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 7.7e-120 434.5 331 64.4
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.0e-119 434.1 338 59.8
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 2.2e-119 433.0 338 60.4
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 6.5e-119 431.4 339 63.1
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 8.5e-119 431.0 338 60.4
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 8.5e-119 431.0 344 62.5
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 2.5e-118 429.5 339 59.3
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 7.2e-118 427.9 338 59.5
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 9.4e-118 427.6 339 59.0
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 1.2e-117 427.2 338 59.5
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 2.1e-117 426.4 338 59.8
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 2.7e-117 426.0 339 59.3
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 3.6e-117 425.6 344 61.0
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.8e-116 423.3 338 59.2
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 3.0e-116 422.5 322 61.8
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 3.0e-116 422.5 340 58.8
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 3.9e-116 422.2 337 61.4
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.7e-116 421.4 337 60.2
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 1.5e-115 420.2 339 60.5
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.0e-115 419.9 341 58.7
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 2.0e-115 419.9 338 58.6
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.6e-115 419.5 311 64.0
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 5.7e-115 418.3 339 60.8
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 7.4e-115 417.9 339 60.5
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 2.8e-114 416.0 318 59.7
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 2.8e-114 416.0 310 63.5
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 2.8e-114 416.0 337 59.9
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 1.1e-113 414.1 337 59.3
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.8e-113 413.3 339 57.5
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 3.1e-113 412.5 341 58.9
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 4.1e-113 412.1 345 58.3
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 5.3e-113 411.8 337 59.1
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 9.1e-113 411.0 341 58.1
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 1.5e-112 410.2 339 57.2
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.5e-112 410.2 341 59.5
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 2.6e-112 409.5 340 58.2
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 5.9e-112 408.3 380 53.7
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 7.7e-112 407.9 306 62.1
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.7e-111 406.8 338 59.2
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 2.2e-111 406.4 339 56.9
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 5.0e-111 405.2 339 58.1
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 5.5e-110 401.7 339 57.2
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 1.6e-109 400.2 343 58.0
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.0e-108 397.5 339 56.6
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 1.1e-107 394.0 338 58.3
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 2.0e-107 393.3 339 56.6
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 4.4e-107 392.1 322 58.4
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 7.4e-107 391.3 339 56.6
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 9.7e-107 391.0 335 55.8
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 1.3e-106 390.6 338 55.3
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 3.1e-105 386.0 317 57.1
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 3.1e-105 386.0 310 61.3
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 4.1e-105 385.6 317 57.1
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 5.9e-104 381.7 343 54.5
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 1.0e-103 380.9 330 55.5
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 1.3e-103 380.6 330 55.5
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.3e-103 380.6 344 54.7
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.7e-103 380.2 339 53.1
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 2.2e-103 379.8 306 59.8
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 3.8e-103 379.0 248 69.8
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 8.5e-103 377.9 315 56.2
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.5e-102 377.1 310 58.1
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 3.2e-102 375.9 338 55.6
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.6e-101 372.5 339 55.5
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 8.0e-101 371.3 339 54.3
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.2e-99 367.5 325 54.2
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.5e-99 367.1 337 53.4
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 1.5e-99 367.1 325 55.1
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.0e-99 366.7 338 54.7
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 5.7e-99 365.2 338 54.7
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 1.7e-98 363.6 312 56.1
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.7e-98 363.6 338 53.8
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 3.7e-98 362.5 338 54.4
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 4.8e-98 362.1 338 54.4
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 1.4e-97 360.5 273 64.5
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 4.1e-97 359.0 338 54.1
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 5.3e-97 358.6 353 52.4
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 9.1e-97 357.8 338 52.4
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 2.7e-96 356.3 337 53.1
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.5e-96 355.9 331 53.2
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 3.5e-96 355.9 338 52.1
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 4.5e-96 355.5 265 63.4
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 7.7e-96 354.8 323 53.3
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.7e-95 353.6 339 52.8
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 2.9e-95 352.8 338 51.5
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.5e-94 350.5 296 57.4
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.6e-93 347.1 304 56.2
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 2.1e-93 346.7 337 51.9
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 4.7e-93 345.5 306 54.2
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.4e-92 344.0 340 50.9
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 3.0e-92 342.8 337 51.9
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 1.2e-91 340.9 341 52.2
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 2.0e-91 340.1 337 51.6
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 7.5e-91 338.2 347 51.6
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 9.8e-91 337.8 341 53.1
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 9.8e-91 337.8 338 50.0
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 2.4e-89 333.2 339 51.6
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 2.4e-89 333.2 347 49.9
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 4.1e-89 332.4 339 51.3
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 2.0e-88 330.1 338 52.1
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 4.5e-88 328.9 343 51.9
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 1.3e-87 327.4 348 51.1
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.5e-86 323.9 337 50.1
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 2.5e-86 323.2 339 50.4
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 4.7e-85 318.9 337 49.0
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-83 313.9 344 48.0
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.7e-82 310.5 340 48.5
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 8.3e-82 308.1 340 48.5
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 8.3e-82 308.1 340 48.5
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.8e-81 307.0 315 50.2
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 3.1e-81 306.2 336 48.2
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 4.1e-81 305.8 339 47.5
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 4.1e-81 305.8 334 48.5
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.0e-80 303.5 324 48.5
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.3e-79 300.8 324 48.1
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.3e-79 300.8 336 44.9
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.3e-79 300.1 267 54.7
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.5e-78 297.4 324 47.8
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 3.3e-78 296.2 341 44.6
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 9.5e-78 294.7 218 63.8
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.1e-77 293.5 326 45.1
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.2e-76 288.9 292 51.0
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 7.0e-73 278.5 266 53.8
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 1.2e-67 261.2 325 42.2
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.7e-66 256.1 339 41.3
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.0e-65 251.9 339 41.0
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.0e-65 251.9 339 41.0
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 3.5e-64 249.6 341 41.9
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 9.5e-62 241.5 328 41.8
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.2e-59 234.6 339 39.2
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.4e-59 232.6 210 53.8
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.7e-58 229.6 273 46.5
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.7e-58 229.6 315 37.8
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 4.1e-57 226.1 290 41.7
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.8e-56 221.9 191 55.0
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.2e-53 214.5 285 40.0
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 2.1e-53 213.8 340 38.8
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.8e-53 213.4 302 37.7
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 5.2e-52 209.1 209 46.9
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 7.6e-51 205.3 318 35.5
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.3e-50 204.5 318 35.5
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.7e-47 194.1 137 69.3
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 9.0e-44 181.8 134 59.7
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.4e-43 179.5 174 52.3
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.7e-39 165.2 118 69.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.8e-36 157.5 111 69.4
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.6e-35 152.1 154 48.7
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 4.8e-29 132.9 117 55.6
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-27 128.3 258 31.8
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.5e-27 126.3 162 41.4
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.7e-26 124.4 80 70.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 5.1e-23 112.8 91 57.1
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.6e-19 99.0 84 51.2
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 6.7e-15 85.9 64 56.2
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 7.4e-14 82.4 62 61.3
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 4.6e-08 63.2 102 37.3


User provided reference genes

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