Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 5.0e-122 441.0 212 100.0
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 3.9e-82 308.5 213 70.0
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 2.7e-75 285.8 211 65.9
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.5e-73 280.0 212 61.8
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 5.6e-73 278.1 214 62.1
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 7.4e-73 277.7 211 63.5
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 2.1e-72 276.2 212 64.2
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 3.7e-72 275.4 212 65.1
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 4.8e-72 275.0 219 61.2
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 8.1e-72 274.2 212 62.7
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.4e-71 273.5 213 63.8
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 9.0e-71 270.8 214 61.7
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 2.6e-70 269.2 213 63.8
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 4.5e-70 268.5 197 64.0
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 1.7e-69 266.5 198 62.1
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 2.9e-69 265.8 160 73.1
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.9e-69 265.8 215 61.4
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 4.9e-69 265.0 214 59.8
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 4.9e-69 265.0 214 59.8
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 4.9e-69 265.0 158 71.5
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 8.4e-69 264.2 200 62.5
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 8.4e-69 264.2 212 58.5
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.9e-68 263.1 158 70.3
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 9.3e-68 260.8 214 57.0
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.2e-67 260.4 186 65.6
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.2e-67 260.4 210 57.6
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 6.0e-67 258.1 169 66.9
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 6.0e-67 258.1 158 72.2
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 7.9e-67 257.7 158 69.6
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 7.9e-67 257.7 163 70.6
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 1.8e-66 256.5 162 68.5
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 3.0e-66 255.8 158 73.4
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 5.1e-66 255.0 159 69.8
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 6.7e-66 254.6 212 59.9
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 8.7e-66 254.2 156 71.2
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.1e-65 253.8 179 63.1
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 1.1e-65 253.8 156 69.9
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 1.1e-65 253.8 160 71.2
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 2.5e-65 252.7 156 69.9
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 4.3e-65 251.9 159 69.8
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 5.7e-65 251.5 159 69.8
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 5.7e-65 251.5 160 70.6
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 7.4e-65 251.1 199 62.3
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 1.6e-64 250.0 152 72.4
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 1.6e-64 250.0 206 57.8
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 1.6e-64 250.0 163 69.3
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 2.1e-64 249.6 214 58.9
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 2.8e-64 249.2 162 67.3
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 4.8e-64 248.4 152 71.7
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 4.8e-64 248.4 212 56.6
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 6.2e-64 248.1 214 56.1
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.1e-63 247.3 212 59.4
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 1.1e-63 247.3 159 68.6
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.1e-63 247.3 159 67.3
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.8e-63 246.5 163 68.7
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.8e-63 246.5 159 69.8
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 2.4e-63 246.1 159 69.8
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 5.3e-63 245.0 159 67.3
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 6.9e-63 244.6 139 78.4
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 9.0e-63 244.2 197 62.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 9.0e-63 244.2 163 66.9
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 4.5e-62 241.9 162 66.7
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 4.5e-62 241.9 162 66.7
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 5.8e-62 241.5 158 68.4
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 7.6e-62 241.1 212 56.6
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 7.6e-62 241.1 162 66.7
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 7.6e-62 241.1 162 67.9
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.0e-61 240.7 157 67.5
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 1.0e-61 240.7 159 67.9
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.3e-61 240.4 158 67.1
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 2.2e-61 239.6 158 67.1
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 5.0e-61 238.4 158 66.5
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 8.4e-61 237.7 178 62.4
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 2.5e-60 236.1 202 57.9
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 3.2e-60 235.7 181 62.4
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 7.2e-60 234.6 188 60.6
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 7.2e-60 234.6 188 60.6
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 7.2e-60 234.6 188 60.6
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 7.2e-60 234.6 182 59.3
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 1.2e-59 233.8 202 57.4
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.2e-59 233.8 152 67.8
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.1e-59 233.0 175 61.7
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.7e-59 232.6 180 60.0
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 7.9e-59 231.1 199 56.3
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 1.3e-58 230.3 180 60.0
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 7.4e-57 224.6 199 57.3
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 1.4e-55 220.3 141 71.6
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 4.2e-52 208.8 183 56.8
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 9.4e-52 207.6 212 48.1
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 2.7e-51 206.1 157 56.7
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.1e-49 200.7 159 59.1
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 1.1e-47 194.1 204 46.6
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 7.9e-43 177.9 149 53.0
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.3e-40 170.6 134 53.7
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 2.2e-40 169.9 140 51.4
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 2.0e-38 163.3 126 60.3
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 3.5e-38 162.5 196 42.9
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 1.0e-37 161.0 152 48.7
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 3.0e-34 149.4 208 39.4
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.8e-29 132.5 82 70.7
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.0e-26 124.4 165 37.6
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.4e-26 124.0 135 46.7
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 8.8e-26 121.3 146 47.3
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 3.2e-20 102.8 52 78.8
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 2.1e-19 100.1 148 37.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.8e-16 89.7 54 75.9
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 8.6e-13 78.2 44 77.3
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 9.2e-07 58.2 74 40.5


User provided reference genes

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