Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 7.9e-48 194.9 99 100.0
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 2.2e-34 150.2 100 78.0
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.8e-31 140.6 99 75.8
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 2.3e-31 140.2 96 74.0
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 8.8e-31 138.3 98 74.5
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 1.2e-30 137.9 103 72.8
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.3e-29 134.4 99 70.7
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.7e-29 134.0 100 70.0
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 1.7e-29 134.0 100 69.0
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 2.2e-29 133.7 105 70.5
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 2.2e-29 133.7 97 75.3
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 3.7e-29 132.9 99 70.7
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 4.8e-29 132.5 94 72.3
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 4.8e-29 132.5 97 73.2
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 8.3e-29 131.7 101 70.3
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.1e-28 131.3 101 68.3
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 1.1e-28 131.3 95 71.6
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 1.4e-28 131.0 96 71.9
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.8e-28 130.6 98 73.5
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.4e-28 130.2 99 71.7
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 2.4e-28 130.2 99 70.7
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 4.1e-28 129.4 103 67.0
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.3e-28 129.0 98 71.4
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 7.0e-28 128.6 99 68.7
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.0e-27 127.1 103 67.0
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 3.5e-27 126.3 95 70.5
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 3.5e-27 126.3 99 70.7
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 3.5e-27 126.3 94 69.1
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 3.5e-27 126.3 98 69.4
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 4.5e-27 125.9 99 66.7
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 4.5e-27 125.9 95 69.5
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 1.0e-26 124.8 97 64.9
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 1.0e-26 124.8 95 70.5
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.7e-26 124.0 95 71.6
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 2.2e-26 123.6 95 68.4
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 2.9e-26 123.2 99 69.7
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 3.8e-26 122.9 96 65.6
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 5.0e-26 122.5 67 86.6
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 8.5e-26 121.7 98 67.3
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.5e-25 120.9 99 65.7
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 2.5e-25 120.2 107 63.6
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 7.2e-25 118.6 102 62.7
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 9.4e-25 118.2 101 65.3
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.2e-24 117.9 95 69.5
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.6e-24 117.5 100 66.0
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 3.6e-24 116.3 96 65.6
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 4.7e-24 115.9 104 63.5
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 4.7e-24 115.9 105 61.0
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 6.1e-24 115.5 99 65.7
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 8.0e-24 115.2 99 65.7
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 8.0e-24 115.2 98 66.3
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 8.0e-24 115.2 66 81.8
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 8.0e-24 115.2 67 80.6
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 1.0e-23 114.8 95 67.4
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 1.4e-23 114.4 77 74.0
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 1.4e-23 114.4 97 61.9
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 1.4e-23 114.4 98 60.2
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.4e-23 114.4 83 73.5
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.8e-23 114.0 107 62.6
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 3.0e-23 113.2 103 62.1
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 4.0e-23 112.8 105 60.0
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 5.2e-23 112.5 99 64.6
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 5.2e-23 112.5 86 68.6
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 8.8e-23 111.7 102 60.8
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.2e-22 111.3 84 70.2
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.2e-22 111.3 102 61.8
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 1.2e-22 111.3 102 61.8
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 1.2e-22 111.3 102 61.8
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 2.0e-22 110.5 83 69.9
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 2.6e-22 110.2 94 64.9
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 7.5e-22 108.6 95 60.0
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.3e-21 107.8 95 64.2
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 2.2e-21 107.1 84 65.5
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 4.8e-21 105.9 94 64.9
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 4.8e-21 105.9 98 60.2
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 4.8e-21 105.9 63 82.5
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 4.8e-21 105.9 102 58.8
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 4.8e-21 105.9 63 81.0
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 6.3e-21 105.5 62 83.9
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 6.3e-21 105.5 62 83.9
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 8.3e-21 105.1 85 68.2
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 1.4e-20 104.4 63 82.5
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 1.4e-20 104.4 63 81.0
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 3.1e-20 103.2 51 98.0
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 7.0e-20 102.1 94 61.7
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 1.2e-19 101.3 63 77.8
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.2e-19 101.3 52 92.3
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.2e-19 101.3 84 69.0
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 2.7e-19 100.1 90 58.9
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-18 97.1 63 79.4
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.1e-17 94.7 96 57.3
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 2.1e-16 90.5 99 53.5
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 3.0e-15 86.7 89 53.9
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.5e-14 84.3 61 67.2
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.3e-10 71.2 70 52.9


User provided reference genes

Program Settings