Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26103 Nelumbo nucifera HOM05D001441 ORTHO05D001332 5.2e-60 234.2 119 100.0
Nn2g12397 Nelumbo nucifera HOM05D001441 ORTHO05D001332 5.3e-20 101.3 61 80.3
Nn4g24563 Nelumbo nucifera HOM05D001441 ORTHO05D001332 3.4e-19 98.6 66 74.2
Nn8g39909 Nelumbo nucifera HOM05D001441 ORTHO05D001332 6.1e-16 87.8 54 75.9
Hma1.2p1_0109F.1_g052640 Hydrangea macrophylla HOM05D001441 ORTHO05D001332 2.3e-15 85.9 54 70.4
Lsat_1_v5_gn_1_30920 Lactuca sativa HOM05D000470 ORTHO05D000348 8.8e-15 84.0 45 80.0
MBI14_g34253_MAGBIO Magnolia biondii HOM05D001441 ORTHO05D001332 1.5e-14 83.2 47 76.6
TAR625G0184 Trochodendron aralioides HOM05D001441 ORTHO05D001332 2.0e-14 82.8 51 72.5
Lj9A492T53 Lonicera japonica HOM05D001441 ORTHO05D001332 2.5e-14 82.4 43 81.4
Lalb_Chr24g0392821 Lupinus albus HOM05D001441 ORTHO05D001332 2.5e-14 82.4 44 77.3
CAN.G407.5 Capsicum annuum HOM05D001441 ORTHO05D001332 3.3e-14 82.0 50 76.0
PSO063G3556 Papaver somniferum HOM05D001441 ORTHO05D001332 3.3e-14 82.0 53 69.8
PSO782G1660 Papaver somniferum HOM05D001441 ORTHO05D001332 3.3e-14 82.0 53 69.8
COL.COLO4_26736 Corchorus olitorius HOM05D001441 ORTHO05D001332 4.3e-14 81.6 48 72.9
arahy.Tifrunner.gnm1.ann1.8P32VS Arachis hypogaea HOM05D001441 ORTHO05D001332 5.7e-14 81.3 45 75.6
arahy.Tifrunner.gnm1.ann1.LYRN80 Arachis hypogaea HOM05D001441 ORTHO05D001332 5.7e-14 81.3 45 75.6
VMungo0331G0077 Vigna mungo HOM05D001441 ORTHO05D001332 5.7e-14 81.3 47 70.2
MELO3C026734.2 Cucumis melo HOM05D001441 ORTHO05D001332 7.4e-14 80.9 46 80.4
CsaV3_3G032750 Cucumis sativus L. HOM05D001441 ORTHO05D001332 7.4e-14 80.9 46 80.4
Nn6g34237 Nelumbo nucifera HOM05D001441 ORTHO05D001332 7.4e-14 80.9 54 74.1
Solyc03g117560.3 Solanum lycopersicum HOM05D001441 ORTHO05D001332 9.7e-14 80.5 50 74.0
Sopen03g036470 Solanum pennellii HOM05D001441 ORTHO05D001332 9.7e-14 80.5 50 74.0
PGSC0003DMG400014209 Solanum tuberosum HOM05D007168 ORTHO05D009495 9.7e-14 80.5 50 74.0
Hma1.2p1_0329F.1_g127140 Hydrangea macrophylla HOM05D001441 ORTHO05D001332 1.3e-13 80.1 57 68.4
QL05p035664 Quercus lobata HOM05D001441 ORTHO05D001332 1.3e-13 80.1 57 61.4
Nitab4.5_0001271g0030 Nicotiana tabacum HOM05D001441 ORTHO05D001332 1.7e-13 79.7 53 69.8
Sed0003380 Sechium edule HOM05D001441 ORTHO05D001332 1.7e-13 79.7 45 75.6
Dinv21415 Davidia involucrata HOM05D001441 ORTHO05D001332 2.8e-13 79.0 48 72.9
Thecc.06G042600 Theobroma cacao HOM05D001441 ORTHO05D001332 2.8e-13 79.0 47 74.5
PGR102G2032 Punica granatum HOM05D001441 ORTHO05D001332 3.7e-13 78.6 48 72.9
Thecc.06G042800 Theobroma cacao HOM05D001441 ORTHO05D001332 3.7e-13 78.6 47 74.5
vmacro16850 Vaccinium macrocarpon HOM05D001441 ORTHO05D001332 3.7e-13 78.6 49 75.5
GSVIVG01015979001 Vitis vinifera HOM05D001441 ORTHO05D001332 3.7e-13 78.6 52 69.2
Oeu051572.1 Olea europaea HOM05D001441 ORTHO05D001332 4.8e-13 78.2 45 75.6
Duzib235G1424 Durio zibethinus HOM05D001441 ORTHO05D001332 6.3e-13 77.8 47 72.3
Glyma.07G022000 Glycine max HOM05D001441 ORTHO05D001332 6.3e-13 77.8 47 70.2
TPR.G3322 Trifolium pratense HOM05D001441 ORTHO05D001332 6.3e-13 77.8 54 70.4
RcHm_v2.0_Chr2g0132811 Rosa chinensis HOM05D001441 ORTHO05D001332 8.2e-13 77.4 51 72.5
Manes.11G067200 Manihot esculenta HOM05D001441 ORTHO05D001332 1.1e-12 77.0 57 63.2
Peaxi162Scf00553g00527 Petunia axillaris HOM05D001441 ORTHO05D001332 1.4e-12 76.6 52 71.2
Phvul.010G162400 Phaseolus vulgaris HOM05D001441 ORTHO05D001332 1.4e-12 76.6 47 68.1
DCAR_025560 Daucus carota HOM05D001441 ORTHO05D001332 1.8e-12 76.3 45 73.3
Nitab4.5_0001340g0050 Nicotiana tabacum HOM05D001441 ORTHO05D001332 2.4e-12 75.9 52 65.4
Cpa.g.sc10.61 Carica papaya HOM05D001441 ORTHO05D001332 3.1e-12 75.5 58 62.1
CiPaw.01G255300 Carya illinoinensis HOM05D001441 ORTHO05D001332 3.1e-12 75.5 47 72.3
Sopen12g021720 Solanum pennellii HOM05D001441 ORTHO05D001332 3.1e-12 75.5 48 64.6
TWI75G1478 Tripterygium wilfordii HOM05D001441 ORTHO05D001332 3.1e-12 75.5 57 59.6
Cc04_g05180 Coffea canephora HOM05D007168 ORTHO05D009495 4.1e-12 75.1 37 83.8
Migut.D01128 Erythranthe guttata HOM05D001441 ORTHO05D001332 4.1e-12 75.1 57 59.6
Solyc12g042580.2 Solanum lycopersicum HOM05D001441 ORTHO05D001332 4.1e-12 75.1 48 62.5
PGSC0003DMG400028648 Solanum tuberosum HOM05D001441 ORTHO05D001332 4.1e-12 75.1 52 61.5
Eucgr.F03968 Eucalyptus grandis HOM05D001441 ORTHO05D001332 5.3e-12 74.7 48 72.9
Gohir.D05G119400 Gossypium hirsutum HOM05D001441 ORTHO05D001332 5.3e-12 74.7 44 72.7
Gorai.009G123000 Gossypium raimondii HOM05D001441 ORTHO05D001332 5.3e-12 74.7 44 72.7
MD17G1223900 Malus domestica HOM05D001441 ORTHO05D001332 5.3e-12 74.7 41 75.6
Psat7g263160 Pisum sativum HOM05D001441 ORTHO05D001332 5.3e-12 74.7 52 65.4
Potri.001G043600 Populus trichocarpa HOM05D001441 ORTHO05D001332 5.3e-12 74.7 54 64.8
Sabra03G0133900 Salix brachista HOM05D001441 ORTHO05D001332 5.3e-12 74.7 50 70.0
SalBow6G4665 Salvia bowleyana HOM05D001441 ORTHO05D001332 5.3e-12 74.7 43 69.8
Actinidia36872 Actinidia chinensis HOM05D000470 ORTHO05D000348 6.9e-12 74.3 43 67.4
TWI18G1326 Tripterygium wilfordii HOM05D001441 ORTHO05D001332 6.9e-12 74.3 57 59.6
ATR0580G049 Amborella trichopoda HOM05D001441 ORTHO05D001332 9.1e-12 73.9 53 64.2
Haze_16674 Corylus avellana HOM05D001441 ORTHO05D001332 9.1e-12 73.9 47 72.3
FAN02G2392 Fragaria x ananassa HOM05D001441 ORTHO05D001332 9.1e-12 73.9 51 68.6
FAN05G3980 Fragaria x ananassa HOM05D001441 ORTHO05D001332 9.1e-12 73.9 51 68.6
Gohir.A05G118500 Gossypium hirsutum HOM05D001441 ORTHO05D001332 9.1e-12 73.9 49 69.4
Medtr4g007250 Medicago truncatula HOM05D001441 ORTHO05D001332 1.2e-11 73.6 54 66.7
Nn4g24610 Nelumbo nucifera HOM05D001441 ORTHO05D001332 1.2e-11 73.6 57 63.2
unitig_0.g355 Utricularia gibba HOM05D001441 ORTHO05D001332 1.2e-11 73.6 43 72.1
Rhsim12G0187100 Rhododendron simsii HOM05D001441 ORTHO05D001332 1.5e-11 73.2 48 64.6
Cfa001874 Carpinus fangiana HOM05D001441 ORTHO05D001332 2.0e-11 72.8 47 70.2
Potri.003G183300 Populus trichocarpa HOM05D001441 ORTHO05D001332 2.0e-11 72.8 38 78.9
HPP92_004699 Vanilla planifolia HOM05D001441 ORTHO05D001332 2.0e-11 72.8 48 66.7
MD09G1225200 Malus domestica HOM05D001441 ORTHO05D001332 3.4e-11 72.0 52 61.5
Hund00493 Selenicereus undatus HOM05D001441 ORTHO05D001332 3.4e-11 72.0 53 64.2
MSTRG.4675 Avicennia marina HOM05D001441 ORTHO05D001332 4.5e-11 71.6 50 64.0
Prupe.3G099600 Prunus persica HOM05D001441 ORTHO05D001332 4.5e-11 71.6 48 66.7
CANSAT56G0770 Cannabis sativa HOM05D001441 ORTHO05D001332 5.9e-11 71.2 47 63.8
CSS0049769 Camellia sinensis var. sinensis HOM05D001441 ORTHO05D001332 7.7e-11 70.9 35 77.1
Lj3g0002956 Lotus japonicus HOM05D001441 ORTHO05D001332 7.7e-11 70.9 54 61.1
MBI15_g18245_MAGBIO Magnolia biondii HOM05D001441 ORTHO05D001332 7.7e-11 70.9 57 59.6
MBI15_g43155_MAGBIO Magnolia biondii HOM05D001441 ORTHO05D001332 7.7e-11 70.9 57 59.6
CAN.G521.9 Capsicum annuum HOM05D001441 ORTHO05D001332 1.0e-10 70.5 45 62.2
Nitab4.5_0002700g0140 Nicotiana tabacum HOM05D007168 ORTHO05D009495 1.0e-10 70.5 48 70.8
CDE02G1753 Ceratophyllum demersum HOM05D001441 ORTHO05D001332 1.3e-10 70.1 54 59.3
Zm00001eb320500 Zea mays HOM05D001441 ORTHO05D001332 1.3e-10 70.1 49 63.3
CDE05G1009 Ceratophyllum demersum HOM05D001441 ORTHO05D001332 1.7e-10 69.7 49 63.3
AUR62016591 Chenopodium quinoa HOM05D001441 ORTHO05D001332 1.7e-10 69.7 53 60.4
Ciclev10026582m.g Citrus clementina HOM05D001441 ORTHO05D001332 2.9e-10 68.9 52 61.5
Nitab4.5_0009867g0020 Nicotiana tabacum HOM05D007168 ORTHO05D009495 2.9e-10 68.9 47 70.2
THA.LOC104812414 Tarenaya hassleriana HOM05D001441 ORTHO05D001332 2.9e-10 68.9 52 61.5
EL10Ac9g21858 Beta vulgaris HOM05D001441 ORTHO05D001332 3.8e-10 68.6 59 57.6
AUR62011464 Chenopodium quinoa HOM05D001441 ORTHO05D001332 3.8e-10 68.6 53 60.4
Os09g0557900 Oryza sativa ssp. japonica HOM05D001441 ORTHO05D001332 3.8e-10 68.6 49 63.3
Atru.chr1.2794 Acer truncatum HOM05D001441 ORTHO05D001332 8.5e-10 67.4 37 75.7
Aa31LG7G570 Aethionema arabicum HOM05D001441 ORTHO05D001332 1.1e-09 67.0 56 55.4
SEGI_36586 Sequoiadendron giganteum HOM05D001441 ORTHO05D001332 2.0e-06 56.2 43 58.1
FAN01G1202 Fragaria x ananassa HOM05D000098 ORTHO05D000523 5.7e-06 54.7 45 51.1
ATR0730G141 Amborella trichopoda HOM05D001441 ORTHO05D062890 9.7e-06 53.9 42 50.0


User provided reference genes

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