Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 7.9e-65 250.4 133 100.0
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 7.7e-36 154.1 103 74.8
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 2.9e-35 152.1 110 70.0
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 8.5e-35 150.6 122 68.0
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.9e-34 149.4 119 68.9
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 3.2e-34 148.7 103 74.8
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 4.2e-34 148.3 113 67.3
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 2.7e-33 145.6 117 63.2
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 3.6e-33 145.2 112 66.1
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 3.6e-33 145.2 115 65.2
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 1.0e-32 143.7 121 65.3
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 1.0e-32 143.7 117 65.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.0e-32 143.7 116 63.8
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.4e-32 143.3 118 64.4
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.4e-32 143.3 97 74.2
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 2.3e-32 142.5 112 65.2
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.3e-32 142.5 118 66.1
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 8.8e-32 140.6 97 68.0
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.2e-31 140.2 123 64.2
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.5e-31 139.8 102 64.7
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 2.0e-31 139.4 122 64.8
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 3.4e-31 138.7 104 65.4
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 5.7e-31 137.9 121 63.6
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 1.3e-30 136.7 121 62.8
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.7e-30 136.3 97 69.1
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 4.8e-30 134.8 120 62.5
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 8.3e-30 134.0 114 59.6
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 8.3e-30 134.0 102 66.7
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 1.1e-29 133.7 110 60.0
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.4e-29 133.3 100 63.0
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 2.4e-29 132.5 122 59.0
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 3.1e-29 132.1 133 53.4
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 4.1e-29 131.7 121 62.8
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 7.0e-29 131.0 95 64.2
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 9.1e-29 130.6 97 68.0
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.6e-28 129.8 102 62.7
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 2.0e-28 129.4 97 64.9
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 2.0e-28 129.4 115 58.3
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.7e-28 129.0 100 63.0
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 3.5e-28 128.6 102 61.8
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 4.5e-28 128.3 97 66.0
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 5.9e-28 127.9 93 65.6
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 5.9e-28 127.9 110 59.1
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 5.9e-28 127.9 100 63.0
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 7.7e-28 127.5 115 57.4
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.0e-27 127.1 94 66.0
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 1.0e-27 127.1 118 56.8
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.3e-27 126.7 94 66.0
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 1.7e-27 126.3 113 57.5
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.7e-27 126.3 113 57.5
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.7e-27 126.3 113 57.5
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 1.7e-27 126.3 97 60.8
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.9e-27 125.6 111 63.1
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 2.9e-27 125.6 111 63.1
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 2.9e-27 125.6 96 64.6
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 3.8e-27 125.2 110 57.3
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 6.5e-27 124.4 110 57.3
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.5e-27 124.4 128 57.0
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.5e-27 124.4 128 57.0
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 8.5e-27 124.0 102 59.8
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 1.1e-26 123.6 102 59.8
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.1e-26 123.6 94 66.0
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 1.1e-26 123.6 113 55.8
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.5e-26 123.2 94 61.7
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 1.5e-26 123.2 126 55.6
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 2.5e-26 122.5 111 62.2
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 4.2e-26 121.7 97 61.9
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 5.5e-26 121.3 100 62.0
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 5.5e-26 121.3 101 60.4
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 9.4e-26 120.6 93 65.6
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 1.2e-25 120.2 102 56.9
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.6e-25 119.8 94 61.7
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.6e-25 119.8 95 60.0
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.1e-25 119.4 97 59.8
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 2.1e-25 119.4 101 59.4
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 3.6e-25 118.6 102 56.9
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 6.1e-25 117.9 101 57.4
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 8.0e-25 117.5 97 64.9
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 8.0e-25 117.5 101 58.4
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.0e-24 117.1 111 58.6
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 1.0e-24 117.1 97 56.7
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.4e-24 116.7 96 57.3
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.8e-24 116.3 94 59.6
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 2.3e-24 115.9 105 61.0
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 4.0e-24 115.2 97 62.9
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 5.2e-24 114.8 96 56.2
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 6.8e-24 114.4 94 59.6
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.2e-23 113.6 93 62.4
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 1.2e-23 113.6 97 61.9
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.5e-23 113.2 96 55.2
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 2.0e-23 112.8 97 60.8
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.6e-23 112.5 96 61.5
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 5.7e-23 111.3 104 56.7
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 7.5e-23 110.9 113 56.6
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 7.5e-23 110.9 104 56.7
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 1.7e-22 109.8 94 57.4
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 3.7e-22 108.6 115 53.0
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 3.7e-22 108.6 107 57.0
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 6.3e-22 107.8 92 60.9
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.4e-21 105.9 95 56.8
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.4e-21 105.9 94 59.6
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.0e-20 102.8 78 64.1
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.0e-20 102.8 78 64.1
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 2.9e-19 99.0 124 46.8
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 5.0e-19 98.2 93 53.8
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 2.5e-18 95.9 75 60.0
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 7.2e-18 94.4 71 63.4
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 9.5e-18 94.0 71 62.0
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.2e-17 93.6 96 46.9
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 2.8e-17 92.4 90 56.7
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 3.6e-17 92.0 69 63.8
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 4.7e-17 91.7 102 49.0
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.4e-16 90.1 96 47.9
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 1.8e-16 89.7 95 46.3
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 2.6e-15 85.9 101 49.5
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 2.8e-14 82.4 75 62.7
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.6e-12 76.6 87 42.5
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 6.1e-09 64.7 85 37.6


User provided reference genes

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