Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25655 Nelumbo nucifera HOM05D003155 ORTHO05D012487 6.2e-64 247.3 124 100.0
Nn3g21630 Nelumbo nucifera HOM05D003155 ORTHO05D004342 8.5e-37 157.1 117 67.5
TAR362G0238 Trochodendron aralioides HOM05D003155 ORTHO05D004342 2.5e-28 129.0 117 62.4
TAR362G0957 Trochodendron aralioides HOM05D003155 ORTHO05D004342 5.7e-25 117.9 106 64.2
GSVIVG01011409001 Vitis vinifera HOM05D003155 ORTHO05D004342 5.9e-22 107.8 122 49.2
GSVIVG01028086001 Vitis vinifera HOM05D003155 ORTHO05D004342 1.9e-20 102.8 122 48.4
Dinv33099 Davidia involucrata HOM05D003155 ORTHO05D004342 2.7e-19 99.0 122 45.1
CSS0028730 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 1.5e-17 93.2 93 53.8
vmacro12338 Vaccinium macrocarpon HOM05D003155 ORTHO05D004342 1.5e-17 93.2 117 47.9
Sc08g0003390 Simmondsia chinensis HOM05D003155 ORTHO05D004342 2.0e-17 92.8 90 52.2
Duzib138G0641 Durio zibethinus HOM05D003155 ORTHO05D004342 7.5e-17 90.9 116 48.3
CANSAT25G1273 Cannabis sativa HOM05D003155 ORTHO05D004342 1.3e-16 90.1 105 48.6
Gohir.A11G111100 Gossypium hirsutum HOM05D003155 ORTHO05D004342 2.8e-16 89.0 116 49.1
Thecc.01G310300 Theobroma cacao HOM05D003155 ORTHO05D004342 2.8e-16 89.0 118 49.2
Hund06387 Selenicereus undatus HOM05D003155 ORTHO05D004342 4.8e-16 88.2 81 56.8
vmacro23397 Vaccinium macrocarpon HOM05D003155 ORTHO05D012487 4.8e-16 88.2 118 44.9
Hma1.2p1_1785F.1_g302280 Hydrangea macrophylla HOM05D003155 ORTHO05D004342 8.3e-16 87.4 121 43.8
Lj3A1064T100 Lonicera japonica HOM05D003155 ORTHO05D004342 8.3e-16 87.4 119 44.5
Actinidia11005 Actinidia chinensis HOM05D003155 ORTHO05D004342 1.1e-15 87.0 86 59.3
MBI19_g29997_MAGBIO Magnolia biondii HOM05D003155 ORTHO05D004342 1.4e-15 86.7 119 48.7
Potri.002G198600 Populus trichocarpa HOM05D003155 ORTHO05D004342 1.8e-15 86.3 116 50.0
Cfa005833 Carpinus fangiana HOM05D003155 ORTHO05D004342 2.4e-15 85.9 124 46.8
Atru.chr10.1937 Acer truncatum HOM05D003155 ORTHO05D004342 3.1e-15 85.5 115 46.1
CiPaw.13G147200 Carya illinoinensis HOM05D003155 ORTHO05D004342 3.1e-15 85.5 118 44.1
HanXRQChr17g0540071 Helianthus annuus HOM05D003155 ORTHO05D004342 4.1e-15 85.1 100 52.0
PSO675G7447 Papaver somniferum HOM05D003155 ORTHO05D004342 4.1e-15 85.1 119 44.5
Nitab4.5_0000317g0060 Nicotiana tabacum HOM05D003155 ORTHO05D004342 7.0e-15 84.3 124 45.2
Gohir.D11G116300 Gossypium hirsutum HOM05D003155 ORTHO05D004342 9.1e-15 84.0 116 48.3
Gorai.007G124500 Gossypium raimondii HOM05D003155 ORTHO05D004342 9.1e-15 84.0 116 48.3
Hund00057 Selenicereus undatus HOM05D003155 ORTHO05D004342 9.1e-15 84.0 58 72.4
CAN.G630.85 Capsicum annuum HOM05D003155 ORTHO05D004342 1.2e-14 83.6 123 43.9
CiPaw.07G115200 Carya illinoinensis HOM05D003155 ORTHO05D004342 1.2e-14 83.6 117 43.6
AUR62010120 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.2e-14 83.6 85 51.8
Cc00_g15210 Coffea canephora HOM05D003155 ORTHO05D004342 1.2e-14 83.6 86 54.7
PSO541G5346 Papaver somniferum HOM05D003155 ORTHO05D004342 1.2e-14 83.6 123 44.7
Potri.014G123000 Populus trichocarpa HOM05D003155 ORTHO05D004342 2.0e-14 82.8 116 49.1
Prupe.1G528600 Prunus persica HOM05D003155 ORTHO05D004342 2.0e-14 82.8 112 49.1
Aqoxy5G00145 Aquilegia oxysepala HOM05D003155 ORTHO05D004342 2.7e-14 82.4 100 48.0
Cfa005838 Carpinus fangiana HOM05D003155 ORTHO05D004342 2.7e-14 82.4 120 46.7
Haze_05010 Corylus avellana HOM05D003155 ORTHO05D004342 3.5e-14 82.0 123 44.7
Eucgr.A02767 Eucalyptus grandis HOM05D003155 ORTHO05D004342 3.5e-14 82.0 121 43.0
Nitab4.5_0002557g0030 Nicotiana tabacum HOM05D003155 ORTHO05D004342 3.5e-14 82.0 124 43.5
EL10Ac9g21469 Beta vulgaris HOM05D003155 ORTHO05D004342 5.9e-14 81.3 62 61.3
Cpa.g.sc8.158 Carica papaya HOM05D003155 ORTHO05D004342 7.7e-14 80.9 120 45.0
PGSC0003DMG400023032 Solanum tuberosum HOM05D003155 ORTHO05D004342 7.7e-14 80.9 122 45.1
MSTRG.7527 Avicennia marina HOM05D003155 ORTHO05D004342 1.3e-13 80.1 120 42.5
AUR62013115 Chenopodium quinoa HOM05D003155 ORTHO05D004342 1.3e-13 80.1 85 50.6
SGA_v2.0_scaffold223G42841 Striga asiatica HOM05D003155 ORTHO05D004342 1.3e-13 80.1 123 42.3
Carub.0005s2164 Capsella rubella HOM05D003155 ORTHO05D004342 1.7e-13 79.7 52 73.1
HanXRQChr06g0174841 Helianthus annuus HOM05D003155 ORTHO05D004342 1.7e-13 79.7 92 51.1
TWI09G1633 Tripterygium wilfordii HOM05D003155 ORTHO05D004342 1.7e-13 79.7 116 46.6
CARHR165020 Cardamine hirsuta HOM05D003155 ORTHO05D004342 2.2e-13 79.3 81 54.3
COL.COLO4_23262 Corchorus olitorius HOM05D003155 ORTHO05D004342 2.2e-13 79.3 118 48.3
Peaxi162Scf00591g00412 Petunia axillaris HOM05D003155 ORTHO05D004342 2.2e-13 79.3 94 48.9
Sabra02G0159100 Salix brachista HOM05D003155 ORTHO05D004342 2.2e-13 79.3 116 47.4
TWI53G0211 Tripterygium wilfordii HOM05D003155 ORTHO05D012487 2.2e-13 79.3 121 45.5
Manes.05G001800 Manihot esculenta HOM05D003155 ORTHO05D004342 3.8e-13 78.6 117 47.9
Medtr8g093860 Medicago truncatula HOM05D003155 ORTHO05D004342 3.8e-13 78.6 62 64.5
Sp5g07410 Schrenkiella parvula HOM05D003155 ORTHO05D004342 3.8e-13 78.6 51 72.5
VMungo0251G2281 Vigna mungo HOM05D003155 ORTHO05D004342 5.0e-13 78.2 123 41.5
BcaNung04653 Brassica carinata HOM05D003155 ORTHO05D004342 1.1e-12 77.0 104 43.3
BcaB01g00135 Brassica carinata HOM05D003155 ORTHO05D004342 1.5e-12 76.6 52 69.2
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 1.5e-12 76.6 52 69.2
AL5G36130 Arabidopsis lyrata HOM05D003155 ORTHO05D004342 1.9e-12 76.3 66 60.6
Manes.01G225900 Manihot esculenta HOM05D003155 ORTHO05D004342 1.9e-12 76.3 117 44.4
Ca_22781_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 2.5e-12 75.9 40 87.5
Lj4g0014336 Lotus japonicus HOM05D003155 ORTHO05D004342 2.5e-12 75.9 99 49.5
Ca_14922_v3 Cicer arietinum L. HOM05D003155 ORTHO05D004342 3.2e-12 75.5 40 87.5
Glyma.05G192900 Glycine max HOM05D003155 ORTHO05D004342 3.2e-12 75.5 115 41.7
Pp3c5_3030 Physcomitrium patens HOM05D003155 ORTHO05D004342 3.2e-12 75.5 53 69.8
Psat7g045040 Pisum sativum HOM05D003155 ORTHO05D004342 3.2e-12 75.5 61 63.9
TPR.G37349 Trifolium pratense HOM05D003155 ORTHO05D004342 3.2e-12 75.5 119 44.5
AT3G55010 Arabidopsis thaliana HOM05D003155 ORTHO05D004342 4.2e-12 75.1 92 43.5
C08p30250 Brassica napus HOM05D003155 ORTHO05D004342 4.2e-12 75.1 103 42.7
BolC8t50632H Brassica oleracea HOM05D003155 ORTHO05D004342 4.2e-12 75.1 103 42.7
Thhalv10010436m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 4.2e-12 75.1 46 73.9
Glyma.08G001000 Glycine max HOM05D003155 ORTHO05D004342 4.2e-12 75.1 118 42.4
Solyc04g058090.3 Solanum lycopersicum HOM05D003155 ORTHO05D004342 4.2e-12 75.1 122 43.4
BraA09t40256Z Brassica rapa HOM05D003155 ORTHO05D004342 5.5e-12 74.7 60 63.3
Eucgr.L02454 Eucalyptus grandis HOM05D003155 ORTHO05D004342 5.5e-12 74.7 100 45.0
Eucgr.L03298 Eucalyptus grandis HOM05D003155 ORTHO05D012487 5.5e-12 74.7 100 45.0
Lj5g0009987 Lotus japonicus HOM05D003155 ORTHO05D004342 5.5e-12 74.7 68 55.9
PGR066G0004 Punica granatum HOM05D003155 ORTHO05D004342 5.5e-12 74.7 68 58.8
PGR142G1043 Punica granatum HOM05D003155 ORTHO05D004342 5.5e-12 74.7 68 58.8
SalBow2G2017 Salvia bowleyana HOM05D003155 ORTHO05D004342 5.5e-12 74.7 49 69.4
SalBow8G2165 Salvia bowleyana HOM05D003155 ORTHO05D004342 5.5e-12 74.7 49 69.4
BcaC08g44717 Brassica carinata HOM05D003155 ORTHO05D004342 7.2e-12 74.3 50 70.0
A07p22400 Brassica napus HOM05D003155 ORTHO05D004342 7.2e-12 74.3 49 71.4
BraA07t29916Z Brassica rapa HOM05D003155 ORTHO05D004342 7.2e-12 74.3 49 71.4
Lsat_1_v5_gn_3_29341 Lactuca sativa HOM05D003155 ORTHO05D004342 7.2e-12 74.3 49 75.5
Lalb_Chr08g0238231 Lupinus albus HOM05D003155 ORTHO05D004342 7.2e-12 74.3 117 41.9
arahy.Tifrunner.gnm1.ann1.DJPQ45 Arachis hypogaea HOM05D003155 ORTHO05D004342 9.4e-12 73.9 39 87.2
arahy.Tifrunner.gnm1.ann1.PM89VL Arachis hypogaea HOM05D003155 ORTHO05D004342 9.4e-12 73.9 39 87.2
A09p48030 Brassica napus HOM05D003155 ORTHO05D004342 9.4e-12 73.9 103 43.7
CAN.G405.2 Capsicum annuum HOM05D003155 ORTHO05D004342 9.4e-12 73.9 122 42.6
ClCG01G001560 Citrullus lanatus HOM05D003155 ORTHO05D004342 9.4e-12 73.9 39 87.2
MELO3C005781.2 Cucumis melo HOM05D003155 ORTHO05D004342 9.4e-12 73.9 39 87.2
CsaV3_5G001710 Cucumis sativus L. HOM05D003155 ORTHO05D004342 9.4e-12 73.9 39 87.2
ECA248G1812 Erigeron canadensis HOM05D003155 ORTHO05D004342 9.4e-12 73.9 39 87.2
Migut.M01874 Erythranthe guttata HOM05D003155 ORTHO05D004342 9.4e-12 73.9 125 41.6
Sopen04g025920 Solanum pennellii HOM05D003155 ORTHO05D004342 9.4e-12 73.9 124 40.3
THA.LOC104817470 Tarenaya hassleriana HOM05D003155 ORTHO05D004342 9.4e-12 73.9 91 49.5
Cc11_g04240 Coffea canephora HOM05D003155 ORTHO05D004342 1.2e-11 73.6 59 61.0
Zm00001eb284260 Zea mays HOM05D003155 ORTHO05D004342 1.2e-11 73.6 75 54.7
CSS0047504 Camellia sinensis var. sinensis HOM05D003155 ORTHO05D004342 1.6e-11 73.2 96 47.9
PGR119G0649 Punica granatum HOM05D003155 ORTHO05D004342 1.6e-11 73.2 118 39.8
ATR0693G061 Amborella trichopoda HOM05D003155 ORTHO05D004342 2.1e-11 72.8 43 76.7
DCAR_024227 Daucus carota HOM05D003155 ORTHO05D004342 2.1e-11 72.8 123 43.1
Oeu040091.1 Olea europaea HOM05D003155 ORTHO05D004342 2.1e-11 72.8 39 84.6
Peaxi162Scf00066g00524 Petunia axillaris HOM05D003155 ORTHO05D004342 2.1e-11 72.8 119 42.0
RcHm_v2.0_Chr2g0117751 Rosa chinensis HOM05D003155 ORTHO05D004342 2.1e-11 72.8 75 54.7
Sed0004341 Sechium edule HOM05D003155 ORTHO05D004342 2.1e-11 72.8 39 84.6
TWI53G0331 Tripterygium wilfordii HOM05D003155 ORTHO05D012487 2.1e-11 72.8 118 44.1
Ah.01g001460 Amaranthus hybridus HOM05D003155 ORTHO05D003938 2.7e-11 72.4 48 68.8
C06p22560 Brassica napus HOM05D003155 ORTHO05D004342 2.7e-11 72.4 49 69.4
BolC6t37446H Brassica oleracea HOM05D003155 ORTHO05D004342 2.7e-11 72.4 49 69.4
Phvul.002G273500 Phaseolus vulgaris HOM05D003155 ORTHO05D004342 2.7e-11 72.4 43 76.7
BcaB02g07704 Brassica carinata HOM05D003155 ORTHO05D004342 3.6e-11 72.0 51 70.6
CBR_g16871 Chara braunii HOM05D003155 ORTHO05D004342 3.6e-11 72.0 64 60.9
SGA_v2.0_scaffold1G00231 Striga asiatica HOM05D003155 ORTHO05D004342 4.7e-11 71.6 121 43.0
CDE11G0169 Ceratophyllum demersum HOM05D003155 ORTHO05D004342 6.1e-11 71.2 42 76.2
SMO116G0007 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 6.1e-11 71.2 40 82.5
ECA246G1648 Erigeron canadensis HOM05D003155 ORTHO05D001887 8.0e-11 70.9 43 79.1
HPP92_001922 Vanilla planifolia HOM05D003155 ORTHO05D004342 8.0e-11 70.9 60 60.0
FAN19G1072 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.0e-10 70.5 58 58.6
FAN23G2124 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.0e-10 70.5 58 58.6
FAN26G2094 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.0e-10 70.5 58 58.6
FAN28G3015 Fragaria x ananassa HOM05D003155 ORTHO05D004342 1.0e-10 70.5 58 58.6
Pp3c6_25750 Physcomitrium patens HOM05D003155 ORTHO05D004342 1.0e-10 70.5 41 80.5
Medtr5g093890 Medicago truncatula HOM05D003155 ORTHO05D004342 1.4e-10 70.1 40 77.5
SEGI_27039 Sequoiadendron giganteum HOM05D003155 ORTHO05D004342 1.8e-10 69.7 71 50.7
unitig_37.g12904 Utricularia gibba HOM05D003155 ORTHO05D004342 2.3e-10 69.3 50 72.0
DCAR_027274 Daucus carota HOM05D003155 ORTHO05D004342 3.0e-10 68.9 82 50.0
Lsat_1_v5_gn_8_28960 Lactuca sativa HOM05D003155 ORTHO05D004342 3.0e-10 68.9 63 60.3
Oeu008950.2 Olea europaea HOM05D003155 ORTHO05D004342 3.0e-10 68.9 56 66.1
Aa31sc33G80 Aethionema arabicum HOM05D003155 ORTHO05D004342 4.0e-10 68.6 51 66.7
FvH4_1g23040 Fragaria vesca HOM05D003155 ORTHO05D004342 5.2e-10 68.2 57 57.9
Os03g0831500 Oryza sativa ssp. japonica HOM05D003155 ORTHO05D004342 5.2e-10 68.2 67 50.7
Mapoly0003s0273 Marchantia polymorpha HOM05D003155 ORTHO05D004342 6.8e-10 67.8 48 66.7
Thhalv10018710m.g Eutrema salsugineum HOM05D003155 ORTHO05D004342 1.2e-09 67.0 60 58.3
MD08G1194700 Malus domestica HOM05D003155 ORTHO05D004342 2.0e-09 66.2 99 37.4
AagrBONN_evm.TU.Sc2ySwM_368.880 Anthoceros agrestis HOM05D003155 ORTHO05D004342 2.6e-09 65.9 51 60.8
MD08G1194300 Malus domestica HOM05D003155 ORTHO05D004342 2.6e-09 65.9 56 62.5
MD15G1382400 Malus domestica HOM05D003155 ORTHO05D004342 2.6e-09 65.9 73 52.1
Sp5g14230 Schrenkiella parvula HOM05D003155 ORTHO05D004342 2.6e-09 65.9 52 61.5
SMO232G0073 Selaginella moellendorffii HOM05D003155 ORTHO05D004342 1.3e-08 63.5 37 81.1
TPR.G14992 Trifolium pratense HOM05D003155 ORTHO05D410879 1.3e-08 63.5 39 76.9
AagrBONN_evm.TU.Sc2ySwM_344.1369 Anthoceros agrestis HOM05D003155 ORTHO05D004342 1.7e-08 63.2 62 54.8
TPR.G22009 Trifolium pratense HOM05D003155 ORTHO05D012487 1.7e-08 63.2 37 78.4
TPR.G31811 Trifolium pratense HOM05D003155 ORTHO05D004342 2.2e-08 62.8 54 61.1
Cc11_g04200 Coffea canephora HOM05D003155 ORTHO05D012487 1.8e-07 59.7 52 57.7
PRCOL_00001570 Prasinoderma coloniale HOM05D003155 ORTHO05D004342 2.4e-07 59.3 37 70.3
Cre07.g318750 Chlamydomonas reinhardtii HOM05D003155 ORTHO05D004342 4.1e-07 58.5 59 55.9


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