Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 3.9e-279 964.1 479 100.0
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.0e-202 710.3 482 73.7
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 1.0e-186 657.1 477 69.6
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 6.1e-184 647.9 480 67.5
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 4.0e-183 645.2 481 68.0
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 1.5e-182 643.3 475 66.9
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 5.4e-180 634.8 481 66.5
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 9.1e-180 634.0 484 66.1
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 4.0e-175 618.6 478 65.9
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 5.2e-175 618.2 475 64.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.5e-174 616.7 475 63.8
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 3.4e-174 615.5 481 62.6
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 3.4e-174 615.5 475 65.9
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 9.8e-174 614.0 482 64.9
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 2.2e-173 612.8 476 64.3
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 4.9e-173 611.7 477 64.6
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 6.3e-173 611.3 480 63.3
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 6.3e-173 611.3 484 63.6
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 5.4e-172 608.2 481 63.4
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 7.0e-172 607.8 476 64.1
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 4.6e-171 605.1 474 63.7
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 1.3e-170 603.6 476 63.9
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.7e-170 603.2 474 64.6
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 2.9e-170 602.4 482 64.5
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 2.9e-170 602.4 475 64.4
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 2.9e-170 602.4 482 64.9
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 2.8e-168 595.9 482 63.3
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.1e-167 592.4 484 63.6
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 3.1e-167 592.4 472 64.4
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 1.5e-166 590.1 488 63.1
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.5e-166 590.1 483 63.8
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 3.7e-165 585.5 471 62.4
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 8.3e-165 584.3 478 62.8
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 2.4e-164 582.8 479 61.4
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 3.5e-163 578.9 470 62.6
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 3.9e-162 575.5 478 59.2
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 5.0e-162 575.1 476 60.3
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 1.5e-161 573.5 481 60.9
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.9e-161 573.2 475 61.7
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 2.5e-161 572.8 479 60.5
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 8.1e-160 567.8 537 57.0
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 1.8e-159 566.6 478 59.2
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 3.1e-159 565.8 476 59.9
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 4.0e-159 565.5 478 59.4
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 5.2e-159 565.1 476 59.7
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 6.8e-159 564.7 509 58.0
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 6.8e-159 564.7 476 60.3
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 6.8e-159 564.7 480 61.0
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.6e-158 562.8 484 60.1
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 3.4e-158 562.4 480 60.4
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 4.4e-158 562.0 472 61.0
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 7.5e-158 561.2 485 60.2
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 2.2e-157 559.7 514 56.4
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.9e-157 559.3 475 59.2
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 8.3e-157 557.8 476 59.2
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 2.4e-156 556.2 474 59.3
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 9.2e-156 554.3 485 57.5
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 9.2e-156 554.3 481 59.9
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 9.2e-156 554.3 476 59.0
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 2.1e-155 553.1 474 59.1
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 2.1e-155 553.1 476 59.2
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.1e-155 553.1 475 58.3
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 3.5e-155 552.4 489 57.1
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 3.5e-155 552.4 474 59.5
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.7e-154 550.1 431 64.5
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 3.9e-154 548.9 476 58.6
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 3.9e-154 548.9 476 58.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 6.6e-154 548.1 478 59.2
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 6.6e-154 548.1 478 59.2
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 1.1e-153 547.4 476 59.2
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 4.3e-153 545.4 476 59.9
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 7.3e-153 544.7 474 58.4
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 7.3e-153 544.7 480 59.4
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 3.6e-152 542.3 474 60.1
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 4.7e-152 542.0 472 58.7
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 6.8e-151 538.1 512 54.5
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.6e-150 536.2 475 57.1
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.2e-149 533.1 507 54.2
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 1.1e-148 530.8 473 57.7
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 1.1e-148 530.8 436 63.8
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 2.4e-148 529.6 481 58.2
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 8.6e-146 521.2 506 54.3
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 5.6e-145 518.5 478 55.0
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 6.2e-144 515.0 401 65.3
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 8.9e-143 511.1 400 65.0
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.2e-141 506.5 487 56.1
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 3.9e-138 495.7 476 54.6
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 2.8e-136 489.6 461 56.0
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.4e-135 486.5 375 66.7
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 2.1e-131 473.4 470 50.4
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.5e-131 472.6 373 64.1
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.5e-131 472.6 442 54.5
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 8.7e-130 468.0 351 66.1
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.7e-125 453.8 503 49.3
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 3.2e-124 449.5 339 67.3
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.6e-118 429.9 475 49.7
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 1.3e-112 411.0 386 52.1
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.0e-109 401.4 490 44.9
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 2.9e-109 399.8 517 42.0
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.6e-107 394.0 482 44.8
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 8.2e-104 381.7 491 43.0
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 1.1e-100 371.3 293 65.2
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 1.6e-99 367.5 448 47.3
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 2.5e-97 360.1 355 54.6
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 5.0e-93 345.9 484 38.6
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 4.8e-72 276.2 476 36.1
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 1.3e-56 224.9 269 44.6
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.9e-52 211.1 482 31.7
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 1.7e-48 198.0 287 42.5
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 6.2e-43 179.5 245 44.5
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.0e-41 174.5 242 38.8
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 1.3e-40 171.8 506 30.0
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.2e-39 167.2 162 54.9
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.2e-38 165.2 162 53.7
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 1.3e-21 108.6 817 19.8
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 5.1e-21 106.7 246 34.6
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 6.6e-21 106.3 114 50.0
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 8.7e-21 105.9 91 52.7
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 7.6e-17 92.8 116 43.1
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 4.6e-14 83.6 85 56.5
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.7e-13 79.3 86 47.7
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 8.7e-13 79.3 67 61.2
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 3.8e-08 63.9 48 60.4
CSS0016884 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.4e-07 62.0 69 43.5
CSS0037496 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.4e-07 62.0 69 43.5


User provided reference genes

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