Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 3.9e-134 481.5 244 100.0
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 5.3e-67 258.5 219 61.2
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 3.4e-66 255.8 219 60.7
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 5.9e-66 255.0 219 60.7
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 1.1e-61 240.7 167 70.1
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 1.1e-59 234.2 167 67.7
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 1.7e-57 226.9 170 65.9
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 8.5e-57 224.6 161 69.6
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 4.2e-56 222.2 175 60.6
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 1.2e-55 220.7 169 62.7
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.2e-55 220.7 208 58.2
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.0e-54 217.6 210 57.1
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.2e-53 214.2 234 49.6
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 1.2e-53 214.2 175 62.3
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 1.5e-53 213.8 220 55.9
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 1.5e-53 213.8 205 57.6
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 5.7e-53 211.8 170 59.4
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 7.5e-53 211.5 162 64.2
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 9.7e-53 211.1 178 60.7
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 1.3e-52 210.7 203 54.2
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 2.2e-52 209.9 165 61.2
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 2.2e-52 209.9 162 62.3
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 2.8e-52 209.5 196 55.6
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 6.3e-52 208.4 201 55.7
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 8.2e-52 208.0 164 63.4
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 8.2e-52 208.0 162 61.1
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 1.1e-51 207.6 207 52.7
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.8e-51 206.8 200 55.5
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 3.1e-51 206.1 210 53.8
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 4.1e-51 205.7 157 64.3
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 5.3e-51 205.3 162 58.0
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 5.3e-51 205.3 162 58.0
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 5.3e-51 205.3 176 59.7
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 1.6e-50 203.8 164 62.8
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 2.0e-50 203.4 201 52.7
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.0e-50 203.4 201 52.7
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 3.5e-50 202.6 170 59.4
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 7.7e-50 201.4 164 57.3
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 7.7e-50 201.4 182 57.1
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.3e-49 200.7 201 52.2
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 1.3e-49 200.7 159 60.4
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 2.2e-49 199.9 161 62.7
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 2.9e-49 199.5 219 50.7
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 6.5e-49 198.4 179 58.1
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 8.5e-49 198.0 163 60.1
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 8.5e-49 198.0 210 51.9
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 8.5e-49 198.0 219 50.2
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 1.1e-48 197.6 167 59.3
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 1.1e-48 197.6 169 56.8
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.2e-48 196.1 198 52.0
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 3.2e-48 196.1 155 61.9
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 4.2e-48 195.7 175 54.3
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 4.2e-48 195.7 187 55.1
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 5.5e-48 195.3 167 55.1
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 7.2e-48 194.9 223 51.6
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 1.6e-47 193.7 219 48.9
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 2.1e-47 193.4 176 55.1
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 2.7e-47 193.0 199 51.3
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 2.3e-46 189.9 179 52.0
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 3.0e-46 189.5 186 51.6
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 4.0e-46 189.1 184 50.0
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 6.8e-46 188.3 173 53.8
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 9.8e-45 184.5 162 56.2
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 2.8e-44 183.0 182 53.3
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 3.7e-44 182.6 195 49.2
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 3.7e-44 182.6 162 55.6
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 1.4e-43 180.6 175 54.9
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 5.4e-43 178.7 168 53.0
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 5.4e-43 178.7 184 56.0
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 9.1e-43 177.9 174 50.6
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 9.1e-43 177.9 174 50.6
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 9.1e-43 177.9 168 52.4
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 1.2e-42 177.6 168 53.6
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 1.6e-42 177.2 168 52.4
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 2.0e-42 176.8 168 53.6
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 2.0e-42 176.8 168 52.4
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 4.5e-42 175.6 192 51.0
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 5.9e-42 175.3 161 55.9
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 2.9e-41 172.9 167 50.9
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 3.8e-41 172.6 168 52.4
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 1.9e-40 170.2 186 48.4
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 3.3e-40 169.5 155 53.5
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 4.2e-40 169.1 161 50.3
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 4.7e-39 165.6 137 59.9
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 6.1e-39 165.2 157 51.0
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 6.1e-39 165.2 128 64.1
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 1.4e-38 164.1 167 49.7
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 1.8e-38 163.7 165 52.1
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 2.3e-38 163.3 178 49.4
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 1.7e-36 157.1 192 49.5
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 2.2e-36 156.8 294 36.7
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 3.7e-36 156.0 165 47.3
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 6.3e-36 155.2 142 52.8
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 1.1e-32 144.4 173 46.8
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 1.5e-32 144.1 156 48.1
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 2.8e-31 139.8 191 41.4
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 4.0e-30 136.0 136 52.2
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 5.2e-30 135.6 156 49.4
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 4.1e-27 125.9 125 52.8
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 6.8e-22 108.6 122 50.8
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 8.3e-20 101.7 96 56.2
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 4.1e-19 99.4 168 33.3
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 1.0e-17 94.7 105 49.5
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 1.2e-10 71.2 51 54.9
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 3.5e-10 69.7 87 42.5
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 8.6e-09 65.1 41 68.3


User provided reference genes

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