Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23609 Nelumbo nucifera HOM05D004692 ORTHO05D006291 1.2e-230 802.7 379 100.0
Dinv36841 Davidia involucrata HOM05D004692 ORTHO05D006291 3.8e-189 664.8 371 82.7
CiPaw.15G118000 Carya illinoinensis HOM05D004692 ORTHO05D006291 1.6e-187 659.4 371 82.5
vmacro17655 Vaccinium macrocarpon HOM05D004692 ORTHO05D006291 8.0e-187 657.1 371 81.4
QL10p021836 Quercus lobata HOM05D004692 ORTHO05D006291 2.6e-185 652.1 375 79.7
Hma1.2p1_0744F.1_g211680 Hydrangea macrophylla HOM05D004692 ORTHO05D006291 3.4e-185 651.7 371 80.1
Rhsim08G0150000 Rhododendron simsii HOM05D004692 ORTHO05D006291 5.7e-185 651.0 371 81.4
QL10p021731 Quercus lobata HOM05D004692 ORTHO05D006291 8.3e-184 647.1 375 79.7
Actinidia01418 Actinidia chinensis HOM05D004692 ORTHO05D006291 1.1e-183 646.7 381 79.0
Prupe.5G211900 Prunus persica HOM05D004692 ORTHO05D006291 1.1e-183 646.7 372 80.6
Lj5A139T82 Lonicera japonica HOM05D004692 ORTHO05D006291 1.8e-183 646.0 373 80.4
GSVIVG01008185001 Vitis vinifera HOM05D004692 ORTHO05D006291 5.4e-183 644.4 371 81.1
CSS0001909 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.2e-182 643.3 371 79.2
Ciclev10020592m.g Citrus clementina HOM05D004692 ORTHO05D006291 2.7e-182 642.1 371 80.1
CSS0041638 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 7.7e-182 640.6 371 79.0
MD14G1218000 Malus domestica HOM05D004692 ORTHO05D006291 5.0e-181 637.9 372 78.5
Aqoxy3G00609 Aquilegia oxysepala HOM05D004692 ORTHO05D006291 6.5e-181 637.5 371 78.7
MBI14_g16236_MAGBIO Magnolia biondii HOM05D004692 ORTHO05D006291 2.5e-180 635.6 371 80.1
RcHm_v2.0_Chr7g0184081 Rosa chinensis HOM05D004692 ORTHO05D006291 3.2e-180 635.2 370 78.6
Manes.01G023900 Manihot esculenta HOM05D004692 ORTHO05D006291 1.2e-179 633.3 372 79.6
DCAR_015116 Daucus carota HOM05D004692 ORTHO05D006291 2.8e-179 632.1 373 78.8
Potri.015G055300 Populus trichocarpa HOM05D004692 ORTHO05D006291 4.7e-179 631.3 371 77.1
Atru.chr9.678 Acer truncatum HOM05D004692 ORTHO05D006291 6.1e-179 630.9 371 79.5
MD06G1207500 Malus domestica HOM05D004692 ORTHO05D006291 8.0e-179 630.6 372 77.7
TWI81G0688 Tripterygium wilfordii HOM05D004692 ORTHO05D006291 8.0e-179 630.6 372 77.7
Oeu058039.1 Olea europaea HOM05D004692 ORTHO05D006291 1.0e-178 630.2 371 77.6
CAN.G471.4 Capsicum annuum HOM05D004692 ORTHO05D006291 2.3e-178 629.0 372 77.2
MELO3C017264.2 Cucumis melo HOM05D004692 ORTHO05D006291 2.3e-178 629.0 371 77.6
PSO017G3616 Papaver somniferum HOM05D004692 ORTHO05D006291 3.0e-178 628.6 371 77.4
HanXRQChr16g0501991 Helianthus annuus HOM05D004692 ORTHO05D006291 1.2e-177 626.7 372 77.4
ATR0691G179 Amborella trichopoda HOM05D004692 ORTHO05D006291 1.5e-177 626.3 370 74.9
Cc04_g07930 Coffea canephora HOM05D004692 ORTHO05D006291 2.0e-177 625.9 373 76.7
Lsat_1_v5_gn_4_112840 Lactuca sativa HOM05D004692 ORTHO05D006291 2.6e-177 625.5 372 78.8
DCAR_015115 Daucus carota HOM05D004692 ORTHO05D006291 3.4e-177 625.2 373 77.7
Nitab4.5_0007617g0010 Nicotiana tabacum HOM05D004692 ORTHO05D006291 4.4e-177 624.8 380 76.3
Solyc12g038970.3 Solanum lycopersicum HOM05D004692 ORTHO05D006291 4.4e-177 624.8 372 76.3
CsaV3_1G003170 Cucumis sativus L. HOM05D004692 ORTHO05D006291 7.5e-177 624.0 371 77.1
Glyma.17G083400 Glycine max HOM05D004692 ORTHO05D006291 1.7e-176 622.9 374 75.7
Sopen12g019180 Solanum pennellii HOM05D004692 ORTHO05D006291 1.7e-176 622.9 372 76.1
FAN13G2141 Fragaria x ananassa HOM05D004692 ORTHO05D006291 2.8e-176 622.1 370 77.0
ClCG06G015290 Citrullus lanatus HOM05D004692 ORTHO05D006291 3.7e-176 621.7 374 76.2
Phvul.003G180900 Phaseolus vulgaris HOM05D004692 ORTHO05D006291 3.7e-176 621.7 372 76.1
EL10Ac5g11213 Beta vulgaris HOM05D004692 ORTHO05D006291 4.9e-176 621.3 371 76.8
Peaxi162Scf00119g00017 Petunia axillaris HOM05D004692 ORTHO05D006291 4.9e-176 621.3 373 76.1
Hund09975 Selenicereus undatus HOM05D004692 ORTHO05D006291 6.3e-176 620.9 371 76.5
AUR62036914 Chenopodium quinoa HOM05D004692 ORTHO05D006291 8.3e-176 620.5 371 77.6
PGSC0003DMG400000653 Solanum tuberosum HOM05D004692 ORTHO05D006291 1.1e-175 620.2 372 76.1
AUR62032158 Chenopodium quinoa HOM05D004692 ORTHO05D006291 4.1e-175 618.2 372 77.4
PSO478G1466 Papaver somniferum HOM05D004692 ORTHO05D006291 1.6e-174 616.3 371 76.0
Sed0023319 Sechium edule HOM05D004692 ORTHO05D006291 1.6e-174 616.3 371 75.7
CDE06G1750 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 2.0e-174 615.9 374 75.1
Ah.11g047310 Amaranthus hybridus HOM05D004692 ORTHO05D006291 3.5e-174 615.1 371 77.1
arahy.Tifrunner.gnm1.ann1.F96WR3 Arachis hypogaea HOM05D004692 ORTHO05D006291 3.5e-174 615.1 372 76.1
Gohir.A07G057600 Gossypium hirsutum HOM05D004692 ORTHO05D006291 3.5e-174 615.1 371 76.0
arahy.Tifrunner.gnm1.ann1.51KNRK Arachis hypogaea HOM05D004692 ORTHO05D006291 1.0e-173 613.6 371 76.0
Ca_21742_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.3e-173 613.2 372 75.0
FvH4_5g13050 Fragaria vesca HOM05D004692 ORTHO05D006291 1.3e-173 613.2 370 76.2
FAN18G3467 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.7e-173 612.8 370 76.2
Gohir.D07G062400 Gossypium hirsutum HOM05D004692 ORTHO05D006291 1.7e-173 612.8 371 75.7
PGR083G2684 Punica granatum HOM05D004692 ORTHO05D006291 1.7e-173 612.8 370 75.4
Ah.02g120970 Amaranthus hybridus HOM05D004692 ORTHO05D006291 6.6e-173 610.9 371 76.8
Hund09942 Selenicereus undatus HOM05D004692 ORTHO05D006291 8.6e-173 610.5 395 72.4
CDE07G1308 Ceratophyllum demersum HOM05D004692 ORTHO05D006291 1.1e-172 610.1 373 74.3
Psat4g044040 Pisum sativum HOM05D004692 ORTHO05D006291 1.5e-172 609.8 372 75.0
Migut.J01255 Erythranthe guttata HOM05D004692 ORTHO05D006291 2.5e-172 609.0 374 74.1
Gorai.001G065900 Gossypium raimondii HOM05D004692 ORTHO05D006291 3.3e-172 608.6 372 75.5
MSTRG.22946 Avicennia marina HOM05D004692 ORTHO05D006291 9.5e-172 607.1 373 74.3
ECA232G0381 Erigeron canadensis HOM05D004692 ORTHO05D006291 1.2e-171 606.7 372 74.7
Lj4g0008523 Lotus japonicus HOM05D004692 ORTHO05D006291 1.2e-171 606.7 372 74.5
CANSAT80G0730 Cannabis sativa HOM05D004692 ORTHO05D006291 1.6e-171 606.3 370 74.9
arahy.Tifrunner.gnm1.ann1.6286TX Arachis hypogaea HOM05D004692 ORTHO05D006291 2.8e-171 605.5 380 74.5
THA.LOC104819389 Tarenaya hassleriana HOM05D004692 ORTHO05D006291 4.7e-171 604.7 372 74.5
Medtr4g112810 Medicago truncatula HOM05D004692 ORTHO05D006291 1.8e-170 602.8 372 72.8
TPR.G2028 Trifolium pratense HOM05D004692 ORTHO05D006291 1.8e-170 602.8 371 73.3
Lalb_Chr13g0302611 Lupinus albus HOM05D004692 ORTHO05D006291 6.8e-170 600.9 365 74.8
Actinidia10430 Actinidia chinensis HOM05D004692 ORTHO05D006291 8.3e-168 594.0 378 75.4
Sc12g0006990 Simmondsia chinensis HOM05D004692 ORTHO05D006291 1.2e-166 590.1 371 72.5
HPP92_019130 Vanilla planifolia HOM05D004692 ORTHO05D006291 3.5e-166 588.6 376 70.5
arahy.Tifrunner.gnm1.ann1.RJWR3V Arachis hypogaea HOM05D004692 ORTHO05D006291 5.9e-166 587.8 371 73.6
Eucgr.B00659 Eucalyptus grandis HOM05D004692 ORTHO05D006291 2.3e-165 585.9 369 72.9
VMungo1215G1525 Vigna mungo HOM05D004692 ORTHO05D006291 3.9e-165 585.1 372 73.4
A10p28500 Brassica napus HOM05D004692 ORTHO05D006291 5.0e-165 584.7 372 71.8
SalBow5G2075 Salvia bowleyana HOM05D004692 ORTHO05D006291 5.0e-165 584.7 381 71.7
TAR374G0590 Trochodendron aralioides HOM05D004692 ORTHO05D006291 6.6e-165 584.3 328 82.6
Thecc.03G112800 Theobroma cacao HOM05D004692 ORTHO05D006291 1.5e-164 583.2 371 73.6
BcaB08g37277 Brassica carinata HOM05D004692 ORTHO05D006291 1.2e-163 580.1 373 72.4
C09p68780 Brassica napus HOM05D004692 ORTHO05D006291 1.2e-163 580.1 373 72.1
C03p04140 Brassica napus HOM05D004692 ORTHO05D006291 1.6e-163 579.7 365 72.9
Thhalv10013807m.g Eutrema salsugineum HOM05D004692 ORTHO05D006291 1.6e-163 579.7 372 71.2
Sabra15G0080100 Salix brachista HOM05D004692 ORTHO05D006291 2.1e-163 579.3 460 62.0
Sp6g34780 Schrenkiella parvula HOM05D004692 ORTHO05D006291 2.1e-163 579.3 365 73.2
Carub.0006s0707 Capsella rubella HOM05D004692 ORTHO05D006291 6.2e-163 577.8 365 73.2
FAN08G1512 Fragaria x ananassa HOM05D004692 ORTHO05D006291 6.2e-163 577.8 347 76.7
SHI18993 Sapria himalayana HOM05D004692 ORTHO05D006291 6.2e-163 577.8 402 68.2
BolC3t12946H Brassica oleracea HOM05D004692 ORTHO05D006291 1.1e-162 577.0 366 72.4
AL6G18560 Arabidopsis lyrata HOM05D004692 ORTHO05D006291 2.3e-162 575.9 372 72.6
A03p03660 Brassica napus HOM05D004692 ORTHO05D006291 3.1e-162 575.5 366 71.9
SGA_v2.0_scaffold56G20037 Striga asiatica HOM05D004692 ORTHO05D006291 4.0e-162 575.1 356 73.6
BcaNung05091 Brassica carinata HOM05D004692 ORTHO05D006291 5.2e-162 574.7 367 71.4
HanXRQChr16g0501981 Helianthus annuus HOM05D004692 ORTHO05D006291 1.5e-161 573.2 423 66.2
AT5G08170 Arabidopsis thaliana HOM05D004692 ORTHO05D006291 2.0e-161 572.8 372 72.0
BraA03t09714Z Brassica rapa HOM05D004692 ORTHO05D006291 2.0e-161 572.8 366 71.3
Duzib205G0043 Durio zibethinus HOM05D004692 ORTHO05D006291 3.4e-161 572.0 375 72.3
Aa31LG3G18370 Aethionema arabicum HOM05D004692 ORTHO05D006291 4.4e-161 571.6 402 66.4
Os04g0466600 Oryza sativa ssp. japonica HOM05D004692 ORTHO05D006291 2.4e-159 565.8 371 69.3
HPP92_019140 Vanilla planifolia HOM05D004692 ORTHO05D006291 7.8e-158 560.8 364 69.5
Nitab4.5_0000208g0050 Nicotiana tabacum HOM05D004692 ORTHO05D006291 5.6e-156 554.7 406 66.7
Pp3c14_21790 Physcomitrium patens HOM05D004692 ORTHO05D006291 3.1e-154 548.9 373 67.3
BraA10t44898Z Brassica rapa HOM05D004692 ORTHO05D006291 1.2e-153 547.0 371 68.2
BolC9t59625H Brassica oleracea HOM05D004692 ORTHO05D006291 2.0e-153 546.2 372 69.1
unitig_26.g9673 Utricularia gibba HOM05D004692 ORTHO05D006291 2.6e-153 545.8 372 66.4
SMO115G0272 Selaginella moellendorffii HOM05D004692 ORTHO05D006291 4.4e-153 545.0 365 69.0
Mapoly0016s0188 Marchantia polymorpha HOM05D004692 ORTHO05D006291 2.2e-152 542.7 374 65.5
AagrBONN_evm.TU.Sc2ySwM_117.2364 Anthoceros agrestis HOM05D004692 ORTHO05D006291 4.6e-150 535.0 374 65.5
BcaB01g05624 Brassica carinata HOM05D004692 ORTHO05D006291 1.8e-146 523.1 369 67.5
Zm00001eb424480 Zea mays HOM05D004692 ORTHO05D006291 1.7e-144 516.5 417 60.9
Haze_18550 Corylus avellana HOM05D004692 ORTHO05D006291 2.4e-143 512.7 308 78.6
Ca_25716_v3 Cicer arietinum L. HOM05D004692 ORTHO05D006291 1.7e-136 490.0 292 74.0
CBR_g22406 Chara braunii HOM05D004692 ORTHO05D006291 8.4e-136 487.6 387 60.5
arahy.Tifrunner.gnm1.ann1.U185V9 Arachis hypogaea HOM05D004692 ORTHO05D006291 4.5e-129 465.3 371 62.3
CARHR205010 Cardamine hirsuta HOM05D004692 ORTHO05D006291 5.8e-121 438.3 260 77.3
Medtr4g110140 Medicago truncatula HOM05D004692 ORTHO05D006291 2.2e-107 393.3 389 52.7
Cfa019856 Carpinus fangiana HOM05D004692 ORTHO05D006291 4.6e-102 375.6 341 56.9
CSS0041488 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 2.4e-98 363.2 249 69.1
Sc12g0006960 Simmondsia chinensis HOM05D004692 ORTHO05D006291 8.5e-96 354.8 214 75.7
CSS0018290 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.4e-95 354.0 229 72.1
CSS0026593 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 1.1e-92 344.4 220 72.3
Pp3c13_22750 Physcomitrium patens HOM05D004692 ORTHO05D006291 1.3e-88 330.9 384 45.1
Cre01.g009350 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 5.2e-85 318.9 378 44.2
CSS0021853 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 6.7e-85 318.5 194 74.7
Hund10163 Selenicereus undatus HOM05D004692 ORTHO05D006291 7.4e-84 315.1 371 45.8
PRCOL_00005028 Prasinoderma coloniale HOM05D004692 ORTHO05D006291 8.2e-83 311.6 400 42.8
CSS0048768 Camellia sinensis var. sinensis HOM05D004692 ORTHO05D006291 3.6e-78 296.2 165 78.2
Cpa.g.c37454 Carica papaya HOM05D004692 ORTHO05D006291 3.8e-72 276.2 170 75.3
Lsat_1_v5_gn_5_119361 Lactuca sativa HOM05D004692 ORTHO05D006291 1.6e-62 244.2 171 71.3
Cre01.g053300 Chlamydomonas reinhardtii HOM05D004692 ORTHO05D006291 5.2e-45 186.0 472 28.2
Cpa.g.c37318 Carica papaya HOM05D004692 ORTHO05D006291 2.4e-42 177.2 91 83.5
FAN04G1239 Fragaria x ananassa HOM05D004692 ORTHO05D006291 1.7e-35 154.5 128 60.9
C05p13090 Brassica napus HOM05D004692 ORTHO05D006291 1.6e-30 137.9 107 63.6
BcaC05g25434 Brassica carinata HOM05D004692 ORTHO05D006291 8.1e-30 135.6 107 62.6
Ca_29974_v3 Cicer arietinum L. HOM05D000837 ORTHO05D008386 2.6e-28 130.6 76 78.9
Lsat_1_v5_gn_3_89601 Lactuca sativa HOM05D004692 ORTHO05D006291 4.2e-26 123.2 92 69.6
CDE06G1955 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 1.2e-25 121.7 336 28.6
RcHm_v2.0_Chr2g0128461 Rosa chinensis HOM05D004692 ORTHO05D019764 2.3e-16 90.9 162 34.0
RcHm_v2.0_Chr4g0407261 Rosa chinensis HOM05D004692 ORTHO05D019764 1.3e-14 85.1 156 34.6
SGA_v2.0_scaffold26G11385 Striga asiatica HOM05D004692 ORTHO05D019764 1.1e-13 82.0 47 76.6
arahy.Tifrunner.gnm1.ann1.5N8491 Arachis hypogaea HOM05D004692 ORTHO05D019764 1.4e-13 81.6 46 78.3
RcHm_v2.0_Chr2g0129061 Rosa chinensis HOM05D004692 ORTHO05D006291 2.4e-13 80.9 43 83.7
RcHm_v2.0_Chr2g0164691 Rosa chinensis HOM05D004692 ORTHO05D019764 2.6e-12 77.4 39 87.2
Haze_18551 Corylus avellana HOM05D016865 ORTHO05D022463 4.3e-07 60.1 30 70.0
CDE07G1693 Ceratophyllum demersum HOM05D004692 ORTHO05D019764 2.8e-06 57.4 44 63.6


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