Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23085 Nelumbo nucifera HOM05D003823 ORTHO05D004866 6.8e-110 400.6 192 100.0
Nn8g40950 Nelumbo nucifera HOM05D003823 ORTHO05D004866 2.0e-109 399.1 192 99.5
MBI02_g36598_MAGBIO Magnolia biondii HOM05D003823 ORTHO05D004866 4.6e-106 387.9 192 96.9
PSO017G2864 Papaver somniferum HOM05D003823 ORTHO05D004866 5.6e-104 380.9 190 96.8
TAR374G1522 Trochodendron aralioides HOM05D003823 ORTHO05D004866 5.6e-104 380.9 186 98.4
Glyma.02G268600 Glycine max HOM05D003823 ORTHO05D004866 7.3e-104 380.6 192 93.8
VMungo0647G1166 Vigna mungo HOM05D003823 ORTHO05D004866 9.5e-104 380.2 192 93.2
GSVIVG01020043001 Vitis vinifera HOM05D003823 ORTHO05D004866 9.5e-104 380.2 192 95.8
Phvul.008G213700 Phaseolus vulgaris HOM05D003823 ORTHO05D004866 1.2e-103 379.8 192 92.7
Zm00001eb203950 Zea mays HOM05D003823 ORTHO05D004866 1.2e-103 379.8 188 96.3
PSO478G3470 Papaver somniferum HOM05D003823 ORTHO05D004866 1.6e-103 379.4 190 96.3
Os02g0265400 Oryza sativa ssp. japonica HOM05D003823 ORTHO05D004866 2.1e-103 379.0 189 95.2
Aqoxy3G03322 Aquilegia oxysepala HOM05D003823 ORTHO05D004866 3.6e-103 378.3 192 95.8
TAR622G1107 Trochodendron aralioides HOM05D003823 ORTHO05D004866 3.6e-103 378.3 188 96.3
Cfa018968 Carpinus fangiana HOM05D000046 ORTHO05D004866 6.2e-103 377.5 193 94.3
CANSAT80G0583 Cannabis sativa HOM05D003823 ORTHO05D004866 8.1e-103 377.1 194 93.8
Duzib268G0082 Durio zibethinus HOM05D003823 ORTHO05D004866 1.1e-102 376.7 192 93.8
ATR0564G299 Amborella trichopoda HOM05D003823 ORTHO05D004866 1.4e-102 376.3 188 96.3
Cpa.g.sc388.5 Carica papaya HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 92.7
FvH4_5g15250 Fragaria vesca HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 93.2
FAN04G0558 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 93.2
FAN08G0194 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 93.2
FAN13G2005 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 93.2
FAN18G4237 Fragaria x ananassa HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 93.2
Glyma.14G048800 Glycine max HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 92.7
Prupe.5G189200 Prunus persica HOM05D003823 ORTHO05D004866 1.8e-102 375.9 192 93.2
AUR62027457 Chenopodium quinoa HOM05D003823 ORTHO05D004866 3.1e-102 375.2 192 92.7
AUR62031242 Chenopodium quinoa HOM05D003823 ORTHO05D004866 3.1e-102 375.2 192 92.7
Ca_16285_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 3.1e-102 375.2 192 92.2
Gohir.A12G166100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.1e-102 375.2 192 92.7
COL.COLO4_22965 Corchorus olitorius HOM05D003823 ORTHO05D004866 5.2e-102 374.4 192 92.2
Potri.001G354000 Populus trichocarpa HOM05D003823 ORTHO05D004866 5.2e-102 374.4 193 93.8
TPR.G25673 Trifolium pratense HOM05D003823 ORTHO05D004866 6.8e-102 374.0 187 94.7
Actinidia02709 Actinidia chinensis HOM05D003823 ORTHO05D004866 8.9e-102 373.6 194 92.8
Cc07_g03190 Coffea canephora HOM05D003823 ORTHO05D004866 8.9e-102 373.6 194 92.3
Dinv06526 Davidia involucrata HOM05D003823 ORTHO05D004866 8.9e-102 373.6 187 95.2
Duzib251G0021 Durio zibethinus HOM05D003823 ORTHO05D004866 8.9e-102 373.6 192 92.7
MD06G1190100 Malus domestica HOM05D003823 ORTHO05D004866 8.9e-102 373.6 193 93.3
MD14G1197000 Malus domestica HOM05D003823 ORTHO05D004866 8.9e-102 373.6 193 93.3
PGR083G1126 Punica granatum HOM05D003823 ORTHO05D004866 8.9e-102 373.6 192 94.3
Psat5g111480 Pisum sativum HOM05D003823 ORTHO05D004866 1.5e-101 372.9 192 92.2
RcHm_v2.0_Chr7g0180841 Rosa chinensis HOM05D003823 ORTHO05D004866 1.5e-101 372.9 193 93.3
Ciclev10022411m.g Citrus clementina HOM05D003823 ORTHO05D004866 2.0e-101 372.5 192 92.2
Lsat_1_v5_gn_2_88881 Lactuca sativa HOM05D003823 ORTHO05D004866 2.0e-101 372.5 187 94.7
Manes.05G098825 Manihot esculenta HOM05D003823 ORTHO05D004866 2.0e-101 372.5 192 92.2
Psat2g025840 Pisum sativum HOM05D003823 ORTHO05D004866 2.0e-101 372.5 187 94.1
Potri.011G077900 Populus trichocarpa HOM05D003823 ORTHO05D004866 2.0e-101 372.5 193 92.7
vmacro18202 Vaccinium macrocarpon HOM05D003823 ORTHO05D004866 2.0e-101 372.5 186 95.2
Ca_06062_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 2.6e-101 372.1 187 94.7
Ca_30714_v3 Cicer arietinum L. HOM05D003823 ORTHO05D004866 2.6e-101 372.1 187 94.7
Thecc.02G351700 Theobroma cacao HOM05D003823 ORTHO05D004866 2.6e-101 372.1 192 92.2
Cc04_g17180 Coffea canephora HOM05D003823 ORTHO05D004866 3.4e-101 371.7 193 92.7
Gohir.A11G029891 Gossypium hirsutum HOM05D003823 ORTHO05D004866 3.4e-101 371.7 193 93.8
CSS0031728 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.4e-101 371.3 186 95.2
CSS0041610 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.4e-101 371.3 186 95.2
CSS0049183 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 4.4e-101 371.3 186 95.2
CiPaw.11G041500 Carya illinoinensis HOM05D003823 ORTHO05D004866 4.4e-101 371.3 188 93.6
Gohir.D12G169500 Gossypium hirsutum HOM05D003823 ORTHO05D004866 4.4e-101 371.3 192 92.7
Medtr5g085380 Medicago truncatula HOM05D003823 ORTHO05D004866 4.4e-101 371.3 187 93.6
Medtr3g080480 Medicago truncatula HOM05D003823 ORTHO05D004866 5.8e-101 370.9 192 91.7
Sabra16G0232900 Salix brachista HOM05D003823 ORTHO05D004866 5.8e-101 370.9 193 92.7
Atru.chr11.1839 Acer truncatum HOM05D003823 ORTHO05D004866 7.6e-101 370.5 192 92.7
Rhsim08G0068000 Rhododendron simsii HOM05D003823 ORTHO05D004866 7.6e-101 370.5 197 90.4
HPP92_020326 Vanilla planifolia HOM05D003823 ORTHO05D004866 7.6e-101 370.5 197 89.8
Dinv38684 Davidia involucrata HOM05D003823 ORTHO05D004866 9.9e-101 370.2 192 93.2
HanXRQChr02g0056361 Helianthus annuus HOM05D003823 ORTHO05D004866 9.9e-101 370.2 187 93.6
HanXRQChr14g0449901 Helianthus annuus HOM05D003823 ORTHO05D004866 9.9e-101 370.2 187 93.0
EL10Ac8g19266 Beta vulgaris HOM05D003823 ORTHO05D004866 1.3e-100 369.8 192 91.7
Ciclev10032832m.g Citrus clementina HOM05D003823 ORTHO05D004866 1.3e-100 369.8 192 92.7
Lalb_Chr25g0280071 Lupinus albus HOM05D003823 ORTHO05D004866 1.3e-100 369.8 190 92.6
Gohir.D11G033300 Gossypium hirsutum HOM05D003823 ORTHO05D004866 1.7e-100 369.4 193 93.3
Gorai.007G036100 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.7e-100 369.4 193 93.3
QL10p016165 Quercus lobata HOM05D003823 ORTHO05D004866 1.7e-100 369.4 187 93.6
Hund02662 Selenicereus undatus HOM05D003823 ORTHO05D004866 1.7e-100 369.4 193 90.7
CDE02G3183 Ceratophyllum demersum HOM05D003823 ORTHO05D004866 2.9e-100 368.6 185 94.6
ClCG06G016300 Citrullus lanatus HOM05D003823 ORTHO05D004866 2.9e-100 368.6 192 92.2
MELO3C017163.2 Cucumis melo HOM05D003823 ORTHO05D004866 2.9e-100 368.6 192 92.2
CsaV3_1G002230 Cucumis sativus L. HOM05D003823 ORTHO05D004866 2.9e-100 368.6 192 92.2
ECA238G0538 Erigeron canadensis HOM05D003823 ORTHO05D004866 2.9e-100 368.6 187 92.5
PGSC0003DMG400018144 Solanum tuberosum HOM05D003823 ORTHO05D004866 2.9e-100 368.6 186 94.6
Actinidia37644 Actinidia chinensis HOM05D003823 ORTHO05D004866 3.8e-100 368.2 192 91.1
TWI60G1055 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 3.8e-100 368.2 190 92.6
Gorai.008G182100 Gossypium raimondii HOM05D003823 ORTHO05D004866 4.9e-100 367.9 192 91.7
Manes.14G076100 Manihot esculenta HOM05D003823 ORTHO05D004866 4.9e-100 367.9 193 92.2
Thecc.03G082400 Theobroma cacao HOM05D003823 ORTHO05D004866 4.9e-100 367.9 193 93.3
SalBow6G5762 Salvia bowleyana HOM05D003823 ORTHO05D004866 6.4e-100 367.5 189 92.1
Lj4g0027914 Lotus japonicus HOM05D003823 ORTHO05D004866 8.4e-100 367.1 187 92.5
Solyc03g113020.3 Solanum lycopersicum HOM05D003823 ORTHO05D004866 1.1e-99 366.7 186 93.5
Sopen03g032100 Solanum pennellii HOM05D003823 ORTHO05D004866 1.1e-99 366.7 186 93.5
Atru.chr4.927 Acer truncatum HOM05D003823 ORTHO05D004866 1.4e-99 366.3 192 92.2
Nitab4.5_0000785g0070 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-99 366.3 189 92.6
Nitab4.5_0010010g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 1.4e-99 366.3 189 92.6
TWI81G0804 Tripterygium wilfordii HOM05D003823 ORTHO05D004866 1.4e-99 366.3 189 92.6
Eucgr.K02462 Eucalyptus grandis HOM05D003823 ORTHO05D004866 1.9e-99 365.9 211 84.8
Sed0017565 Sechium edule HOM05D003823 ORTHO05D004866 1.9e-99 365.9 187 93.0
Sc12g0006240 Simmondsia chinensis HOM05D003823 ORTHO05D004866 2.4e-99 365.5 186 93.0
THA.LOC104819434 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 2.4e-99 365.5 192 90.1
TPR.G29042 Trifolium pratense HOM05D003823 ORTHO05D004866 2.4e-99 365.5 192 90.6
CAN.G1305.7 Capsicum annuum HOM05D003823 ORTHO05D004866 3.2e-99 365.2 189 91.5
Zm00001eb237810 Zea mays HOM05D003823 ORTHO05D004866 5.4e-99 364.4 186 93.5
BcaB01g00874 Brassica carinata HOM05D003823 ORTHO05D004866 7.1e-99 364.0 190 90.5
Migut.D02333 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.2e-98 363.2 184 92.9
BcaC01g01774 Brassica carinata HOM05D003823 ORTHO05D004866 1.6e-98 362.8 190 90.0
C03p72020 Brassica napus HOM05D003823 ORTHO05D004866 1.6e-98 362.8 190 90.0
BolC3t19499H Brassica oleracea HOM05D003823 ORTHO05D004866 1.6e-98 362.8 190 90.0
Duzib084G0821 Durio zibethinus HOM05D003823 ORTHO05D004866 2.7e-98 362.1 192 90.6
Sp5g14150 Schrenkiella parvula HOM05D003823 ORTHO05D004866 2.7e-98 362.1 190 90.0
A06p19840 Brassica napus HOM05D003823 ORTHO05D004866 3.5e-98 361.7 190 90.0
BraA06t25064Z Brassica rapa HOM05D003823 ORTHO05D004866 3.5e-98 361.7 190 90.0
Peaxi162Scf00009g00217 Petunia axillaris HOM05D003823 ORTHO05D004866 3.5e-98 361.7 184 94.0
Rhsim08G0157700 Rhododendron simsii HOM05D003823 ORTHO05D004866 4.6e-98 361.3 192 90.1
MSTRG.9636 Avicennia marina HOM05D003823 ORTHO05D004866 6.0e-98 360.9 187 91.4
Thhalv10010746m.g Eutrema salsugineum HOM05D003823 ORTHO05D004866 7.8e-98 360.5 190 89.5
CARHR156490 Cardamine hirsuta HOM05D003823 ORTHO05D004866 1.0e-97 360.1 190 88.9
A06p27290 Brassica napus HOM05D003823 ORTHO05D004866 1.3e-97 359.8 190 89.5
BraA06t25670Z Brassica rapa HOM05D003823 ORTHO05D004866 1.3e-97 359.8 190 89.5
Oeu022626.1 Olea europaea HOM05D003823 ORTHO05D004866 1.3e-97 359.8 189 89.4
Aa31LG4G16460 Aethionema arabicum HOM05D003823 ORTHO05D004866 5.1e-97 357.8 190 87.9
BcaC01g02292 Brassica carinata HOM05D003823 ORTHO05D004866 5.1e-97 357.8 190 89.5
C03p66970 Brassica napus HOM05D003823 ORTHO05D004866 5.1e-97 357.8 190 89.5
BolC3t18970H Brassica oleracea HOM05D003823 ORTHO05D004866 5.1e-97 357.8 190 89.5
Migut.D02334 Erythranthe guttata HOM05D003823 ORTHO05D004866 1.1e-96 356.7 187 90.4
Sed0002791 Sechium edule HOM05D003823 ORTHO05D004866 1.1e-96 356.7 186 90.3
DCAR_026066 Daucus carota HOM05D003823 ORTHO05D004866 1.5e-96 356.3 186 90.9
Dinv19933 Davidia involucrata HOM05D003823 ORTHO05D004866 1.5e-96 356.3 193 89.6
THA.LOC104821437 Tarenaya hassleriana HOM05D003823 ORTHO05D004866 3.3e-96 355.1 190 87.4
BcaB02g10689 Brassica carinata HOM05D003823 ORTHO05D004866 1.2e-95 353.2 190 87.9
AL5G27100 Arabidopsis lyrata HOM05D003823 ORTHO05D004866 4.7e-95 351.3 190 87.4
Mapoly0081s0078 Marchantia polymorpha HOM05D003823 ORTHO05D004866 1.4e-94 349.7 183 89.6
AT3G47810 Arabidopsis thaliana HOM05D003823 ORTHO05D004866 2.4e-94 349.0 189 87.3
SMO116G0153 Selaginella moellendorffii HOM05D003823 ORTHO05D004866 6.9e-94 347.4 190 86.3
Haze_07352 Corylus avellana HOM05D003823 ORTHO05D004866 1.2e-93 346.7 259 69.9
Lj5A113G71 Lonicera japonica HOM05D003823 ORTHO05D004866 4.4e-93 344.7 189 88.4
Oeu006179.1 Olea europaea HOM05D003823 ORTHO05D004866 7.6e-93 344.0 187 87.2
Carub.0005s1392 Capsella rubella HOM05D003823 ORTHO05D004866 2.2e-92 342.4 182 89.0
Pp3c11_12990 Physcomitrium patens HOM05D003823 ORTHO05D004866 2.9e-92 342.0 183 89.1
CSS0031561 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.6e-90 336.3 184 90.2
CBR_g29439 Chara braunii HOM05D003823 ORTHO05D004866 1.5e-88 329.7 187 81.8
SGA_v2.0_scaffold193G40709 Striga asiatica HOM05D003823 ORTHO05D004866 9.6e-88 327.0 191 81.2
Pp3c7_13070 Physcomitrium patens HOM05D003823 ORTHO05D004866 2.8e-87 325.5 183 85.2
GSVIVG01008037001 Vitis vinifera HOM05D003823 ORTHO05D004866 3.4e-85 318.5 160 94.4
CSS0019545 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.6e-82 309.7 187 81.8
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 5.1e-81 304.7 153 92.8
MBI05_g00394_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000195 9.9e-77 290.4 142 95.1
QL93p0043_0002 Quercus lobata HOM05D003823 ORTHO05D004866 1.9e-75 286.2 142 94.4
SEGI_34945 Sequoiadendron giganteum HOM05D003823 ORTHO05D004866 2.1e-74 282.7 140 93.6
Nitab4.5_0012727g0030 Nicotiana tabacum HOM05D003823 ORTHO05D004866 2.5e-72 275.8 141 90.1
Actinidia17538 Actinidia chinensis HOM05D003823 ORTHO05D004866 4.0e-70 268.5 131 94.7
TAR729G0007 Trochodendron aralioides HOM05D003823 ORTHO05D004866 4.5e-69 265.0 166 79.5
CSS0004961 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.4e-67 260.0 187 72.2
Lj4A511G17 Lonicera japonica HOM05D003823 ORTHO05D004866 2.7e-66 255.8 187 71.7
Eucgr.G00164 Eucalyptus grandis HOM05D003823 ORTHO05D004866 4.6e-66 255.0 139 85.6
Manes.01G188500 Manihot esculenta HOM05D003823 ORTHO05D004866 4.6e-66 255.0 129 89.1
Eucgr.G00114 Eucalyptus grandis HOM05D003823 ORTHO05D004866 9.7e-64 247.3 154 79.2
MCO13G641 Micromonas commoda HOM05D003823 ORTHO05D004866 3.9e-57 225.3 189 54.0
Cre12.g499900 Chlamydomonas reinhardtii HOM05D003823 ORTHO05D004866 8.8e-57 224.2 190 55.8
Lj4A501G12 Lonicera japonica HOM05D003823 ORTHO05D004866 3.1e-54 215.7 167 67.7
Atru.chr9.2289 Acer truncatum HOM05D003823 ORTHO05D004866 5.1e-49 198.4 158 66.5
Gorai.007G237600 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.1e-43 180.6 91 90.1
Gohir.D02G085100 Gossypium hirsutum HOM05D003823 ORTHO05D004866 7.2e-43 177.9 116 74.1
CSS0033378 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.6e-42 176.8 91 90.1
Gohir.D06G139701 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.5e-40 170.2 88 87.5
Gohir.A08G078101 Gossypium hirsutum HOM05D003823 ORTHO05D004866 2.6e-40 169.5 104 76.9
Gorai.005G191600 Gossypium raimondii HOM05D003823 ORTHO05D004866 5.7e-40 168.3 88 86.4
Gorai.003G098000 Gossypium raimondii HOM05D003823 ORTHO05D017994 9.7e-40 167.5 88 86.4
Gorai.008G100600 Gossypium raimondii HOM05D003823 ORTHO05D004866 3.7e-39 165.6 88 86.4
Gohir.A05G198301 Gossypium hirsutum HOM05D003823 ORTHO05D004866 6.3e-39 164.9 88 85.2
Gohir.D03G122233 Gossypium hirsutum HOM05D003823 ORTHO05D004866 6.3e-39 164.9 88 85.2
CSS0038842 Camellia sinensis var. sinensis HOM05D003823 ORTHO05D004866 1.4e-38 163.7 155 56.8
Lj4g0026130 Lotus japonicus HOM05D003823 ORTHO05D004866 9.1e-38 161.0 101 80.2
Thecc.02G319100 Theobroma cacao HOM05D003823 ORTHO05D004866 1.0e-36 157.5 142 61.3
Gohir.D06G082500 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.5e-35 153.7 88 83.0
Gorai.013G138400 Gossypium raimondii HOM05D003823 ORTHO05D004866 1.2e-32 144.1 80 82.5
Sabra15G0049800 Salix brachista HOM05D003823 ORTHO05D000412 8.2e-31 137.9 70 95.7
unitig_0.g782 Utricularia gibba HOM05D003823 ORTHO05D004866 1.1e-30 137.5 70 82.9
Gohir.A01G072501 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.0e-25 120.9 63 84.1
Gohir.A05G203200 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.0e-25 120.9 63 84.1
Gohir.A10G203700 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.0e-25 120.9 63 84.1
Gohir.A12G000600 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.0e-25 120.9 63 84.1
Gohir.D06G205050 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.0e-25 120.9 63 84.1
Gohir.D08G111400 Gossypium hirsutum HOM05D003823 ORTHO05D017994 1.0e-25 120.9 63 84.1
Gorai.005G095900 Gossypium raimondii HOM05D003823 ORTHO05D218813 2.6e-16 89.7 47 87.2
Sabra15G0057900 Salix brachista HOM05D003823 ORTHO05D349330 4.4e-16 89.0 51 90.2
Duzib248G1489 Durio zibethinus HOM05D003823 ORTHO05D186086 2.7e-13 79.7 44 84.1


User provided reference genes

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