Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 2.0e-160 569.3 350 100.0
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 4.6e-120 435.3 315 85.4
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.1e-110 404.1 276 81.5
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.9e-110 403.3 299 82.9
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 2.8e-109 399.4 285 81.1
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 4.0e-108 395.6 232 87.5
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 8.9e-108 394.4 232 83.2
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 8.9e-108 394.4 242 83.1
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.0e-107 393.3 268 82.8
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 9.9e-107 391.0 242 78.5
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 1.3e-106 390.6 302 79.1
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.2e-106 389.8 242 83.5
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 6.4e-106 388.3 242 78.5
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 8.3e-106 387.9 303 80.9
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 1.2e-104 384.0 236 81.8
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 1.6e-104 383.6 307 78.8
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.6e-104 383.6 242 77.7
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 7.8e-104 381.3 297 78.5
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 7.8e-104 381.3 242 77.3
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 2.3e-103 379.8 242 82.6
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 3.0e-103 379.4 275 79.3
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 3.9e-103 379.0 275 80.0
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 3.9e-103 379.0 237 83.1
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.5e-102 376.3 242 78.5
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 3.3e-102 375.9 314 73.6
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 3.3e-102 375.9 242 81.4
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 9.5e-102 374.4 241 80.5
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.2e-101 374.0 237 82.7
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.7e-101 372.1 241 79.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.1e-100 370.9 236 80.1
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.1e-100 370.9 261 79.3
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.1e-100 370.9 241 79.7
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.8e-100 370.2 241 78.4
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 3.1e-100 369.4 316 75.0
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 4.0e-100 369.0 251 75.3
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 6.8e-100 368.2 233 82.0
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.5e-99 367.1 241 78.8
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 9.9e-99 364.4 257 81.3
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 9.9e-99 364.4 239 71.1
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 3.8e-98 362.5 300 76.3
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 6.4e-98 361.7 232 79.3
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 8.4e-98 361.3 237 81.0
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 8.4e-98 361.3 300 78.0
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 5.4e-97 358.6 304 76.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 7.1e-97 358.2 244 73.0
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 7.1e-97 358.2 237 80.2
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.2e-96 357.5 239 77.8
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.6e-96 357.1 233 78.5
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.7e-96 356.3 270 73.0
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 2.7e-96 356.3 299 76.3
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 2.7e-96 356.3 233 79.0
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 3.5e-96 355.9 235 78.7
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.5e-96 355.9 270 74.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 4.6e-96 355.5 239 77.0
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 7.8e-96 354.8 280 67.1
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 7.8e-96 354.8 233 77.3
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 3.0e-95 352.8 233 78.1
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 3.9e-95 352.4 272 75.4
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 6.6e-95 351.7 275 74.5
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 6.6e-95 351.7 275 74.5
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 8.7e-95 351.3 251 74.5
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.1e-94 350.9 275 74.5
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.1e-94 350.9 275 74.5
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 2.5e-94 349.7 276 72.1
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 3.3e-94 349.4 223 80.3
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 4.3e-94 349.0 254 73.2
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.6e-94 348.6 214 86.0
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 7.3e-94 348.2 244 73.8
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 3.4e-91 339.3 237 72.6
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 2.2e-90 336.7 317 61.2
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.1e-89 334.3 236 73.3
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.5e-86 323.9 250 70.8
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.5e-86 323.2 275 67.3
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.4e-84 317.4 236 73.3
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 2.6e-83 313.2 232 73.7
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 7.1e-81 305.1 270 62.6
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 3.9e-79 299.3 245 67.8
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 5.3e-76 288.9 214 70.6
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 5.5e-73 278.9 228 78.5
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 4.2e-65 252.7 148 89.2
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 3.5e-64 249.6 156 76.3
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 3.9e-63 246.1 163 78.5
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.2e-59 234.6 235 57.9
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 7.7e-59 231.9 237 56.5
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.6e-56 224.2 152 78.9
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 2.5e-54 216.9 148 78.4
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 3.7e-53 213.0 148 78.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 2.2e-50 203.8 130 79.2
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.8e-42 176.4 109 85.3
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 2.7e-40 170.2 179 53.6
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 4.7e-40 169.5 235 39.1
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.3e-31 140.6 116 72.4
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 5.7e-30 136.0 154 47.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.4e-28 130.6 84 85.7


User provided reference genes

Program Settings