Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g23023 Nelumbo nucifera HOM05D001937 ORTHO05D003828 2.7e-56 221.9 118 100.0
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 1.2e-32 143.3 84 91.7
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 7.3e-22 107.5 71 81.7
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 2.0e-19 99.4 86 61.6
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 1.1e-17 93.6 91 59.3
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 5.4e-17 91.3 94 57.4
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 5.4e-17 91.3 94 57.4
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 1.2e-16 90.1 94 56.4
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 3.5e-16 88.6 89 56.2
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.0e-15 87.0 110 50.9
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 1.0e-15 87.0 119 47.1
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 8.7e-15 84.0 83 56.6
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 1.9e-14 82.8 89 55.1
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 4.3e-14 81.6 120 45.8
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.1e-12 77.0 88 54.5
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 1.1e-12 77.0 115 47.0
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 6.9e-12 74.3 84 56.0
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 6.9e-12 74.3 134 41.8
Rhsim05G0102800 Rhododendron simsii HOM05D001937 ORTHO05D000007 1.2e-11 73.6 103 46.6
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 2.0e-11 72.8 108 44.4
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 2.6e-11 72.4 80 48.8
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 7.6e-11 70.9 84 50.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.3e-10 70.1 101 45.5
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 2.2e-10 69.3 93 50.5
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 3.2e-09 65.5 86 47.7
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 9.3e-09 63.9 106 41.5
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 9.3e-09 63.9 130 36.9
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 1.2e-08 63.5 91 42.9
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 1.6e-08 63.2 91 42.9
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 1.6e-08 63.2 130 36.2
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 1.6e-08 63.2 127 37.0
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 2.1e-08 62.8 129 37.2
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 4.6e-08 61.6 107 42.1
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 6.0e-08 61.2 94 48.9
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 6.0e-08 61.2 127 38.6
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 7.9e-08 60.8 157 32.5
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 1.0e-07 60.5 108 38.9
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 1.3e-07 60.1 130 33.8
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.3e-07 60.1 130 33.8
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 2.3e-07 59.3 102 39.2
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 3.0e-07 58.9 86 44.2
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 3.9e-07 58.5 127 40.2
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 3.9e-07 58.5 77 46.8
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 6.7e-07 57.8 130 34.6
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 6.7e-07 57.8 71 46.5
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 6.7e-07 57.8 127 37.0
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 8.7e-07 57.4 97 41.2
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 1.1e-06 57.0 65 52.3
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 1.5e-06 56.6 124 35.5
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 2.5e-06 55.8 83 45.8
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 2.5e-06 55.8 131 35.1
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.3e-06 55.5 130 33.1
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 3.3e-06 55.5 132 36.4
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 4.3e-06 55.1 151 31.8
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 4.3e-06 55.1 101 38.6
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 5.6e-06 54.7 130 33.1
Aqoxy3G01486 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 7.4e-06 54.3 80 45.0
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 7.4e-06 54.3 121 35.5
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 7.4e-06 54.3 89 39.3
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 9.6e-06 53.9 93 39.8


User provided reference genes

Program Settings