Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn4g22189 Nelumbo nucifera HOM05D006285 ORTHO05D007249 1.8e-93 345.9 174 100.0
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 8.0e-33 144.4 138 58.0
Nn3g16318 Nelumbo nucifera HOM05D006285 ORTHO05D007249 1.0e-32 144.1 140 61.4
COL.COLO4_20246 Corchorus olitorius HOM05D006285 ORTHO05D007249 1.4e-32 143.7 139 56.1
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 2.0e-31 139.8 138 57.2
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 1.3e-30 137.1 138 60.9
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 1.7e-30 136.7 138 55.8
Manes.08G102800 Manihot esculenta HOM05D006285 ORTHO05D007249 2.2e-30 136.3 137 56.2
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 5.4e-29 131.7 138 53.6
Gohir.A01G021000 Gossypium hirsutum HOM05D006285 ORTHO05D007249 9.1e-29 131.0 146 56.2
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 2.0e-28 129.8 139 55.4
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.5e-28 129.0 138 52.9
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 5.9e-28 128.3 141 56.0
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 5.9e-28 128.3 141 56.0
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 1.7e-27 126.7 138 52.2
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 1.7e-27 126.7 138 53.6
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 2.9e-27 125.9 141 53.2
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 3.8e-27 125.6 146 54.8
Potri.001G062500 Populus trichocarpa HOM05D006285 ORTHO05D007249 1.1e-26 124.0 139 54.0
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 4.2e-26 122.1 138 53.6
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 5.5e-26 121.7 138 52.2
Cpa.g.sc207.10 Carica papaya HOM05D006285 ORTHO05D007249 7.2e-26 121.3 138 50.7
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 1.6e-25 120.2 138 49.3
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 2.8e-25 119.4 142 54.2
Sabra01G0044900 Salix brachista HOM05D006285 ORTHO05D007249 3.6e-25 119.0 139 52.5
MD16G1127400 Malus domestica HOM05D006285 ORTHO05D007249 4.7e-25 118.6 152 48.7
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 8.0e-25 117.9 144 52.1
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 8.0e-25 117.9 140 52.1
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 1.8e-24 116.7 140 50.0
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 2.3e-24 116.3 140 50.0
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 4.0e-24 115.5 138 50.7
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 5.2e-24 115.2 157 45.2
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 1.5e-23 113.6 145 49.7
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 2.6e-23 112.8 160 46.9
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 1.7e-22 110.2 151 46.4
THA.LOC104803190 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 2.2e-22 109.8 150 44.7
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 3.7e-22 109.0 145 47.6
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 4.9e-22 108.6 143 47.6
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 8.3e-22 107.8 143 44.1
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 2.4e-21 106.3 140 47.1
PSO017G1512 Papaver somniferum HOM05D006285 ORTHO05D007249 3.1e-21 105.9 153 47.1
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 5.4e-21 105.1 141 43.3
TWI36G1029 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 5.4e-21 105.1 144 46.5
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 2.0e-20 103.2 145 43.4
PSO478G0022 Papaver somniferum HOM05D006285 ORTHO05D007249 2.7e-20 102.8 153 46.4
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 4.5e-20 102.1 138 46.4
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 4.5e-20 102.1 138 46.4
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 2.3e-19 99.8 141 45.4
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 2.9e-19 99.4 144 42.4
Aa31LG3G14440 Aethionema arabicum HOM05D006285 ORTHO05D007249 3.8e-19 99.0 136 43.4
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 1.5e-18 97.1 142 39.4
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 1.5e-18 97.1 150 40.7
CARHR200230 Cardamine hirsuta HOM05D006285 ORTHO05D007249 3.3e-18 95.9 143 41.3
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 3.3e-18 95.9 141 43.3
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 4.3e-18 95.5 142 39.4
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 7.3e-18 94.7 142 44.4
BcaNung01870 Brassica carinata HOM05D006285 ORTHO05D007249 1.2e-17 94.0 141 39.7
BcaNung01871 Brassica carinata HOM05D006285 ORTHO05D007249 1.2e-17 94.0 141 39.7
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 1.2e-17 94.0 141 39.7
BraA02t05154Z Brassica rapa HOM05D006285 ORTHO05D007249 1.2e-17 94.0 141 39.7
Oeu019430.1 Olea europaea HOM05D006285 ORTHO05D007249 1.2e-17 94.0 143 45.5
BcaNung01167 Brassica carinata HOM05D006285 ORTHO05D007249 1.6e-17 93.6 141 40.4
A02p01780 Brassica napus HOM05D006285 ORTHO05D007249 1.6e-17 93.6 141 39.7
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 2.8e-17 92.8 138 40.6
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 3.6e-17 92.4 141 39.0
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 4.7e-17 92.0 141 39.0
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 6.1e-17 91.7 139 43.2
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 8.0e-17 91.3 141 39.0
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 8.0e-17 91.3 141 39.0
Actinidia22128 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.4e-16 90.5 138 42.0
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 1.8e-16 90.1 141 39.7
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 1.8e-16 90.1 138 42.8
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 1.8e-16 90.1 138 42.8
Rhsim12G0098900 Rhododendron simsii HOM05D006285 ORTHO05D007249 1.8e-16 90.1 142 43.7
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 8.9e-16 87.8 138 42.0
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 8.9e-16 87.8 138 42.0
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 2.0e-15 86.7 140 41.4
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 3.4e-15 85.9 137 41.6
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 9.8e-15 84.3 148 39.2
MBI07_g36277_MAGBIO Magnolia biondii HOM05D006285 ORTHO05D007249 1.7e-14 83.6 82 54.9
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 1.7e-14 83.6 140 42.1
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 2.2e-14 83.2 138 39.9
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 3.7e-14 82.4 137 41.6
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 1.8e-13 80.1 142 42.3
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 2.4e-13 79.7 139 38.8
CDE02G4729 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 2.4e-13 79.7 138 38.4
CsaV3_4G002460 Cucumis sativus L. HOM05D006285 ORTHO05D007249 3.5e-12 75.9 143 38.5
Sc11g0000190 Simmondsia chinensis HOM05D006285 ORTHO05D007249 1.9e-10 70.1 138 35.5
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 3.3e-10 69.3 140 38.6
EL10Ac6g13588 Beta vulgaris HOM05D006285 ORTHO05D007249 3.3e-10 69.3 143 35.7
Ah.03g135710 Amaranthus hybridus HOM05D000002 ORTHO05D000047 9.5e-10 67.8 141 35.5
MELO3C017797.2 Cucumis melo HOM05D006285 ORTHO05D007249 1.6e-09 67.0 148 35.1
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 1.6e-09 67.0 143 40.6
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 4.7e-09 65.5 104 42.3
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 8.0e-09 64.7 143 39.9
Lsat_1_v5_gn_3_31461 Lactuca sativa HOM05D006285 ORTHO05D007249 3.1e-08 62.8 129 40.3
Nn6g35057 Nelumbo nucifera HOM05D006285 ORTHO05D007249 5.2e-08 62.0 33 90.9
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 8.9e-08 61.2 103 38.8
SalBow2G0692 Salvia bowleyana HOM05D006285 ORTHO05D007249 4.4e-07 58.9 138 31.9
ECA246G0706 Erigeron canadensis HOM05D006285 ORTHO05D007249 2.2e-06 56.6 141 33.3
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 2.2e-06 56.6 131 35.9
ECA233G3183 Erigeron canadensis HOM05D006285 ORTHO05D007249 2.9e-06 56.2 111 35.1
AUR62028862 Chenopodium quinoa HOM05D006285 ORTHO05D007249 4.9e-06 55.5 102 39.2


User provided reference genes

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